Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10120 AT5G03890 |
| fragaria_vesca | FvH4_6g18810 FvH4_7g32830 FvH4_7g32840 |
| malus_domestica | MD12G1036700.v1.1 MD14G1023400.v1.1 |
| prunus_persica | Prupe.2G317800_v2.0.a1 Prupe.7G109500_v2.0.a1 |
| pyrus_communis | pycom01g23580 pycom07g27050 |
| rosa_chinensis | RchiOBHm_Chr1g0382771 RchiOBHm_Chr3g0473821 |
| rosa_laevigata | RLG00000023981 RLG00000026161 RLG00000026162 |
| rosa_multiflora | Rmu_co8470463.1_g000001 Rmu_sc0007035.1_g000003 Rmu_ssc0000322.1_g000020 |
| rosa_roxburghii | Rroxscaffold_4G00277920 Rroxscaffold_6G00407770 |
| rosa_rugosa | Rorug01G0435700 Rorug03G0135700 |
| rosa_samantha | Rh1AG460900 Rh1AG461000 Rh1BG417700 Rh1CG431300 Rh1DG449900 Rh3BG214700 Rh3CG211400 Rh3DG210600 |
| rosa_wichuraiana | Rw1G041070 Rw3G017030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 308 |
| AccI | GTMKAC | 1 cut(s) | 144 |
| AciI | CCGC | 1 cut(s) | 244 |
| AclWI | GGATC | 1 cut(s) | 302 |
| AcoI | YGGCCR | 2 cut(s) | 115, 158 |
| AcsI | RAATTY | 1 cut(s) | 107 |
| AcuI | CTGAAG | 1 cut(s) | 279 |
| AfaI | GTAC | 2 cut(s) | 71, 201 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 238 |
| AgsI | TTSAA | 2 cut(s) | 380, 415 |
| AjnI | CCWGG | 1 cut(s) | 93 |
| AluBI | AGCT | 2 cut(s) | 269, 376 |
| AluI | AGCT | 2 cut(s) | 269, 376 |
| Alw26I | GTCTC | 2 cut(s) | 40, 125 |
| AlwI | GGATC | 1 cut(s) | 302 |
| AoxI | GGCC | 2 cut(s) | 115, 158 |
| ApoI | RAATTY | 1 cut(s) | 107 |
| BalI | TGGCCA | 1 cut(s) | 117 |
| BccI | CCATC | 2 cut(s) | 47, 416 |
| BceAI | ACGGC | 1 cut(s) | 150 |
| BciT130I | CCWGG | 1 cut(s) | 95 |
| BcoDI | GTCTC | 2 cut(s) | 40, 125 |
| BfaI | CTAG | 3 cut(s) | 65, 452, 475 |
| Bme1390I | CCNGG | 1 cut(s) | 95 |
| BmiI | GGNNCC | 1 cut(s) | 138 |
| BmrFI | CCNGG | 1 cut(s) | 95 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BsaI | GGTCTC | 1 cut(s) | 40 |
| BsaWI | WCCGGW | 1 cut(s) | 139 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 339, 369 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 238 |
| BseBI | CCWGG | 1 cut(s) | 95 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 238 |
| BseMII | CTCAG | 2 cut(s) | 120, 386 |
| BseRI | GAGGAG | 1 cut(s) | 360 |
| BshFI | GGCC | 2 cut(s) | 117, 160 |
| BsiSI | CCGG | 2 cut(s) | 140, 157 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 238 |
| BsmAI | GTCTC | 2 cut(s) | 40, 125 |
| BsmBI | CGTCTC | 1 cut(s) | 125 |
| BsnI | GGCC | 2 cut(s) | 117, 160 |
| Bso31I | GGTCTC | 1 cut(s) | 40 |
| Bsp143I | GATC | 1 cut(s) | 294 |
| BspACI | CCGC | 1 cut(s) | 244 |
| BspANI | GGCC | 2 cut(s) | 117, 160 |
| BspCNI | CTCAG | 2 cut(s) | 121, 385 |
| BspLI | GGNNCC | 1 cut(s) | 138 |
| BspPI | GGATC | 1 cut(s) | 302 |
| BspTNI | GGTCTC | 1 cut(s) | 40 |
| BssMI | GATC | 1 cut(s) | 294 |
| Bst2UI | CCWGG | 1 cut(s) | 95 |
| Bst4CI | ACNGT | 1 cut(s) | 431 |
| Bst6I | CTCTTC | 1 cut(s) | 210 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 322 |
| BstDEI | CTNAG | 2 cut(s) | 129, 372 |
| BstKTI | GATC | 1 cut(s) | 297 |
| BstMAI | GTCTC | 2 cut(s) | 40, 125 |
| BstMBI | GATC | 1 cut(s) | 294 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 157, 322 |
| BstNI | CCWGG | 1 cut(s) | 95 |
| BstSCI | CCNGG | 1 cut(s) | 93 |
| BsuRI | GGCC | 2 cut(s) | 117, 160 |
| CsiI | ACCWGGT | 1 cut(s) | 93 |
| Csp6I | GTAC | 2 cut(s) | 70, 200 |
| CviAII | CATG | 2 cut(s) | 82, 119 |
| CviJI | RGCY | 6 cut(s) | 117, 137, 160, 227, 269, 376 |
| CviKI_1 | RGCY | 6 cut(s) | 117, 137, 160, 227, 269, 376 |
| CviQI | GTAC | 2 cut(s) | 70, 200 |
| DdeI | CTNAG | 2 cut(s) | 129, 372 |
| DpnI | GATC | 1 cut(s) | 296 |
| DpnII | GATC | 1 cut(s) | 294 |
| EaeI | YGGCCR | 2 cut(s) | 115, 158 |
| Eam1104I | CTCTTC | 1 cut(s) | 210 |
| EarI | CTCTTC | 1 cut(s) | 210 |
| Eco31I | GGTCTC | 1 cut(s) | 40 |
| Eco57I | CTGAAG | 1 cut(s) | 279 |
| EcoRII | CCWGG | 1 cut(s) | 93 |
| Esp3I | CGTCTC | 1 cut(s) | 125 |
| FaeI | CATG | 2 cut(s) | 85, 122 |
| FaiI | YATR | 8 cut(s) | 20, 32, 44, 83, 120, 308, 395, 461 |
| FatI | CATG | 2 cut(s) | 81, 118 |
| FblI | GTMKAC | 1 cut(s) | 144 |
| FspBI | CTAG | 3 cut(s) | 65, 452, 475 |
| HaeIII | GGCC | 2 cut(s) | 117, 160 |
| HapII | CCGG | 2 cut(s) | 140, 157 |
| Hin1II | CATG | 2 cut(s) | 85, 122 |
| HinfI | GANTC | 1 cut(s) | 253 |
| HpaII | CCGG | 2 cut(s) | 140, 157 |
| Hpy166II | GTNNAC | 3 cut(s) | 91, 145, 472 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 130 |
| Hpy188III | TCNNGA | 3 cut(s) | 257, 298, 452 |
| Hpy8I | GTNNAC | 3 cut(s) | 91, 145, 472 |
| HpyAV | CCTTC | 2 cut(s) | 232, 428 |
| HpyCH4III | ACNGT | 1 cut(s) | 431 |
| HpyCH4V | TGCA | 3 cut(s) | 22, 122, 325 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 157, 322 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 372 |
| Hsp92II | CATG | 2 cut(s) | 85, 122 |
| Kzo9I | GATC | 1 cut(s) | 294 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LweI | GCATC | 1 cut(s) | 160 |
| MabI | ACCWGGT | 1 cut(s) | 93 |
| MaeI | CTAG | 3 cut(s) | 65, 452, 475 |
| MaeIII | GTNAC | 2 cut(s) | 383, 425 |
| MalI | GATC | 1 cut(s) | 296 |
| MboI | GATC | 1 cut(s) | 294 |
| MboII | GAAGA | 2 cut(s) | 197, 247 |
| MlsI | TGGCCA | 1 cut(s) | 117 |
| MluCI | AATT | 3 cut(s) | 7, 107, 320 |
| MluNI | TGGCCA | 1 cut(s) | 117 |
| MnlI | CCTC | 3 cut(s) | 197, 213, 338 |
| Mox20I | TGGCCA | 1 cut(s) | 117 |
| MscI | TGGCCA | 1 cut(s) | 117 |
| Msp20I | TGGCCA | 1 cut(s) | 117 |
| MspI | CCGG | 2 cut(s) | 140, 157 |
| MspR9I | CCNGG | 1 cut(s) | 95 |
| MvaI | CCWGG | 1 cut(s) | 95 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 157, 322 |
| NdeII | GATC | 1 cut(s) | 294 |
| NlaIII | CATG | 2 cut(s) | 85, 122 |
| NlaIV | GGNNCC | 1 cut(s) | 138 |
| NmuCI | GTSAC | 1 cut(s) | 383 |
| PfeI | GAWTC | 1 cut(s) | 253 |
| PsiI | TTATAA | 1 cut(s) | 308 |
| Psp6I | CCWGG | 1 cut(s) | 93 |
| PspGI | CCWGG | 1 cut(s) | 93 |
| PspN4I | GGNNCC | 1 cut(s) | 138 |
| RsaI | GTAC | 2 cut(s) | 71, 201 |
| RsaNI | GTAC | 2 cut(s) | 70, 200 |
| Sau3AI | GATC | 1 cut(s) | 294 |
| ScrFI | CCNGG | 1 cut(s) | 95 |
| SetI | ASST | 8 cut(s) | 52, 99, 205, 243, 271, 378, 448, 466 |
| SexAI | ACCWGGT | 1 cut(s) | 93 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| Sse9I | AATT | 3 cut(s) | 7, 107, 320 |
| SsiI | CCGC | 1 cut(s) | 244 |
| SspMI | CTAG | 3 cut(s) | 65, 452, 475 |
| StyD4I | CCNGG | 1 cut(s) | 93 |
| TaaI | ACNGT | 1 cut(s) | 431 |
| TaqI | TCGA | 2 cut(s) | 264, 357 |
| TasI | AATT | 3 cut(s) | 7, 107, 320 |
| TatI | WGTACW | 1 cut(s) | 69 |
| TfiI | GAWTC | 1 cut(s) | 253 |
| TseFI | GTSAC | 1 cut(s) | 383 |
| Tsp45I | GTSAC | 1 cut(s) | 383 |
| TspDTI | ATGAA | 1 cut(s) | 98 |
| TspGWI | ACGGA | 1 cut(s) | 198 |
| XapI | RAATTY | 1 cut(s) | 107 |
| XbaI | TCTAGA | 1 cut(s) | 451 |
| XmiI | GTMKAC | 1 cut(s) | 144 |
| XspI | CTAG | 3 cut(s) | 65, 452, 475 |