Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002391

Physical Location & Seq

Genomic Coordinates Reverse (-)

13124675 .. 13129660

Gene Structure 4986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G101100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGTCTCAGACGGGGAAATTGATGCCAAATCTCGATCAGCAAAGCACCAAAATGCTCAATCTCACGGTGCTGCAGAGAATCGATCCCTTCATCGAAGAGATTCTGATTACGGCCGCGCATGTAACCTTCTACGAATTCAACATCGAGAGCAATCAATGGAGTCGCAAGGATGTTGAAGGGTCTCTCTTTGTTGTTAAAAGGAATACTCAACCACGGTTCCAGTTCATTGTAATGAATCGGCGTAATACAGATAACCTAGTGGAGAATCTCTTGGGAGATTTTGAGTATGAAGTACAAGTTCCATATTTGTTGTATAGGAATGCAGCCCAAGAAGTTAATGGAATTTGGTTTTATAATCCCCGTGAATGTGAGGAAGTTGCAAATCTCTTTACTAGGATCCTTAATGCATACTCAAAGGTTCCTCCAAAGTCCAAAGTAGCTTCAAGCAAAAGCGAGTTTGAAGAACTTGAAGCAGTCCCATCCATGTTGGTCATGGAGGGGCCACTGGAGCCATCTTTGAATGCCTCTACTGCCACTGATGCCCCTGAAGATTCTTCCTTTGTGAACTACCTGGCAGCTATGAATATTGGAGGTAATACTACAAACCCAACAAATTCAAGACAGGCCTATCATTCTGCTGGAACTGTTCCAGCGTCTTCCTATGCACCCAGTGCTGTTTCACCTCCTGCACCAACTCCACAACCACCACCCCTTTCCCTTTCAGTCCCATCTACGCCAACCCCCCAGCATGTCCCCTCTGATCTAACCACCAGCAACAATCGAGTCACTAATCTTATAAAGCCCTCTTCTTTCTTCCCTCTCCCTGCTTCTTCATCTTCGTTGATTATACCACCTGTTGCTTCAGCTGTGCCAACTGCTGCCGCACTTCATCCTCCCCTGAATCTGCAACGCCCTTATGGTACTCCAATGCTTCAACCCTTTCCACCACCGACGCCCCCACCATCTTTAACTCCAAATTCTGCTCCTCTGGCTCCCAATGATGGGCCTCTTATTAACAGAGAAAAAGTTCGCGAAGCACTGCTGATGCTGGTTCAGGACGACCAATTCATCGACATGTTATACCAAGCATTGCTGAAAGTGCACCATACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

DCP1

Protein Analysis

371

Amino Acids

40.71

Weight (kDa)

5.32

Isoelectric Point (pI)

58.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002391)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08370
fragaria_vesca	FvH4_3g25640 FvH4_6g19510 FvH4_6g19510 FvH4_6g19510 FvH4_6g19510 FvH4_6g19510
malus_domestica	MD03G1149600.v1.1 MD11G1168500.v1.1 MD12G1031300.v1.1 MD14G1031700.v1.1
prunus_persica	Prupe.6G135600_v2.0.a1 Prupe.6G135600_v2.0.a1 Prupe.7G101100_v2.0.a1
pyrus_communis	pycom03g10350 pycom11g14120 pycom12g02930 pycom14g02860
rosa_chinensis	RchiOBHm_Chr3g0474851 RchiOBHm_Chr5g0045761 RchiOBHm_Chr5g0045791
rosa_laevigata	RLG00000023890 RLG00000034405
rosa_multiflora	Rmu_sc0003677.1_g000002 Rmu_sc0004848.1_g000015 Rmu_sc0011900.1_g000003
rosa_roxburghii	Rroxscaffold_1G00035080 Rroxscaffold_6G00406800
rosa_rugosa	Rorug03G0144600 Rorug05G0227000
rosa_samantha	Rh2BG361200 Rh3AG194100 Rh3BG224000 Rh3CG218900 Rh3DG219900 Rh5AG308000 Rh5BG316800 Rh5CG342700 Rh5CG342800 Rh5DG327100
rosa_wichuraiana	Rw3G017680 Rw5G028850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	354, 797
AccII	CGCG	2 cut(s)	116, 1032
AciI	CCGC	2 cut(s)	114, 882
AclWI	GGATC	3 cut(s)	77, 391, 404
AcoI	YGGCCR	1 cut(s)	111
AcsI	RAATTY	4 cut(s)	134, 342, 613, 976
AcuI	CTGAAG	2 cut(s)	567, 846
AcyI	GRCGYC	1 cut(s)	953
AdeI	CACNNNGTG	1 cut(s)	671
AfaI	GTAC	2 cut(s)	294, 922
AfiI	CCNNNNNNNGG	2 cut(s)	1001, 1002
AflIII	ACRYGT	1 cut(s)	1074
AgsI	TTSAA	8 cut(s)	139, 176, 444, 461, 470, 520, 618, 935
AjnI	CCWGG	1 cut(s)	570
AluBI	AGCT	3 cut(s)	440, 578, 866
AluI	AGCT	3 cut(s)	440, 578, 866
Alw21I	GWGCWC	1 cut(s)	1104
Alw26I	GTCTC	2 cut(s)	9, 186
Alw44I	GTGCAC	1 cut(s)	1100
AlwI	GGATC	3 cut(s)	77, 391, 404
AoxI	GGCC	4 cut(s)	111, 500, 624, 1004
ApaLI	GTGCAC	1 cut(s)	1100
ApeKI	GCWGC	4 cut(s)	70, 323, 575, 878
ApoI	RAATTY	4 cut(s)	134, 342, 613, 976
Asp700I	GAANNNNTTC	2 cut(s)	99, 1026
AspLEI	GCGC	1 cut(s)	118
AspS9I	GGNCC	2 cut(s)	500, 1004
AsuHPI	GGTGA	1 cut(s)	672
BaeGI	GKGCMC	1 cut(s)	1104
BamHI	GGATCC	1 cut(s)	396
BbsI	GAAGAC	1 cut(s)	648
Bbv12I	GWGCWC	1 cut(s)	1104
BbvI	GCAGC	4 cut(s)	57, 335, 587, 865
BccI	CCATC	5 cut(s)	487, 520, 736, 970, 995
BceAI	ACGGC	1 cut(s)	126
BciT130I	CCWGG	1 cut(s)	572
BcoDI	GTCTC	2 cut(s)	9, 186
BfaI	CTAG	2 cut(s)	257, 393
BfmI	CTRYAG	1 cut(s)	71
BisI	GCNGC	6 cut(s)	71, 114, 324, 576, 879, 882
BlsI	GCNGC	6 cut(s)	72, 115, 325, 577, 880, 883
Bme1390I	CCNGG	1 cut(s)	572
BmgT120I	GGNCC	2 cut(s)	500, 1004
BmiI	GGNNCC	6 cut(s)	218, 398, 420, 501, 510, 993
BmrFI	CCNGG	1 cut(s)	572
BmrI	ACTGGG	1 cut(s)	663
BmsI	GCATC	3 cut(s)	12, 529, 1035
BmuI	ACTGGG	1 cut(s)	663
BpiI	GAAGAC	1 cut(s)	648
BpmI	CTGGAG	1 cut(s)	527
Bsa29I	ATCGAT	1 cut(s)	81
BsaHI	GRCGYC	1 cut(s)	953
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	1 cut(s)	212
Bsc4I	CCNNNNNNNGG	2 cut(s)	1001, 1002
Bse1I	ACTGG	3 cut(s)	220, 510, 669
Bse3DI	GCAATG	1 cut(s)	1088
BseBI	CCWGG	1 cut(s)	572
BseCI	ATCGAT	1 cut(s)	81
BseDI	CCNNGG	1 cut(s)	212
BseGI	GGATG	3 cut(s)	175, 479, 889
BseLI	CCNNNNNNNGG	2 cut(s)	1001, 1002
BseMI	GCAATG	1 cut(s)	1088
BseMII	CTCAG	1 cut(s)	20
BseNI	ACTGG	3 cut(s)	220, 510, 669
BseRI	GAGGAG	1 cut(s)	975
BseSI	GKGCMC	1 cut(s)	1104
BseX3I	CGGCCG	1 cut(s)	111
BseXI	GCAGC	4 cut(s)	57, 335, 587, 865
BseYI	CCCAGC	1 cut(s)	744
BsgI	GTGCAG	1 cut(s)	672
Bsh1236I	CGCG	2 cut(s)	116, 1032
Bsh1285I	CGRYCG	1 cut(s)	114
BshFI	GGCC	4 cut(s)	113, 502, 626, 1006
BshVI	ATCGAT	1 cut(s)	81
BsiEI	CGRYCG	1 cut(s)	114
BsiHKAI	GWGCWC	1 cut(s)	1104
BslFI	GGGAC	3 cut(s)	461, 710, 737
BslI	CCNNNNNNNGG	2 cut(s)	1001, 1002
BsmAI	GTCTC	2 cut(s)	9, 186
BsmFI	GGGAC	3 cut(s)	461, 710, 737
BsmI	GAATGC	2 cut(s)	325, 526
BsnI	GGCC	4 cut(s)	113, 502, 626, 1006
Bso31I	GGTCTC	1 cut(s)	186
Bsp1286I	GDGCHC	1 cut(s)	1104
Bsp143I	GATC	4 cut(s)	34, 82, 396, 760
Bsp68I	TCGCGA	1 cut(s)	1032
BspACI	CCGC	2 cut(s)	114, 882
BspANI	GGCC	4 cut(s)	113, 502, 626, 1006
BspCNI	CTCAG	1 cut(s)	19
BspDI	ATCGAT	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	116, 1032
BspLI	GGNNCC	6 cut(s)	218, 398, 420, 501, 510, 993
BspMAI	CTGCAG	1 cut(s)	75
BspPI	GGATC	3 cut(s)	77, 391, 404
BspTNI	GGTCTC	1 cut(s)	186
BsrDI	GCAATG	1 cut(s)	1088
BsrI	ACTGG	3 cut(s)	220, 510, 669
BssECI	CCNNGG	1 cut(s)	212
BssMI	GATC	4 cut(s)	34, 82, 396, 760
BssNI	GRCGYC	1 cut(s)	953
Bst2UI	CCWGG	1 cut(s)	572
Bst4CI	ACNGT	3 cut(s)	67, 216, 646
Bst6I	CTCTTC	2 cut(s)	90, 811
BstACI	GRCGYC	1 cut(s)	953
BstAPI	GCANNNNNTGC	1 cut(s)	671
BstDEI	CTNAG	1 cut(s)	6
BstDSI	CCRYGG	1 cut(s)	212
BstF5I	GGATG	3 cut(s)	175, 479, 889
BstFNI	CGCG	2 cut(s)	116, 1032
BstHHI	GCGC	1 cut(s)	118
BstKTI	GATC	4 cut(s)	37, 85, 399, 763
BstMAI	GTCTC	2 cut(s)	9, 186
BstMBI	GATC	4 cut(s)	34, 82, 396, 760
BstMCI	CGRYCG	1 cut(s)	114
BstMWI	GCNNNNNNNGC	6 cut(s)	508, 530, 539, 671, 989, 1099
BstNI	CCWGG	1 cut(s)	572
BstNSI	RCATGY	3 cut(s)	122, 752, 1078
BstSCI	CCNGG	1 cut(s)	570
BstSFI	CTRYAG	1 cut(s)	71
BstSLI	GKGCMC	1 cut(s)	1104
BstUI	CGCG	2 cut(s)	116, 1032
BstV1I	GCAGC	4 cut(s)	57, 335, 587, 865
BstV2I	GAAGAC	1 cut(s)	648
BstX2I	RGATCY	1 cut(s)	396
BstYI	RGATCY	1 cut(s)	396
BstZI	CGGCCG	1 cut(s)	111
Bsu15I	ATCGAT	1 cut(s)	81
BsuRI	GGCC	4 cut(s)	113, 502, 626, 1006
BsuTUI	ATCGAT	1 cut(s)	81
BtgI	CCRYGG	1 cut(s)	212
BtsCI	GGATG	3 cut(s)	175, 479, 889
BtsI	GCAGTG	1 cut(s)	1037
BtsIMutI	CAGTG	4 cut(s)	503, 534, 676, 1037
BtuMI	TCGCGA	1 cut(s)	1032
CfoI	GCGC	1 cut(s)	118
Cfr13I	GGNCC	2 cut(s)	500, 1004
ClaI	ATCGAT	1 cut(s)	81
CseI	GACGC	2 cut(s)	642, 961
Csp6I	GTAC	2 cut(s)	293, 921
CviAII	CATG	6 cut(s)	119, 484, 493, 749, 1075, 1110
CviQI	GTAC	2 cut(s)	293, 921
DdeI	CTNAG	1 cut(s)	6
DpnI	GATC	4 cut(s)	36, 84, 398, 762
DpnII	GATC	4 cut(s)	34, 82, 396, 760
DraIII	CACNNNGTG	1 cut(s)	671
EaeI	YGGCCR	1 cut(s)	111
EagI	CGGCCG	1 cut(s)	111
Eam1104I	CTCTTC	2 cut(s)	90, 811
EarI	CTCTTC	2 cut(s)	90, 811
EclXI	CGGCCG	1 cut(s)	111
Eco147I	AGGCCT	1 cut(s)	626
Eco31I	GGTCTC	1 cut(s)	186
Eco52I	CGGCCG	1 cut(s)	111
Eco57I	CTGAAG	2 cut(s)	567, 846
EcoRI	GAATTC	1 cut(s)	134
EcoRII	CCWGG	1 cut(s)	570
EcoT22I	ATGCAT	1 cut(s)	409
FaeI	CATG	6 cut(s)	122, 487, 496, 752, 1078, 1113
FaqI	GGGAC	3 cut(s)	461, 710, 737
FatI	CATG	6 cut(s)	118, 483, 492, 748, 1074, 1109
Fnu4HI	GCNGC	6 cut(s)	71, 114, 324, 576, 879, 882
FokI	GGATG	3 cut(s)	182, 466, 876
Fsp4HI	GCNGC	6 cut(s)	71, 114, 324, 576, 879, 882
FspBI	CTAG	2 cut(s)	257, 393
GlaI	GCGC	1 cut(s)	117
GluI	GCNGC	6 cut(s)	71, 114, 324, 576, 879, 882
GsaI	CCCAGC	1 cut(s)	748
GsuI	CTGGAG	1 cut(s)	527
HaeIII	GGCC	4 cut(s)	113, 502, 626, 1006
HgaI	GACGC	2 cut(s)	642, 961
HhaI	GCGC	1 cut(s)	118
Hin1I	GRCGYC	1 cut(s)	953
Hin1II	CATG	6 cut(s)	122, 487, 496, 752, 1078, 1113
Hin6I	GCGC	1 cut(s)	116
HinP1I	GCGC	1 cut(s)	116
HinfI	GANTC	8 cut(s)	78, 100, 160, 235, 265, 551, 783, 901
HphI	GGTGA	1 cut(s)	672
Hpy166II	GTNNAC	2 cut(s)	565, 1102
Hpy188I	TCNGA	3 cut(s)	9, 105, 760
Hpy188III	TCNNGA	5 cut(s)	32, 145, 618, 1031, 1055
Hpy8I	GTNNAC	2 cut(s)	565, 1102
Hpy99I	CGWCG	1 cut(s)	955
HpyAV	CCTTC	3 cut(s)	97, 136, 170
HpyCH4III	ACNGT	3 cut(s)	67, 216, 646
HpyCH4V	TGCA	8 cut(s)	73, 323, 380, 407, 665, 689, 907, 1102
HpyF10VI	GCNNNNNNNGC	6 cut(s)	508, 530, 539, 671, 989, 1099
HpyF3I	CTNAG	1 cut(s)	6
Hsp92I	GRCGYC	1 cut(s)	953
Hsp92II	CATG	6 cut(s)	122, 487, 496, 752, 1078, 1113
HspAI	GCGC	1 cut(s)	116
Kzo9I	GATC	4 cut(s)	34, 82, 396, 760
LmnI	GCTCC	3 cut(s)	508, 988, 997
Lsp1109I	GCAGC	4 cut(s)	57, 335, 587, 865
LweI	GCATC	3 cut(s)	12, 529, 1035
MaeI	CTAG	2 cut(s)	257, 393
MaeIII	GTNAC	2 cut(s)	121, 784
MalI	GATC	4 cut(s)	36, 84, 398, 762
MboI	GATC	4 cut(s)	34, 82, 396, 760
MboII	GAAGA	9 cut(s)	107, 473, 546, 560, 648, 798, 805, 822, 828
MflI	RGATCY	1 cut(s)	396
MhlI	GDGCHC	1 cut(s)	1104
MluCI	AATT	6 cut(s)	17, 134, 342, 613, 976, 1064
MlyI	GAGTC	2 cut(s)	169, 792
Mph1103I	ATGCAT	1 cut(s)	409
MroXI	GAANNNNTTC	2 cut(s)	99, 1026
MseI	TTAA	5 cut(s)	195, 336, 402, 968, 1014
MslI	CAYNNNNRTG	3 cut(s)	50, 230, 1073
MspA1I	CMGCKG	1 cut(s)	866
MspR9I	CCNGG	1 cut(s)	572
Mva1269I	GAATGC	2 cut(s)	325, 526
MvaI	CCWGG	1 cut(s)	572
MvnI	CGCG	2 cut(s)	116, 1032
MwoI	GCNNNNNNNGC	6 cut(s)	508, 530, 539, 671, 989, 1099
NdeII	GATC	4 cut(s)	34, 82, 396, 760
NlaIII	CATG	6 cut(s)	122, 487, 496, 752, 1078, 1113
NlaIV	GGNNCC	6 cut(s)	218, 398, 420, 501, 510, 993
NmuCI	GTSAC	1 cut(s)	784
NruI	TCGCGA	1 cut(s)	1032
NsiI	ATGCAT	1 cut(s)	409
NspI	RCATGY	3 cut(s)	122, 752, 1078
PceI	AGGCCT	1 cut(s)	626
PciI	ACATGT	1 cut(s)	1074
PctI	GAATGC	2 cut(s)	325, 526
PdmI	GAANNNNTTC	2 cut(s)	99, 1026
PfeI	GAWTC	6 cut(s)	78, 100, 235, 265, 551, 901
PkrI	GCNGC	6 cut(s)	72, 115, 325, 577, 880, 883
PleI	GAGTC	2 cut(s)	168, 791
PpsI	GAGTC	2 cut(s)	168, 791
PscI	ACATGT	1 cut(s)	1074
PsiI	TTATAA	2 cut(s)	354, 797
Psp6I	CCWGG	1 cut(s)	570
PspFI	CCCAGC	1 cut(s)	744
PspGI	CCWGG	1 cut(s)	570
PspN4I	GGNNCC	6 cut(s)	218, 398, 420, 501, 510, 993
PspPI	GGNCC	2 cut(s)	500, 1004
PstI	CTGCAG	1 cut(s)	75
PsuI	RGATCY	1 cut(s)	396
PvuII	CAGCTG	1 cut(s)	866
RruI	TCGCGA	1 cut(s)	1032
RsaI	GTAC	2 cut(s)	294, 922
RsaNI	GTAC	2 cut(s)	293, 921
RseI	CAYNNNNRTG	3 cut(s)	50, 230, 1073
SaqAI	TTAA	5 cut(s)	195, 336, 402, 968, 1014
SatI	GCNGC	6 cut(s)	71, 114, 324, 576, 879, 882
Sau3AI	GATC	4 cut(s)	34, 82, 396, 760
Sau96I	GGNCC	2 cut(s)	500, 1004
SchI	GAGTC	2 cut(s)	169, 792
ScrFI	CCNGG	1 cut(s)	572
SduI	GDGCHC	1 cut(s)	1104
SfaNI	GCATC	3 cut(s)	12, 529, 1035
SfcI	CTRYAG	1 cut(s)	71
SmiMI	CAYNNNNRTG	3 cut(s)	50, 230, 1073
Sse9I	AATT	6 cut(s)	17, 134, 342, 613, 976, 1064
SseBI	AGGCCT	1 cut(s)	626
SsiI	CCGC	2 cut(s)	114, 882
SspI	AATATT	1 cut(s)	586
SspMI	CTAG	2 cut(s)	257, 393
StuI	AGGCCT	1 cut(s)	626
StyD4I	CCNGG	1 cut(s)	570
TaaI	ACNGT	3 cut(s)	67, 216, 646
TaqI	TCGA	6 cut(s)	33, 81, 93, 144, 781, 1071
TasI	AATT	6 cut(s)	17, 134, 342, 613, 976, 1064
TatI	WGTACW	1 cut(s)	292
TauI	GCSGC	2 cut(s)	116, 884
TfiI	GAWTC	6 cut(s)	78, 100, 235, 265, 551, 901
Tru1I	TTAA	5 cut(s)	195, 336, 402, 968, 1014
Tru9I	TTAA	5 cut(s)	195, 336, 402, 968, 1014
TscAI	CASTG	4 cut(s)	510, 541, 676, 1044
TseFI	GTSAC	1 cut(s)	784
TseI	GCWGC	4 cut(s)	70, 323, 575, 878
Tsp45I	GTSAC	1 cut(s)	784
TspDTI	ATGAA	8 cut(s)	79, 214, 248, 303, 596, 822, 878, 1057
TspRI	CASTG	4 cut(s)	510, 541, 676, 1044
VneI	GTGCAC	1 cut(s)	1100
XapI	RAATTY	4 cut(s)	134, 342, 613, 976
XceI	RCATGY	3 cut(s)	122, 752, 1078
XcmI	CCANNNNNNNNNTGG	2 cut(s)	335, 490
XmnI	GAANNNNTTC	2 cut(s)	99, 1026
XspI	CTAG	2 cut(s)	257, 393
Zsp2I	ATGCAT	1 cut(s)	409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.