Prupe.7G153000_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0003684
Physical Location & Seq
Forward (+)
16309238 .. 16312203
2966 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G153000.2

Sequence Viewer

Length: 1239 bp
ATGGCGACTTCTGTGGACAGTAAGGAGCATAGTACTGGGAATTCTGAACAAGGTGATCTATCTGATGACAGTGGACAAGAATATCCACCATCTCCGGTTCATGAGGAGAAGGTTGTGGATGGCTATGATGTGTTTCACGGATCTCCAAATGACAGAAAAAGGATTGCTCTTGTTGTTGACTATTCTGAATTTCCTGGACCCAAAAGGTTCAAGCAGAACATAGAGATCAAAGATGTTGTAACAGAGCATGTTCTTCCTTTCCTTCCTGCCAAATCACTTTTCAGGCTCAGAGCTGTTAGCAAAGAGTGGGATGAGTTGATTACCAGTCCTTTTTTCATTCACCAGCAATCTCATCACTTCCGGGACATCTCTGGTCTGTTTTGTCAACTCCCTGGTGATGCGCCTTTCTTCGTGTCTCTTAATGGTGATGCTTATGGCGTTCCCAGTCCTTCCCTCAGTTTCTTGCCTGAACCAGTTACTGTCAGAACCAGTTGCAATGGTCTGCTCTGCTGCCAAAGCTGCAATGGAGAAAATACCTACTATATTTGCAACCCTGCTACCAAGGATTGGAGAGCGCTTCCCAAGTCAAACTTGTATCATGGCCCTGAACCAGCCCTAGCTCTAGCCTTTGAGCCGTCTGTCCTGAACTTTGCAGCACATTATCAACTTATTTGTGCTTTCTCTTTAACTGATCATCCGGTTATCTGTTTCGAAATATTCTCTTCGAGGTCATCCTCATGGAGACTTGCTGACACGGAATGCTGTGAGCTGGATGCTTCGAAGCTGAATGGCGATGGACTCTTTATGAAGGGTGTAGCCTTCTGGGAAACTTCTGCGGGGGACATTTTGGCTTTTGATTTGAATGAGGAGCAATATGGTATTCTGTCACTCCCTCTCGGCAGCGGACCACATGGTGCTTTGGCAGTGATGCACGGGGAGCTCTGTTACATTCTGCCTCATCGAAGGGGCTATGAGTACAACCTGGACATCTATGGTGATATGGACATGAATCTGAAGCATAGTATTTCTCTTGATGGTGATTTTTTCCACGAATTTACTGAGAAGATGAGGGCTCTGGCTTGCGTCAATAGTGATGTGGTGATAGTTAATATTGGAAGGATACTGATTGCCTATGATGTGAAAGCAGGGAAGGCTGAAGTGCTAAGAAGTGGAACCGGGACTGATGATGGATGTGTGAGGTACCTTCCATATGTGAACAGCCTTGTACACGTGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

413

Amino Acids

45.72

Weight (kDa)

5.1

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1200
AccB1I GGYRCC 1 cut(s) 1200
AccB7I CCANNNNNTGG 1 cut(s) 567
AciI CCGC 2 cut(s) 836, 903
AclWI GGATC 1 cut(s) 148
AcsI RAATTY 3 cut(s) 40, 188, 1052
AcuI CTGAAG 2 cut(s) 1034, 1176
AcvI CACGTG 1 cut(s) 1231
AdeI CACNNNGTG 1 cut(s) 914
AfaI GTAC 4 cut(s) 34, 977, 1202, 1227
AfeI AGCGCT 1 cut(s) 576
AfiI CCNNNNNNNGG 1 cut(s) 567
AflIII ACRYGT 1 cut(s) 1228
AgsI TTSAA 2 cut(s) 211, 862
AjnI CCWGG 3 cut(s) 193, 391, 981
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
AluBI AGCT 6 cut(s) 293, 519, 620, 769, 784, 940
AluI AGCT 6 cut(s) 293, 519, 620, 769, 784, 940
Alw21I GWGCWC 1 cut(s) 942
Alw26I GTCTC 2 cut(s) 420, 736
AlwI GGATC 1 cut(s) 148
AlwNI CAGNNNCTG 1 cut(s) 479
Aor51HI AGCGCT 1 cut(s) 576
AoxI GGCC 1 cut(s) 601
ApeKI GCWGC 4 cut(s) 510, 519, 653, 900
ApoI RAATTY 3 cut(s) 40, 188, 1052
Asp718I GGTACC 1 cut(s) 1200
AspLEI GCGC 2 cut(s) 403, 577
AspS9I GGNCC 3 cut(s) 197, 602, 905
AsuC2I CCSGG 2 cut(s) 362, 1177
AsuHPI GGTGA 7 cut(s) 65, 332, 407, 437, 1007, 1049, 1111
AsuII TTCGAA 2 cut(s) 711, 779
AvaII GGWCC 2 cut(s) 197, 905
BanI GGYRCC 1 cut(s) 1200
BanII GRGCYC 2 cut(s) 942, 1075
BbrPI CACGTG 1 cut(s) 1231
Bbv12I GWGCWC 1 cut(s) 942
BbvI GCAGC 4 cut(s) 497, 506, 665, 912
BccI CCATC 5 cut(s) 97, 113, 788, 1028, 1181
BceAI ACGGC 1 cut(s) 619
BciT130I CCWGG 3 cut(s) 195, 393, 983
BciVI GTATCC 1 cut(s) 1113
BclI TGATCA 1 cut(s) 691
BcnI CCSGG 2 cut(s) 362, 1177
BcoDI GTCTC 2 cut(s) 420, 736
BfaI CTAG 2 cut(s) 617, 623
BfoI RGCGCY 1 cut(s) 578
BfuI GTATCC 1 cut(s) 1113
BisI GCNGC 4 cut(s) 511, 520, 654, 901
BlsI GCNGC 4 cut(s) 512, 521, 655, 902
BmcAI AGTACT 1 cut(s) 34
Bme1390I CCNGG 5 cut(s) 195, 362, 393, 983, 1177
Bme18I GGWCC 2 cut(s) 197, 905
BmgT120I GGNCC 3 cut(s) 197, 602, 905
BmiI GGNNCC 3 cut(s) 199, 1174, 1202
BmrFI CCNGG 5 cut(s) 195, 362, 393, 983, 1177
BmrI ACTGGG 2 cut(s) 45, 438
BmsI GCATC 4 cut(s) 388, 418, 763, 918
BmuI ACTGGG 2 cut(s) 45, 438
Bpu14I TTCGAA 2 cut(s) 711, 779
BpuMI CCSGG 2 cut(s) 362, 1177
BsaAI YACGTR 1 cut(s) 1231
BsaJI CCNNGG 2 cut(s) 391, 561
BsaWI WCCGGW 2 cut(s) 94, 697
Bsc4I CCNNNNNNNGG 1 cut(s) 567
Bse1I ACTGG 5 cut(s) 40, 324, 444, 473, 489
Bse3DI GCAATG 2 cut(s) 502, 529
BseBI CCWGG 3 cut(s) 195, 393, 983
BseDI CCNNGG 2 cut(s) 391, 561
BseGI GGATG 6 cut(s) 124, 316, 694, 731, 778, 1196
BseLI CCNNNNNNNGG 1 cut(s) 567
BseMI GCAATG 2 cut(s) 502, 529
BseMII CTCAG 3 cut(s) 301, 469, 1050
BseNI ACTGG 5 cut(s) 40, 324, 444, 473, 489
BseRI GAGGAG 2 cut(s) 119, 881
BseXI GCAGC 4 cut(s) 497, 506, 665, 912
BshFI GGCC 1 cut(s) 603
BshNI GGYRCC 1 cut(s) 1200
BsiHKAI GWGCWC 1 cut(s) 942
BsiSI CCGG 4 cut(s) 95, 361, 698, 1176
BslFI GGGAC 3 cut(s) 377, 854, 1192
BslI CCNNNNNNNGG 1 cut(s) 567
BsmAI GTCTC 2 cut(s) 420, 736
BsmFI GGGAC 3 cut(s) 377, 854, 1192
BsmI GAATGC 1 cut(s) 764
BsnI GGCC 1 cut(s) 603
Bsp119I TTCGAA 2 cut(s) 711, 779
Bsp1286I GDGCHC 2 cut(s) 942, 1075
Bsp1407I TGTACA 1 cut(s) 1225
Bsp143I GATC 4 cut(s) 55, 140, 225, 691
BspACI CCGC 2 cut(s) 836, 903
BspANI GGCC 1 cut(s) 603
BspCNI CTCAG 3 cut(s) 300, 468, 1051
BspHI TCATGA 1 cut(s) 100
BspLI GGNNCC 3 cut(s) 199, 1174, 1202
BspPI GGATC 1 cut(s) 148
BspT104I TTCGAA 2 cut(s) 711, 779
BspT107I GGYRCC 1 cut(s) 1200
BsrDI GCAATG 2 cut(s) 502, 529
BsrGI TGTACA 1 cut(s) 1225
BsrI ACTGG 5 cut(s) 40, 324, 444, 473, 489
BssECI CCNNGG 2 cut(s) 391, 561
BssMI GATC 4 cut(s) 55, 140, 225, 691
BssT1I CCWWGG 1 cut(s) 561
Bst2UI CCWGG 3 cut(s) 195, 393, 983
Bst4CI ACNGT 3 cut(s) 20, 71, 481
Bst6I CTCTTC 1 cut(s) 727
BstAUI TGTACA 1 cut(s) 1225
BstBAI YACGTR 1 cut(s) 1231
BstBI TTCGAA 2 cut(s) 711, 779
BstC8I GCNNGC 1 cut(s) 1081
BstDEI CTNAG 4 cut(s) 287, 455, 1059, 1163
BstF5I GGATG 6 cut(s) 124, 316, 694, 731, 778, 1196
BstH2I RGCGCY 1 cut(s) 578
BstHHI GCGC 2 cut(s) 403, 577
BstKTI GATC 4 cut(s) 58, 143, 228, 694
BstMAI GTCTC 2 cut(s) 420, 736
BstMBI GATC 4 cut(s) 55, 140, 225, 691
BstMWI GCNNNNNNNGC 4 cut(s) 516, 519, 937, 1151
BstNI CCWGG 3 cut(s) 195, 393, 983
BstNSI RCATGY 1 cut(s) 251
BstSCI CCNGG 5 cut(s) 193, 360, 391, 981, 1175
BstV1I GCAGC 4 cut(s) 497, 506, 665, 912
BstX2I RGATCY 1 cut(s) 140
BstYI RGATCY 1 cut(s) 140
BsuI GTATCC 1 cut(s) 1113
BsuRI GGCC 1 cut(s) 603
BtgZI GCGATG 1 cut(s) 807
BtsCI GGATG 6 cut(s) 124, 316, 694, 731, 778, 1196
BtsI GCAGTG 1 cut(s) 930
BtsIMutI CAGTG 2 cut(s) 76, 930
Cac8I GCNNGC 1 cut(s) 1081
CaiI CAGNNNCTG 1 cut(s) 479
CciI TCATGA 1 cut(s) 100
CfoI GCGC 2 cut(s) 403, 577
Cfr13I GGNCC 3 cut(s) 197, 602, 905
CseI GACGC 1 cut(s) 1072
Csp6I GTAC 4 cut(s) 33, 976, 1201, 1226
CviAII CATG 6 cut(s) 101, 248, 599, 738, 911, 1006
CviQI GTAC 4 cut(s) 33, 976, 1201, 1226
DdeI CTNAG 4 cut(s) 287, 455, 1059, 1163
DpnI GATC 4 cut(s) 57, 142, 227, 693
DpnII GATC 4 cut(s) 55, 140, 225, 691
DraIII CACNNNGTG 1 cut(s) 914
Eam1104I CTCTTC 1 cut(s) 727
EarI CTCTTC 1 cut(s) 727
Ecl136II GAGCTC 1 cut(s) 940
Eco130I CCWWGG 1 cut(s) 561
Eco24I GRGCYC 2 cut(s) 942, 1075
Eco47I GGWCC 2 cut(s) 197, 905
Eco47III AGCGCT 1 cut(s) 576
Eco53kI GAGCTC 1 cut(s) 940
Eco57I CTGAAG 2 cut(s) 1034, 1176
Eco72I CACGTG 1 cut(s) 1231
EcoICRI GAGCTC 1 cut(s) 940
EcoRI GAATTC 1 cut(s) 40
EcoRII CCWGG 3 cut(s) 193, 391, 981
EcoT14I CCWWGG 1 cut(s) 561
EcoT38I GRGCYC 2 cut(s) 942, 1075
ErhI CCWWGG 1 cut(s) 561
FaeI CATG 6 cut(s) 104, 251, 602, 741, 914, 1009
FalI AAGNNNNNCTT 2 cut(s) 575, 607
FaqI GGGAC 3 cut(s) 377, 854, 1192
FatI CATG 6 cut(s) 100, 247, 598, 737, 910, 1005
FauI CCCGC 1 cut(s) 829
FauNDI CATATG 1 cut(s) 1210
FbaI TGATCA 1 cut(s) 691
Fnu4HI GCNGC 4 cut(s) 511, 520, 654, 901
FokI GGATG 6 cut(s) 131, 323, 681, 718, 785, 1203
FriOI GRGCYC 2 cut(s) 942, 1075
Fsp4HI GCNGC 4 cut(s) 511, 520, 654, 901
FspBI CTAG 2 cut(s) 617, 623
GlaI GCGC 2 cut(s) 402, 576
GluI GCNGC 4 cut(s) 511, 520, 654, 901
HaeII RGCGCY 1 cut(s) 578
HaeIII GGCC 1 cut(s) 603
HapII CCGG 4 cut(s) 95, 361, 698, 1176
HgaI GACGC 1 cut(s) 1072
HhaI GCGC 2 cut(s) 403, 577
Hin1II CATG 6 cut(s) 104, 251, 602, 741, 914, 1009
Hin6I GCGC 2 cut(s) 401, 575
HinP1I GCGC 2 cut(s) 401, 575
HincII GTYRAC 2 cut(s) 178, 386
HindII GTYRAC 2 cut(s) 178, 386
HinfI GANTC 2 cut(s) 798, 1009
HpaII CCGG 4 cut(s) 95, 361, 698, 1176
HphI GGTGA 7 cut(s) 65, 332, 407, 437, 1007, 1049, 1111
Hpy166II GTNNAC 6 cut(s) 16, 74, 178, 386, 1216, 1228
Hpy188I TCNGA 6 cut(s) 46, 64, 187, 290, 485, 1014
Hpy188III TCNNGA 3 cut(s) 101, 643, 1031
Hpy8I GTNNAC 6 cut(s) 16, 74, 178, 386, 1216, 1228
HpyAV CCTTC 9 cut(s) 103, 272, 459, 802, 829, 957, 1110, 1144, 1214
HpyCH4III ACNGT 3 cut(s) 20, 71, 481
HpyCH4IV ACGT 1 cut(s) 1230
HpyCH4V TGCA 6 cut(s) 495, 522, 549, 653, 931, 1234
HpyF10VI GCNNNNNNNGC 4 cut(s) 516, 519, 937, 1151
HpyF3I CTNAG 4 cut(s) 287, 455, 1059, 1163
HpySE526I ACGT 1 cut(s) 1230
Hsp92II CATG 6 cut(s) 104, 251, 602, 741, 914, 1009
HspAI GCGC 2 cut(s) 401, 575
KpnI GGTACC 1 cut(s) 1204
Ksp22I TGATCA 1 cut(s) 691
Kzo9I GATC 4 cut(s) 55, 140, 225, 691
LmnI GCTCC 3 cut(s) 25, 868, 937
Lsp1109I GCAGC 4 cut(s) 497, 506, 665, 912
LweI GCATC 4 cut(s) 388, 418, 763, 918
MaeI CTAG 2 cut(s) 617, 623
MaeII ACGT 1 cut(s) 1230
MaeIII GTNAC 4 cut(s) 238, 475, 885, 944
MalI GATC 4 cut(s) 57, 142, 227, 693
MboI GATC 4 cut(s) 55, 140, 225, 691
MboII GAAGA 4 cut(s) 245, 400, 714, 1075
MflI RGATCY 1 cut(s) 140
MhlI GDGCHC 2 cut(s) 942, 1075
MluCI AATT 3 cut(s) 40, 188, 1052
MlyI GAGTC 1 cut(s) 792
MnlI CCTC 9 cut(s) 97, 464, 720, 745, 859, 903, 966, 1062, 1191
MseI TTAA 4 cut(s) 420, 686, 1107, 1237
MslI CAYNNNNRTG 1 cut(s) 736
MspA1I CMGCKG 1 cut(s) 903
MspI CCGG 4 cut(s) 95, 361, 698, 1176
MspR9I CCNGG 5 cut(s) 195, 362, 393, 983, 1177
Mva1269I GAATGC 1 cut(s) 764
MvaI CCWGG 3 cut(s) 195, 393, 983
MwoI GCNNNNNNNGC 4 cut(s) 516, 519, 937, 1151
NciI CCSGG 2 cut(s) 362, 1177
NdeI CATATG 1 cut(s) 1210
NdeII GATC 4 cut(s) 55, 140, 225, 691
NlaIII CATG 6 cut(s) 104, 251, 602, 741, 914, 1009
NlaIV GGNNCC 3 cut(s) 199, 1174, 1202
NmeAIII GCCGAG 1 cut(s) 876
NmuCI GTSAC 1 cut(s) 885
NspI RCATGY 1 cut(s) 251
NspV TTCGAA 2 cut(s) 711, 779
PagI TCATGA 1 cut(s) 100
PctI GAATGC 1 cut(s) 764
PfeI GAWTC 1 cut(s) 1009
PflMI CCANNNNNTGG 1 cut(s) 567
PfoI TCCNGGA 2 cut(s) 193, 360
PkrI GCNGC 4 cut(s) 512, 521, 655, 902
PleI GAGTC 1 cut(s) 792
PmaCI CACGTG 1 cut(s) 1231
PmlI CACGTG 1 cut(s) 1231
PpsI GAGTC 1 cut(s) 792
Ppu21I YACGTR 1 cut(s) 1231
Psp124BI GAGCTC 1 cut(s) 942
Psp6I CCWGG 3 cut(s) 193, 391, 981
PspCI CACGTG 1 cut(s) 1231
PspGI CCWGG 3 cut(s) 193, 391, 981
PspN4I GGNNCC 3 cut(s) 199, 1174, 1202
PspPI GGNCC 3 cut(s) 197, 602, 905
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 1 cut(s) 140
RsaI GTAC 4 cut(s) 34, 977, 1202, 1227
RsaNI GTAC 4 cut(s) 33, 976, 1201, 1226
RseI CAYNNNNRTG 1 cut(s) 736
SacI GAGCTC 1 cut(s) 942
SaqAI TTAA 4 cut(s) 420, 686, 1107, 1237
SatI GCNGC 4 cut(s) 511, 520, 654, 901
Sau3AI GATC 4 cut(s) 55, 140, 225, 691
Sau96I GGNCC 3 cut(s) 197, 602, 905
ScaI AGTACT 1 cut(s) 34
SchI GAGTC 1 cut(s) 792
ScrFI CCNGG 5 cut(s) 195, 362, 393, 983, 1177
SduI GDGCHC 2 cut(s) 942, 1075
SfaNI GCATC 4 cut(s) 388, 418, 763, 918
SfuI TTCGAA 2 cut(s) 711, 779
SinI GGWCC 2 cut(s) 197, 905
SmiMI CAYNNNNRTG 1 cut(s) 736
Sse9I AATT 3 cut(s) 40, 188, 1052
SsiI CCGC 2 cut(s) 836, 903
SspI AATATT 2 cut(s) 717, 1111
SspMI CTAG 2 cut(s) 617, 623
SstI GAGCTC 1 cut(s) 942
StyD4I CCNGG 5 cut(s) 193, 360, 391, 981, 1175
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 3 cut(s) 20, 71, 481
TaiI ACGT 1 cut(s) 1233
TaqI TCGA 4 cut(s) 711, 725, 779, 961
TasI AATT 3 cut(s) 40, 188, 1052
TatI WGTACW 3 cut(s) 32, 975, 1225
TfiI GAWTC 1 cut(s) 1009
Tru1I TTAA 4 cut(s) 420, 686, 1107, 1237
Tru9I TTAA 4 cut(s) 420, 686, 1107, 1237
TscAI CASTG 2 cut(s) 76, 930
TseFI GTSAC 1 cut(s) 885
TseI GCWGC 4 cut(s) 510, 519, 653, 900
Tsp45I GTSAC 1 cut(s) 885
TspDTI ATGAA 4 cut(s) 89, 325, 821, 1022
TspGWI ACGGA 2 cut(s) 153, 770
TspRI CASTG 2 cut(s) 76, 930
Van91I CCANNNNNTGG 1 cut(s) 567
VpaK11BI GGWCC 2 cut(s) 197, 905
XapI RAATTY 3 cut(s) 40, 188, 1052
XceI RCATGY 1 cut(s) 251
XcmI CCANNNNNNNNNTGG 1 cut(s) 521
XspI CTAG 2 cut(s) 617, 623
ZrmI AGTACT 1 cut(s) 34
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.