Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003999

Physical Location & Seq

Genomic Coordinates Forward (+)

11479907 .. 11482243

Gene Structure 2337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G079100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGTCTTCTTCTTCTTCAACAACTTATTCCTTGCCATTGGCAATCACATTTGTACTCTTAATGCTATATGTATCCAATGCTCAATTGAACACTACATTTTACTCTTCCACATGCCCAAATGTGACCACTATTGTCCGCAGTGTGGTTCAACAAGCTTTGCAATCTGACTCCAGGATTGGAGCTAGCCTTATTCGTCTTCATTTCCACGATTGCTTTGTCAACGGATGTGATGCTTCAATCTTGCTAGACAAGGGTGGGAGCATACAGCTGAGTGAGAAAGATGCAGCCCCAAACACCAACTCCACTCGAGGCTTTGATGTTGTTGACAACATCAAGACTGCTGTGGAAAATTCTTGCCCTGCTGTAGTATCTTGTGCTGACATTCTGGCCCTTGCTGCTGAAGCTTCTGTTTCTTTGTCAGGAGGTATTTCATGGAATGTATTACTGGGGAGAAGAGACAGTCTAACTGCAAACCAAGCTGGAGCCAACACCTCTATTCCCTCTCCTTTTGAAGGCTTAGCCAACATTACCTCCAAGTTTTCTGCTGTTGGCCTAAACACCAACGATCTTGTTGCATTATCTGGTGCACATACATTTGGGCGAGCTCAATGTCAAAGATTTAGCAACCGATTGTACAATTTCAATGGCACTGGCAATCCTGACCCAACTTTGAACTCTTCCTACTTGACCACTCTCCAGCAAACATGTCCACAGAATGGGAGTGGAACAGCTTTGGCCAACTTAGACCCCACAACTCCGGATAGCTTTGACAATAGCTACTTCAGCAACTTGCAGAACAATCAAGGTCTTCTGCAATCAGATCAGGAGTTGTTTTCGACGACCGGGGCTGCAACAGTTTCTATTGTTAATAGCTTTAGCAGCAACCAGAGTGCCTTCTTTCAGAGCTTTGCTCAGTCAATGATCAACATGGGAAATATTAGTCCATTGGTGGGAAGTAATGGGGAGATTAGGTTGGATTGTAAGAAGGTCAATGGAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002215 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0012505 GO:0016020 GO:0022414 GO:0031090 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0090567 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

334

Amino Acids

35.11

Weight (kDa)

4.95

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06720 AT5G06730
fragaria_vesca	FvH4_3g44360
malus_domestica	MD03G1014200.v1.1 MD03G1014400.v1.1 MD11G1015300.v1.1 MD12G1056000.v1.1
prunus_persica	Prupe.6G013500_v2.0.a1 Prupe.6G013600_v2.0.a1 Prupe.7G079100_v2.0.a1
pyrus_communis	pycom03g01180 pycom11g01070 pycom12g04890
rosa_chinensis	RchiOBHm_Chr5g0054001 RchiOBHm_Chr5g0080751 RchiOBHm_Chr5g0080861 RchiOBHm_Chr5g0080911
rosa_laevigata	RLG00000036891 RLG00000036897
rosa_multiflora	Rmu_sc0003177.1_g000004 Rmu_sc0003177.1_g000020
rosa_roxburghii	Rroxscaffold_1G00002590
rosa_rugosa	Rorug05G0472000
rosa_samantha	Rh5AG525400 Rh5BG547400 Rh5BG547900 Rh5CG570900 Rh5CG571400 Rh5DG557700
rosa_wichuraiana	Rw5G048710 Rw5G048720 Rw5G049270 Rw5G049300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccIII	TCCGGA	1 cut(s)	757
AciI	CCGC	1 cut(s)	136
AcoI	YGGCCR	1 cut(s)	735
AcsI	RAATTY	1 cut(s)	349
AcuI	CTGAAG	2 cut(s)	420, 766
AfaI	GTAC	2 cut(s)	54, 635
AfiI	CCNNNNNNNGG	4 cut(s)	142, 512, 716, 950
AflIII	ACRYGT	1 cut(s)	704
AgsI	TTSAA	7 cut(s)	18, 88, 149, 237, 512, 643, 673
AjnI	CCWGG	1 cut(s)	170
Alw21I	GWGCWC	2 cut(s)	589, 607
Alw26I	GTCTC	1 cut(s)	450
Alw44I	GTGCAC	1 cut(s)	585
Ama87I	CYCGRG	1 cut(s)	306
Aor13HI	TCCGGA	1 cut(s)	757
AoxI	GGCC	3 cut(s)	387, 550, 735
ApaLI	GTGCAC	1 cut(s)	585
ApeKI	GCWGC	4 cut(s)	284, 395, 848, 879
ApoI	RAATTY	1 cut(s)	349
AspS9I	GGNCC	1 cut(s)	388
AsuC2I	CCSGG	1 cut(s)	844
AsuNHI	GCTAGC	1 cut(s)	182
AvaI	CYCGRG	1 cut(s)	306
BaeGI	GKGCMC	1 cut(s)	589
BalI	TGGCCA	1 cut(s)	737
BanII	GRGCYC	1 cut(s)	607
BbsI	GAAGAC	2 cut(s)	188, 800
Bbv12I	GWGCWC	2 cut(s)	589, 607
BbvI	GCAGC	4 cut(s)	296, 382, 835, 891
BcgI	CGANNNNNNTGC	2 cut(s)	554, 588
BciT130I	CCWGG	1 cut(s)	172
BciVI	GTATCC	1 cut(s)	82
BclI	TGATCA	1 cut(s)	921
BcnI	CCSGG	1 cut(s)	844
BcoDI	GTCTC	1 cut(s)	450
BfaI	CTAG	2 cut(s)	183, 245
BfmI	CTRYAG	1 cut(s)	363
BfuI	GTATCC	1 cut(s)	82
BisI	GCNGC	4 cut(s)	285, 396, 849, 880
BlpI	GCTNAGC	1 cut(s)	517
BlsI	GCNGC	4 cut(s)	286, 397, 850, 881
Bme1390I	CCNGG	2 cut(s)	172, 844
BmeT110I	CYCGRG	1 cut(s)	306
BmgT120I	GGNCC	1 cut(s)	388
BmiI	GGNNCC	1 cut(s)	484
BmrFI	CCNGG	2 cut(s)	172, 844
BmrI	ACTGGG	1 cut(s)	455
BmsI	GCATC	2 cut(s)	220, 271
BmtI	GCTAGC	1 cut(s)	186
BmuI	ACTGGG	1 cut(s)	455
BpiI	GAAGAC	2 cut(s)	188, 800
BplI	GAGNNNNNCTC	2 cut(s)	895, 927
BpmI	CTGGAG	3 cut(s)	154, 501, 680
Bpu1102I	GCTNAGC	1 cut(s)	517
BpuMI	CCSGG	1 cut(s)	844
BsaJI	CCNNGG	1 cut(s)	843
BsaWI	WCCGGW	1 cut(s)	757
BsaXI	ACNNNNNCTCC	6 cut(s)	284, 314, 515, 545, 956, 986
Bsc4I	CCNNNNNNNGG	4 cut(s)	142, 512, 716, 950
Bse1I	ACTGG	2 cut(s)	450, 655
BseAI	TCCGGA	1 cut(s)	757
BseBI	CCWGG	1 cut(s)	172
BseDI	CCNNGG	1 cut(s)	843
BseGI	GGATG	1 cut(s)	230
BseLI	CCNNNNNNNGG	4 cut(s)	142, 512, 716, 950
BseMII	CTCAG	2 cut(s)	260, 926
BseNI	ACTGG	2 cut(s)	450, 655
BseSI	GKGCMC	1 cut(s)	589
BseXI	GCAGC	4 cut(s)	296, 382, 835, 891
Bsh1285I	CGRYCG	1 cut(s)	843
BshFI	GGCC	3 cut(s)	389, 552, 737
BsiEI	CGRYCG	1 cut(s)	843
BsiHKAI	GWGCWC	2 cut(s)	589, 607
BsiHKCI	CYCGRG	1 cut(s)	306
BsiSI	CCGG	2 cut(s)	758, 843
BslI	CCNNNNNNNGG	4 cut(s)	142, 512, 716, 950
BsmAI	GTCTC	1 cut(s)	450
BsnI	GGCC	3 cut(s)	389, 552, 737
BsoBI	CYCGRG	1 cut(s)	306
Bsp1286I	GDGCHC	2 cut(s)	589, 607
Bsp13I	TCCGGA	1 cut(s)	757
Bsp1407I	TGTACA	1 cut(s)	633
Bsp143I	GATC	3 cut(s)	565, 820, 921
Bsp1720I	GCTNAGC	1 cut(s)	517
BspACI	CCGC	1 cut(s)	136
BspANI	GGCC	3 cut(s)	389, 552, 737
BspCNI	CTCAG	2 cut(s)	261, 925
BspEI	TCCGGA	1 cut(s)	757
BspLI	GGNNCC	1 cut(s)	484
BspOI	GCTAGC	1 cut(s)	186
BsrGI	TGTACA	1 cut(s)	633
BsrI	ACTGG	2 cut(s)	450, 655
BssECI	CCNNGG	1 cut(s)	843
BssMI	GATC	3 cut(s)	565, 820, 921
Bst2UI	CCWGG	1 cut(s)	172
Bst4CI	ACNGT	2 cut(s)	461, 856
Bst6I	CTCTTC	3 cut(s)	109, 448, 682
BstAUI	TGTACA	1 cut(s)	633
BstC8I	GCNNGC	2 cut(s)	184, 603
BstDEI	CTNAG	4 cut(s)	269, 517, 742, 912
BstENI	CCTNNNNNAGG	1 cut(s)	510
BstF5I	GGATG	1 cut(s)	230
BstKTI	GATC	3 cut(s)	568, 823, 924
BstMAI	GTCTC	1 cut(s)	450
BstMBI	GATC	3 cut(s)	565, 820, 921
BstMCI	CGRYCG	1 cut(s)	843
BstMWI	GCNNNNNNNGC	5 cut(s)	395, 401, 476, 783, 879
BstNI	CCWGG	1 cut(s)	172
BstNSI	RCATGY	2 cut(s)	114, 708
BstSCI	CCNGG	2 cut(s)	170, 842
BstSFI	CTRYAG	1 cut(s)	363
BstSLI	GKGCMC	1 cut(s)	589
BstV1I	GCAGC	4 cut(s)	296, 382, 835, 891
BstV2I	GAAGAC	2 cut(s)	188, 800
BsuI	GTATCC	1 cut(s)	82
BsuRI	GGCC	3 cut(s)	389, 552, 737
BtsCI	GGATG	1 cut(s)	230
BtsI	GCAGTG	1 cut(s)	145
BtsIMutI	CAGTG	2 cut(s)	145, 648
Cac8I	GCNNGC	2 cut(s)	184, 603
Cfr13I	GGNCC	1 cut(s)	388
Csp6I	GTAC	2 cut(s)	53, 634
CviAII	CATG	4 cut(s)	111, 432, 705, 928
CviQI	GTAC	2 cut(s)	53, 634
DdeI	CTNAG	4 cut(s)	269, 517, 742, 912
DpnI	GATC	3 cut(s)	567, 822, 923
DpnII	GATC	3 cut(s)	565, 820, 921
EaeI	YGGCCR	1 cut(s)	735
Eam1104I	CTCTTC	3 cut(s)	109, 448, 682
EarI	CTCTTC	3 cut(s)	109, 448, 682
Ecl136II	GAGCTC	1 cut(s)	605
Eco24I	GRGCYC	1 cut(s)	607
Eco53kI	GAGCTC	1 cut(s)	605
Eco57I	CTGAAG	2 cut(s)	420, 766
Eco88I	CYCGRG	1 cut(s)	306
EcoICRI	GAGCTC	1 cut(s)	605
EcoNI	CCTNNNNNAGG	1 cut(s)	510
EcoRII	CCWGG	1 cut(s)	170
EcoT38I	GRGCYC	1 cut(s)	607
FaeI	CATG	4 cut(s)	114, 435, 708, 931
FaiI	YATR	8 cut(s)	67, 69, 112, 263, 433, 591, 706, 929
FatI	CATG	4 cut(s)	110, 431, 704, 927
FbaI	TGATCA	1 cut(s)	921
Fnu4HI	GCNGC	4 cut(s)	285, 396, 849, 880
FokI	GGATG	1 cut(s)	237
FriOI	GRGCYC	1 cut(s)	607
Fsp4HI	GCNGC	4 cut(s)	285, 396, 849, 880
FspBI	CTAG	2 cut(s)	183, 245
GluI	GCNGC	4 cut(s)	285, 396, 849, 880
GsuI	CTGGAG	3 cut(s)	154, 501, 680
HaeIII	GGCC	3 cut(s)	389, 552, 737
HapII	CCGG	2 cut(s)	758, 843
Hin1II	CATG	4 cut(s)	114, 435, 708, 931
HincII	GTYRAC	2 cut(s)	220, 325
HindII	GTYRAC	2 cut(s)	220, 325
HindIII	AAGCTT	2 cut(s)	153, 402
HinfI	GANTC	1 cut(s)	167
HpaII	CCGG	2 cut(s)	758, 843
Hpy166II	GTNNAC	4 cut(s)	220, 325, 587, 710
Hpy188I	TCNGA	3 cut(s)	166, 820, 903
Hpy188III	TCNNGA	5 cut(s)	334, 420, 659, 758, 824
Hpy8I	GTNNAC	4 cut(s)	220, 325, 587, 710
Hpy99I	CGWCG	1 cut(s)	841
HpyAV	CCTTC	3 cut(s)	506, 904, 979
HpyCH4III	ACNGT	2 cut(s)	461, 856
HpyCH4V	TGCA	8 cut(s)	160, 284, 470, 575, 587, 793, 814, 851
HpyF10VI	GCNNNNNNNGC	5 cut(s)	395, 401, 476, 783, 879
HpyF3I	CTNAG	4 cut(s)	269, 517, 742, 912
Hsp92II	CATG	4 cut(s)	114, 435, 708, 931
Kpn2I	TCCGGA	1 cut(s)	757
Ksp22I	TGATCA	1 cut(s)	921
Kzo9I	GATC	3 cut(s)	565, 820, 921
LmnI	GCTCC	3 cut(s)	179, 258, 482
Lsp1109I	GCAGC	4 cut(s)	296, 382, 835, 891
LweI	GCATC	2 cut(s)	220, 271
MaeI	CTAG	2 cut(s)	183, 245
MaeIII	GTNAC	1 cut(s)	121
MalI	GATC	3 cut(s)	567, 822, 923
MboI	GATC	3 cut(s)	565, 820, 921
MboII	GAAGA	7 cut(s)	3, 6, 96, 188, 465, 669, 800
MfeI	CAATTG	1 cut(s)	83
MhlI	GDGCHC	2 cut(s)	589, 607
MlsI	TGGCCA	1 cut(s)	737
MluCI	AATT	3 cut(s)	83, 349, 637
MluNI	TGGCCA	1 cut(s)	737
MlyI	GAGTC	1 cut(s)	161
MmeI	TCCRAC	1 cut(s)	954
MnlI	CCTC	6 cut(s)	302, 416, 502, 511, 541, 989
Mox20I	TGGCCA	1 cut(s)	737
MroI	TCCGGA	1 cut(s)	757
MscI	TGGCCA	1 cut(s)	737
MseI	TTAA	3 cut(s)	59, 867, 1000
Msp20I	TGGCCA	1 cut(s)	737
MspA1I	CMGCKG	1 cut(s)	268
MspI	CCGG	2 cut(s)	758, 843
MspR9I	CCNGG	2 cut(s)	172, 844
MunI	CAATTG	1 cut(s)	83
MvaI	CCWGG	1 cut(s)	172
MwoI	GCNNNNNNNGC	5 cut(s)	395, 401, 476, 783, 879
NciI	CCSGG	1 cut(s)	844
NdeII	GATC	3 cut(s)	565, 820, 921
NheI	GCTAGC	1 cut(s)	182
NlaIII	CATG	4 cut(s)	114, 435, 708, 931
NlaIV	GGNNCC	1 cut(s)	484
NmuCI	GTSAC	1 cut(s)	121
NspI	RCATGY	2 cut(s)	114, 708
PaeR7I	CTCGAG	1 cut(s)	306
PciI	ACATGT	1 cut(s)	704
PflMI	CCANNNNNTGG	1 cut(s)	716
PfoI	TCCNGGA	1 cut(s)	170
PkrI	GCNGC	4 cut(s)	286, 397, 850, 881
PleI	GAGTC	1 cut(s)	161
PpsI	GAGTC	1 cut(s)	161
PscI	ACATGT	1 cut(s)	704
Psp124BI	GAGCTC	1 cut(s)	607
Psp6I	CCWGG	1 cut(s)	170
PspGI	CCWGG	1 cut(s)	170
PspN4I	GGNNCC	1 cut(s)	484
PspPI	GGNCC	1 cut(s)	388
PspXI	VCTCGAGB	1 cut(s)	306
PsrI	GAACNNNNNNTAC	2 cut(s)	665, 697
PvuII	CAGCTG	1 cut(s)	268
RsaI	GTAC	2 cut(s)	54, 635
RsaNI	GTAC	2 cut(s)	53, 634
SacI	GAGCTC	1 cut(s)	607
SaqAI	TTAA	3 cut(s)	59, 867, 1000
SatI	GCNGC	4 cut(s)	285, 396, 849, 880
Sau3AI	GATC	3 cut(s)	565, 820, 921
Sau96I	GGNCC	1 cut(s)	388
SchI	GAGTC	1 cut(s)	161
ScrFI	CCNGG	2 cut(s)	172, 844
SduI	GDGCHC	2 cut(s)	589, 607
SfaNI	GCATC	2 cut(s)	220, 271
SfcI	CTRYAG	1 cut(s)	363
Sfr274I	CTCGAG	1 cut(s)	306
SlaI	CTCGAG	1 cut(s)	306
SmlI	CTYRAG	1 cut(s)	306
SmoI	CTYRAG	1 cut(s)	306
Sse9I	AATT	3 cut(s)	83, 349, 637
SsiI	CCGC	1 cut(s)	136
SspI	AATATT	1 cut(s)	937
SspMI	CTAG	2 cut(s)	183, 245
SstI	GAGCTC	1 cut(s)	607
StyD4I	CCNGG	2 cut(s)	170, 842
TaaI	ACNGT	2 cut(s)	461, 856
TaqI	TCGA	2 cut(s)	307, 836
TasI	AATT	3 cut(s)	83, 349, 637
TatI	WGTACW	2 cut(s)	52, 633
Tru1I	TTAA	3 cut(s)	59, 867, 1000
Tru9I	TTAA	3 cut(s)	59, 867, 1000
TscAI	CASTG	2 cut(s)	145, 655
TseFI	GTSAC	1 cut(s)	121
TseI	GCWGC	4 cut(s)	284, 395, 848, 879
Tsp45I	GTSAC	1 cut(s)	121
TspDTI	ATGAA	2 cut(s)	188, 420
TspGWI	ACGGA	1 cut(s)	237
TspRI	CASTG	2 cut(s)	145, 655
Van91I	CCANNNNNTGG	1 cut(s)	716
VneI	GTGCAC	1 cut(s)	585
XagI	CCTNNNNNAGG	1 cut(s)	510
XapI	RAATTY	1 cut(s)	349
XceI	RCATGY	2 cut(s)	114, 708
XhoI	CTCGAG	1 cut(s)	306
XspI	CTAG	2 cut(s)	183, 245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.