Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G06720 AT5G06730 |
| fragaria_vesca | FvH4_3g44360 |
| malus_domestica | MD03G1014200.v1.1 MD03G1014400.v1.1 MD11G1015300.v1.1 MD12G1056000.v1.1 |
| prunus_persica | Prupe.6G013500_v2.0.a1 Prupe.6G013600_v2.0.a1 Prupe.7G079100_v2.0.a1 |
| pyrus_communis | pycom03g01180 pycom11g01070 pycom12g04890 |
| rosa_chinensis | RchiOBHm_Chr5g0054001 RchiOBHm_Chr5g0080751 RchiOBHm_Chr5g0080861 RchiOBHm_Chr5g0080911 |
| rosa_laevigata | RLG00000036891 RLG00000036897 |
| rosa_multiflora | Rmu_sc0003177.1_g000004 Rmu_sc0003177.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00002590 |
| rosa_rugosa | Rorug05G0472000 |
| rosa_samantha | Rh5AG525400 Rh5BG547400 Rh5BG547900 Rh5CG570900 Rh5CG571400 Rh5DG557700 |
| rosa_wichuraiana | Rw5G048710 Rw5G048720 Rw5G049270 Rw5G049300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 239, 740 |
| AccI | GTMKAC | 1 cut(s) | 654 |
| AccII | CGCG | 3 cut(s) | 297, 549, 594 |
| AccIII | TCCGGA | 1 cut(s) | 448 |
| AclI | AACGTT | 1 cut(s) | 108 |
| AcsI | RAATTY | 3 cut(s) | 159, 279, 290 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 371, 506 |
| AgsI | TTSAA | 3 cut(s) | 405, 464, 526 |
| AjnI | CCWGG | 1 cut(s) | 115 |
| AluBI | AGCT | 4 cut(s) | 197, 236, 258, 693 |
| AluI | AGCT | 4 cut(s) | 197, 236, 258, 693 |
| Alw21I | GWGCWC | 1 cut(s) | 379 |
| Alw26I | GTCTC | 3 cut(s) | 130, 207, 630 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 619 |
| Aor13HI | TCCGGA | 1 cut(s) | 448 |
| AoxI | GGCC | 1 cut(s) | 182 |
| ApeKI | GCWGC | 1 cut(s) | 510 |
| ApoI | RAATTY | 3 cut(s) | 159, 279, 290 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 84, 116 |
| AspS9I | GGNCC | 2 cut(s) | 182, 451 |
| AsuHPI | GGTGA | 1 cut(s) | 407 |
| AvaII | GGWCC | 1 cut(s) | 451 |
| BanI | GGYRCC | 2 cut(s) | 239, 740 |
| Bbv12I | GWGCWC | 1 cut(s) | 379 |
| BbvI | GCAGC | 1 cut(s) | 522 |
| BceAI | ACGGC | 1 cut(s) | 523 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 23, 57 |
| BciT130I | CCWGG | 1 cut(s) | 117 |
| BciVI | GTATCC | 2 cut(s) | 62, 464 |
| BclI | TGATCA | 1 cut(s) | 708 |
| BcoDI | GTCTC | 3 cut(s) | 130, 207, 630 |
| BfaI | CTAG | 2 cut(s) | 345, 630 |
| BfuI | GTATCC | 2 cut(s) | 62, 464 |
| BisI | GCNGC | 2 cut(s) | 436, 511 |
| BlsI | GCNGC | 2 cut(s) | 437, 512 |
| Bme1390I | CCNGG | 1 cut(s) | 117 |
| Bme18I | GGWCC | 1 cut(s) | 451 |
| BmgT120I | GGNCC | 2 cut(s) | 182, 451 |
| BmiI | GGNNCC | 3 cut(s) | 241, 453, 742 |
| BmrFI | CCNGG | 1 cut(s) | 117 |
| BmsI | GCATC | 3 cut(s) | 31, 289, 541 |
| BpmI | CTGGAG | 1 cut(s) | 587 |
| BpuEI | CTTGAG | 1 cut(s) | 293 |
| BsaJI | CCNNGG | 2 cut(s) | 115, 592 |
| BsaWI | WCCGGW | 1 cut(s) | 448 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 627, 657 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 371, 506 |
| Bse1I | ACTGG | 3 cut(s) | 243, 445, 538 |
| BseAI | TCCGGA | 1 cut(s) | 448 |
| BseBI | CCWGG | 1 cut(s) | 117 |
| BseDI | CCNNGG | 2 cut(s) | 115, 592 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 371, 506 |
| BseNI | ACTGG | 3 cut(s) | 243, 445, 538 |
| BseXI | GCAGC | 1 cut(s) | 522 |
| Bsh1236I | CGCG | 3 cut(s) | 297, 549, 594 |
| Bsh1285I | CGRYCG | 1 cut(s) | 102 |
| BshFI | GGCC | 1 cut(s) | 184 |
| BshNI | GGYRCC | 2 cut(s) | 239, 740 |
| BsiEI | CGRYCG | 1 cut(s) | 102 |
| BsiHKAI | GWGCWC | 1 cut(s) | 379 |
| BsiSI | CCGG | 2 cut(s) | 449, 468 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 371, 506 |
| BsmAI | GTCTC | 3 cut(s) | 130, 207, 630 |
| BsnI | GGCC | 1 cut(s) | 184 |
| Bsp1286I | GDGCHC | 1 cut(s) | 379 |
| Bsp13I | TCCGGA | 1 cut(s) | 448 |
| Bsp143I | GATC | 3 cut(s) | 319, 610, 708 |
| Bsp68I | TCGCGA | 1 cut(s) | 297 |
| BspANI | GGCC | 1 cut(s) | 184 |
| BspEI | TCCGGA | 1 cut(s) | 448 |
| BspFNI | CGCG | 3 cut(s) | 297, 549, 594 |
| BspLI | GGNNCC | 3 cut(s) | 241, 453, 742 |
| BspT107I | GGYRCC | 2 cut(s) | 239, 740 |
| BsrI | ACTGG | 3 cut(s) | 243, 445, 538 |
| BssECI | CCNNGG | 2 cut(s) | 115, 592 |
| BssMI | GATC | 3 cut(s) | 319, 610, 708 |
| Bst2UI | CCWGG | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 4 cut(s) | 10, 16, 218, 643 |
| Bst6I | CTCTTC | 2 cut(s) | 205, 766 |
| BstC8I | GCNNGC | 3 cut(s) | 21, 25, 596 |
| BstDEI | CTNAG | 1 cut(s) | 370 |
| BstDSI | CCRYGG | 1 cut(s) | 592 |
| BstEII | GGTNACC | 1 cut(s) | 338 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 369 |
| BstFNI | CGCG | 3 cut(s) | 297, 549, 594 |
| BstKTI | GATC | 3 cut(s) | 322, 613, 711 |
| BstMAI | GTCTC | 3 cut(s) | 130, 207, 630 |
| BstMBI | GATC | 3 cut(s) | 319, 610, 708 |
| BstMCI | CGRYCG | 1 cut(s) | 102 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 233, 441 |
| BstNI | CCWGG | 1 cut(s) | 117 |
| BstNSI | RCATGY | 2 cut(s) | 23, 27 |
| BstPI | GGTNACC | 1 cut(s) | 338 |
| BstSCI | CCNGG | 1 cut(s) | 115 |
| BstUI | CGCG | 3 cut(s) | 297, 549, 594 |
| BstV1I | GCAGC | 1 cut(s) | 522 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 322 |
| BsuI | GTATCC | 2 cut(s) | 62, 464 |
| BsuRI | GGCC | 1 cut(s) | 184 |
| BtgI | CCRYGG | 1 cut(s) | 592 |
| BtgZI | GCGATG | 2 cut(s) | 312, 564 |
| BtsIMutI | CAGTG | 3 cut(s) | 250, 315, 438 |
| BtuMI | TCGCGA | 1 cut(s) | 297 |
| Cac8I | GCNNGC | 3 cut(s) | 21, 25, 596 |
| CaiI | CAGNNNCTG | 1 cut(s) | 619 |
| Cfr13I | GGNCC | 2 cut(s) | 182, 451 |
| Cfr42I | CCGCGG | 1 cut(s) | 595 |
| CviAII | CATG | 3 cut(s) | 20, 24, 706 |
| CviJI | RGCY | 9 cut(s) | 184, 197, 227, 236, 258, 467, 598, 672, 693 |
| CviKI_1 | RGCY | 9 cut(s) | 184, 197, 227, 236, 258, 467, 598, 672, 693 |
| DdeI | CTNAG | 1 cut(s) | 370 |
| DpnI | GATC | 3 cut(s) | 321, 612, 710 |
| DpnII | GATC | 3 cut(s) | 319, 610, 708 |
| Eam1104I | CTCTTC | 2 cut(s) | 205, 766 |
| EarI | CTCTTC | 2 cut(s) | 205, 766 |
| EciI | GGCGGA | 1 cut(s) | 476 |
| Eco32I | GATATC | 1 cut(s) | 88 |
| Eco47I | GGWCC | 1 cut(s) | 451 |
| Eco91I | GGTNACC | 1 cut(s) | 338 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 369 |
| EcoO65I | GGTNACC | 1 cut(s) | 338 |
| EcoRII | CCWGG | 1 cut(s) | 115 |
| EcoRV | GATATC | 1 cut(s) | 88 |
| EcoT22I | ATGCAT | 1 cut(s) | 25 |
| FaeI | CATG | 3 cut(s) | 23, 27, 709 |
| FaiI | YATR | 6 cut(s) | 21, 25, 381, 707, 716, 725 |
| FatI | CATG | 3 cut(s) | 19, 23, 705 |
| FauI | CCCGC | 2 cut(s) | 554, 587 |
| FbaI | TGATCA | 1 cut(s) | 708 |
| FblI | GTMKAC | 1 cut(s) | 654 |
| Fnu4HI | GCNGC | 2 cut(s) | 436, 511 |
| Fsp4HI | GCNGC | 2 cut(s) | 436, 511 |
| FspBI | CTAG | 2 cut(s) | 345, 630 |
| GluI | GCNGC | 2 cut(s) | 436, 511 |
| GsuI | CTGGAG | 1 cut(s) | 587 |
| HaeIII | GGCC | 1 cut(s) | 184 |
| HapII | CCGG | 2 cut(s) | 449, 468 |
| Hin1II | CATG | 3 cut(s) | 23, 27, 709 |
| HindIII | AAGCTT | 1 cut(s) | 256 |
| HinfI | GANTC | 1 cut(s) | 311 |
| HpaII | CCGG | 2 cut(s) | 449, 468 |
| HphI | GGTGA | 1 cut(s) | 407 |
| Hpy166II | GTNNAC | 3 cut(s) | 415, 543, 655 |
| Hpy188I | TCNGA | 1 cut(s) | 136 |
| Hpy188III | TCNNGA | 5 cut(s) | 103, 263, 296, 449, 604 |
| Hpy8I | GTNNAC | 3 cut(s) | 415, 543, 655 |
| Hpy99I | CGWCG | 1 cut(s) | 77 |
| HpyAV | CCTTC | 1 cut(s) | 565 |
| HpyCH4III | ACNGT | 4 cut(s) | 10, 16, 218, 643 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 108, 188, 521 |
| HpyCH4V | TGCA | 7 cut(s) | 19, 23, 27, 44, 302, 665, 768 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 233, 441 |
| HpyF3I | CTNAG | 1 cut(s) | 370 |
| HpySE526I | ACGT | 4 cut(s) | 75, 108, 188, 521 |
| Hsp92II | CATG | 3 cut(s) | 23, 27, 709 |
| Kpn2I | TCCGGA | 1 cut(s) | 448 |
| Ksp22I | TGATCA | 1 cut(s) | 708 |
| KspI | CCGCGG | 1 cut(s) | 595 |
| Kzo9I | GATC | 3 cut(s) | 319, 610, 708 |
| LmnI | GCTCC | 1 cut(s) | 30 |
| Lsp1109I | GCAGC | 1 cut(s) | 522 |
| LweI | GCATC | 3 cut(s) | 31, 289, 541 |
| MaeI | CTAG | 2 cut(s) | 345, 630 |
| MaeII | ACGT | 4 cut(s) | 75, 108, 188, 521 |
| MaeIII | GTNAC | 4 cut(s) | 4, 10, 338, 677 |
| MalI | GATC | 3 cut(s) | 321, 612, 710 |
| MboI | GATC | 3 cut(s) | 319, 610, 708 |
| MboII | GAAGA | 3 cut(s) | 219, 222, 783 |
| MfeI | CAATTG | 2 cut(s) | 147, 200 |
| MhlI | GDGCHC | 1 cut(s) | 379 |
| MluCI | AATT | 7 cut(s) | 147, 159, 200, 279, 290, 427, 778 |
| MnlI | CCTC | 5 cut(s) | 57, 173, 431, 494, 510 |
| Mph1103I | ATGCAT | 1 cut(s) | 25 |
| MroI | TCCGGA | 1 cut(s) | 448 |
| MseI | TTAA | 2 cut(s) | 777, 781 |
| MspA1I | CMGCKG | 3 cut(s) | 435, 513, 594 |
| MspI | CCGG | 2 cut(s) | 449, 468 |
| MspR9I | CCNGG | 1 cut(s) | 117 |
| MunI | CAATTG | 2 cut(s) | 147, 200 |
| MvaI | CCWGG | 1 cut(s) | 117 |
| MvnI | CGCG | 3 cut(s) | 297, 549, 594 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 233, 441 |
| NdeII | GATC | 3 cut(s) | 319, 610, 708 |
| NlaIII | CATG | 3 cut(s) | 23, 27, 709 |
| NlaIV | GGNNCC | 3 cut(s) | 241, 453, 742 |
| NmuCI | GTSAC | 1 cut(s) | 677 |
| NruI | TCGCGA | 1 cut(s) | 297 |
| NsiI | ATGCAT | 1 cut(s) | 25 |
| NspI | RCATGY | 2 cut(s) | 23, 27 |
| PacI | TTAATTAA | 1 cut(s) | 781 |
| PaeI | GCATGC | 2 cut(s) | 23, 27 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 72 |
| PfeI | GAWTC | 1 cut(s) | 311 |
| PkrI | GCNGC | 2 cut(s) | 437, 512 |
| Psp1406I | AACGTT | 1 cut(s) | 108 |
| Psp6I | CCWGG | 1 cut(s) | 115 |
| PspEI | GGTNACC | 1 cut(s) | 338 |
| PspGI | CCWGG | 1 cut(s) | 115 |
| PspN4I | GGNNCC | 3 cut(s) | 241, 453, 742 |
| PspPI | GGNCC | 2 cut(s) | 182, 451 |
| PstNI | CAGNNNCTG | 1 cut(s) | 619 |
| RruI | TCGCGA | 1 cut(s) | 297 |
| SacII | CCGCGG | 1 cut(s) | 595 |
| SaqAI | TTAA | 2 cut(s) | 777, 781 |
| SatI | GCNGC | 2 cut(s) | 436, 511 |
| Sau3AI | GATC | 3 cut(s) | 319, 610, 708 |
| Sau96I | GGNCC | 2 cut(s) | 182, 451 |
| ScrFI | CCNGG | 1 cut(s) | 117 |
| SduI | GDGCHC | 1 cut(s) | 379 |
| SfaNI | GCATC | 3 cut(s) | 31, 289, 541 |
| Sfr303I | CCGCGG | 1 cut(s) | 595 |
| SgrBI | CCGCGG | 1 cut(s) | 595 |
| SinI | GGWCC | 1 cut(s) | 451 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| SphI | GCATGC | 2 cut(s) | 23, 27 |
| Sse9I | AATT | 7 cut(s) | 147, 159, 200, 279, 290, 427, 778 |
| SspMI | CTAG | 2 cut(s) | 345, 630 |
| StyD4I | CCNGG | 1 cut(s) | 115 |
| TaaI | ACNGT | 4 cut(s) | 10, 16, 218, 643 |
| TaiI | ACGT | 4 cut(s) | 78, 111, 191, 524 |
| TaqI | TCGA | 4 cut(s) | 59, 102, 264, 558 |
| TaqII | GACCGA | 1 cut(s) | 623 |
| TasI | AATT | 7 cut(s) | 147, 159, 200, 279, 290, 427, 778 |
| TauI | GCSGC | 1 cut(s) | 438 |
| TfiI | GAWTC | 1 cut(s) | 311 |
| Tru1I | TTAA | 2 cut(s) | 777, 781 |
| Tru9I | TTAA | 2 cut(s) | 777, 781 |
| TscAI | CASTG | 3 cut(s) | 250, 322, 445 |
| TseFI | GTSAC | 1 cut(s) | 677 |
| TseI | GCWGC | 1 cut(s) | 510 |
| Tsp45I | GTSAC | 1 cut(s) | 677 |
| TspGWI | ACGGA | 1 cut(s) | 81 |
| TspRI | CASTG | 3 cut(s) | 250, 322, 445 |
| VpaK11BI | GGWCC | 1 cut(s) | 451 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 369 |
| XapI | RAATTY | 3 cut(s) | 159, 279, 290 |
| XceI | RCATGY | 2 cut(s) | 23, 27 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 712 |
| XmiI | GTMKAC | 1 cut(s) | 654 |
| XspI | CTAG | 2 cut(s) | 345, 630 |
| Zsp2I | ATGCAT | 1 cut(s) | 25 |