mRNA-decapping enzyme-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08370 |
| fragaria_vesca | FvH4_3g25640 FvH4_6g19510 FvH4_6g19510 FvH4_6g19510 FvH4_6g19510 FvH4_6g19510 |
| malus_domestica | MD03G1149600.v1.1 MD11G1168500.v1.1 MD12G1031300.v1.1 MD14G1031700.v1.1 |
| prunus_persica | Prupe.6G135600_v2.0.a1 Prupe.6G135600_v2.0.a1 Prupe.7G101100_v2.0.a1 |
| pyrus_communis | pycom03g10350 pycom11g14120 pycom12g02930 pycom14g02860 |
| rosa_chinensis | RchiOBHm_Chr3g0474851 RchiOBHm_Chr5g0045761 RchiOBHm_Chr5g0045791 |
| rosa_laevigata | RLG00000023890 RLG00000034405 |
| rosa_multiflora | Rmu_sc0003677.1_g000002 Rmu_sc0004848.1_g000015 Rmu_sc0011900.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00035080 Rroxscaffold_6G00406800 |
| rosa_rugosa | Rorug03G0144600 Rorug05G0227000 |
| rosa_samantha | Rh2BG361200 Rh3AG194100 Rh3BG224000 Rh3CG218900 Rh3DG219900 Rh5AG308000 Rh5BG316800 Rh5CG342700 Rh5CG342800 Rh5DG327100 |
| rosa_wichuraiana | Rw3G017680 Rw5G028850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 124 |
| AclWI | GGATC | 1 cut(s) | 60 |
| AcsI | RAATTY | 1 cut(s) | 139 |
| AfaI | GTAC | 1 cut(s) | 157 |
| AflIII | ACRYGT | 1 cut(s) | 152 |
| AgsI | TTSAA | 2 cut(s) | 144, 178 |
| Alw21I | GWGCWC | 1 cut(s) | 65 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| AlwI | GGATC | 1 cut(s) | 60 |
| AoxI | GGCC | 1 cut(s) | 21 |
| ApoI | RAATTY | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 1 cut(s) | 120 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 93, 126 |
| Bbv12I | GWGCWC | 1 cut(s) | 65 |
| BccI | CCATC | 1 cut(s) | 92 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BmsI | GCATC | 1 cut(s) | 30 |
| BpmI | CTGGAG | 1 cut(s) | 74 |
| Bsa29I | ATCGAT | 1 cut(s) | 99 |
| BsaI | GGTCTC | 1 cut(s) | 110 |
| BseCI | ATCGAT | 1 cut(s) | 99 |
| BseGI | GGATG | 1 cut(s) | 84 |
| BshFI | GGCC | 1 cut(s) | 23 |
| BshVI | ATCGAT | 1 cut(s) | 99 |
| BsiHKAI | GWGCWC | 1 cut(s) | 65 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| BsnI | GGCC | 1 cut(s) | 23 |
| Bso31I | GGTCTC | 1 cut(s) | 110 |
| Bsp1286I | GDGCHC | 1 cut(s) | 65 |
| Bsp143I | GATC | 1 cut(s) | 52 |
| BspANI | GGCC | 1 cut(s) | 23 |
| BspDI | ATCGAT | 1 cut(s) | 99 |
| BspPI | GGATC | 1 cut(s) | 60 |
| BspTNI | GGTCTC | 1 cut(s) | 110 |
| BssMI | GATC | 1 cut(s) | 52 |
| Bst4CI | ACNGT | 1 cut(s) | 11 |
| Bst6I | CTCTTC | 1 cut(s) | 108 |
| BstF5I | GGATG | 1 cut(s) | 84 |
| BstKTI | GATC | 1 cut(s) | 55 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMBI | GATC | 1 cut(s) | 52 |
| BstNSI | RCATGY | 1 cut(s) | 156 |
| Bsu15I | ATCGAT | 1 cut(s) | 99 |
| BsuRI | GGCC | 1 cut(s) | 23 |
| BsuTUI | ATCGAT | 1 cut(s) | 99 |
| BtsCI | GGATG | 1 cut(s) | 84 |
| ClaI | ATCGAT | 1 cut(s) | 99 |
| Csp6I | GTAC | 1 cut(s) | 156 |
| CviAII | CATG | 1 cut(s) | 153 |
| CviJI | RGCY | 1 cut(s) | 23 |
| CviKI_1 | RGCY | 1 cut(s) | 23 |
| CviQI | GTAC | 1 cut(s) | 156 |
| DpnI | GATC | 1 cut(s) | 54 |
| DpnII | GATC | 1 cut(s) | 52 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 124 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 124 |
| Eam1104I | CTCTTC | 1 cut(s) | 108 |
| EarI | CTCTTC | 1 cut(s) | 108 |
| Eco147I | AGGCCT | 1 cut(s) | 23 |
| Eco31I | GGTCTC | 1 cut(s) | 110 |
| EcoRI | GAATTC | 1 cut(s) | 139 |
| FaeI | CATG | 1 cut(s) | 156 |
| FaiI | YATR | 1 cut(s) | 154 |
| FatI | CATG | 1 cut(s) | 152 |
| FokI | GGATG | 1 cut(s) | 71 |
| GsuI | CTGGAG | 1 cut(s) | 74 |
| HaeIII | GGCC | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 156 |
| HinfI | GANTC | 3 cut(s) | 46, 96, 171 |
| HphI | GGTGA | 1 cut(s) | 120 |
| Hpy188III | TCNNGA | 3 cut(s) | 50, 91, 175 |
| Hpy99I | CGWCG | 1 cut(s) | 113 |
| HpyAV | CCTTC | 2 cut(s) | 141, 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 11 |
| Hsp92II | CATG | 1 cut(s) | 156 |
| Kzo9I | GATC | 1 cut(s) | 52 |
| LpnPI | CCDG | 2 cut(s) | 35, 104 |
| LweI | GCATC | 1 cut(s) | 30 |
| MaeIII | GTNAC | 1 cut(s) | 126 |
| MalI | GATC | 1 cut(s) | 54 |
| MboI | GATC | 1 cut(s) | 52 |
| MboII | GAAGA | 1 cut(s) | 125 |
| MhlI | GDGCHC | 1 cut(s) | 65 |
| MluCI | AATT | 1 cut(s) | 139 |
| MlyI | GAGTC | 1 cut(s) | 180 |
| MnlI | CCTC | 1 cut(s) | 98 |
| MslI | CAYNNNNRTG | 3 cut(s) | 38, 68, 151 |
| NdeII | GATC | 1 cut(s) | 52 |
| NlaIII | CATG | 1 cut(s) | 156 |
| NmuCI | GTSAC | 1 cut(s) | 126 |
| NspI | RCATGY | 1 cut(s) | 156 |
| PceI | AGGCCT | 1 cut(s) | 23 |
| PciI | ACATGT | 1 cut(s) | 152 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PfeI | GAWTC | 2 cut(s) | 46, 96 |
| PleI | GAGTC | 1 cut(s) | 179 |
| PpsI | GAGTC | 1 cut(s) | 179 |
| PscI | ACATGT | 1 cut(s) | 152 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 8, 40 |
| RsaI | GTAC | 1 cut(s) | 157 |
| RsaNI | GTAC | 1 cut(s) | 156 |
| RseI | CAYNNNNRTG | 3 cut(s) | 38, 68, 151 |
| Sau3AI | GATC | 1 cut(s) | 52 |
| SchI | GAGTC | 1 cut(s) | 180 |
| SduI | GDGCHC | 1 cut(s) | 65 |
| SetI | ASST | 1 cut(s) | 133 |
| SfaNI | GCATC | 1 cut(s) | 30 |
| SgeI | CNNG | 5 cut(s) | 31, 40, 62, 103, 165 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 38, 68, 151 |
| Sse9I | AATT | 1 cut(s) | 139 |
| SseBI | AGGCCT | 1 cut(s) | 23 |
| StuI | AGGCCT | 1 cut(s) | 23 |
| TaaI | ACNGT | 1 cut(s) | 11 |
| TaqI | TCGA | 3 cut(s) | 99, 111, 149 |
| TasI | AATT | 1 cut(s) | 139 |
| TfiI | GAWTC | 2 cut(s) | 46, 96 |
| TseFI | GTSAC | 1 cut(s) | 126 |
| Tsp45I | GTSAC | 1 cut(s) | 126 |
| XapI | RAATTY | 1 cut(s) | 139 |
| XceI | RCATGY | 1 cut(s) | 156 |