Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002938

Physical Location & Seq

Genomic Coordinates Reverse (-)

16591014 .. 16593361

Gene Structure 2348 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G158200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 900 bp

ATGTCATCAGCAGCAGCAGCCACCAATTTCCACCAGCCGAACCTCGAACTCTTTACCTGCCGATCTTGCACGCTCAAATCTCTGAAACCCATTTCTTCTTTACGATTTCCCACTTCAAAATTTGTTCTCTCTGGCGGGTTATTATTAGTCCCCAAGAAAGGTGTTTCTGGGAGGAGGAGAAGGAGCAGAGCCATGGGCCCCAACTCCATGGTTGAGCTAATAAAGATGCTACCTTTTAGGAACCCTGATGATGATGATGATGATGATGAAGAAGGCGTTGGAGTGCTTCAACGTGATGATTATGTTGATGGGCCTTCAGAATTGAGTCCTTTGATTGTGGATAAAGGGTGGGAATCTACACTCAATCGACTGAGCAAGTGGATTATATCTGCCCTTTTTGCTGTTGTGATTCTATGGAGGCATGATGCTGAAGCCATGTGGGCTGCTATGGGGTCTGTTGCAAATACCATTATATCTGTGGCACTCAAAAAGATACTAAACCAGGAGAGACCTGTTCCCTCATTGAGATCTGAGCCTGGAATGCCTTCTTCCCATGCACAATCTATCTTCTACGTTGTTTTGTTCACAATTTGGTCAGTTGTGGAATGGCTAGGGATAAATGAGATTACCTTGACCATCGGTGCTTTTGCCTTAGCAACTGGGATATATCTTTCGTGGTTACGAGTCTCGCAAAAACTTCATACACTCGGCCAAGTGGTTGTGGGTGCTACATTTGGAACCATTTTCTCCATTCTGTGGTTGTTGTTATGGAATGCTTTTGTGTATAGAGCATTTATTTCCTCTTTATGGGTTCGAATAGCTATAGCATTGGGGGCTGCTGGGTTTTGCCTAGGATTTGTTGTATACGTAATTCGTCATTGGCTCAGGGATGAACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006629 GO:0006638 GO:0006639 GO:0006651 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008195 GO:0008610 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016462 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019538 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046339 GO:0046460 GO:0046463 GO:0046486 GO:0047874 GO:0070085 GO:0071704 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 map00510

Pfam Domains

Protein Families

PAP2

Protein Analysis

300

Amino Acids

33.31

Weight (kDa)

9.19

Isoelectric Point (pI)

49.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002938)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50920 AT3G50920 AT5G66450 AT5G66450 AT5G66450 AT5G66450 AT5G66450
fragaria_vesca	FvH4_1g12790
malus_domestica	MD02G1143500.v1.1 MD15G1256700.v1.1
prunus_persica	Prupe.7G158200_v2.0.a1
pyrus_communis	pycom02g11340 pycom15g22470
rosa_chinensis	RchiOBHm_Chr2g0100911 RchiOBHm_Chr2g0100921 RchiOBHm_Chr2g0100931
rosa_laevigata	RLG00000016993 RLG00000017024 RLG00000017026
rosa_multiflora	Rmu_sc0001659.1_g000048 Rmu_sc0001862.1_g000016
rosa_roxburghii	Rroxscaffold_2G00141740 Rroxscaffold_6G00391440
rosa_rugosa	Rorug02G0093700 Rorug02G0093800 Rorug02G0093800
rosa_samantha	Rh2AG139800 Rh2AG141300 Rh2AG141400 Rh2BG143100 Rh2BG146500 Rh2BG146600 Rh2CG147700 Rh2CG147800 Rh2DG147000 Rh2DG147100
rosa_wichuraiana	Rw2G011080 Rw2G011090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	65
AccB7I	CCANNNNNTGG	1 cut(s)	756
AccI	GTMKAC	1 cut(s)	864
AciI	CCGC	1 cut(s)	135
AcoI	YGGCCR	1 cut(s)	709
AcsI	RAATTY	1 cut(s)	119
AcuI	CTGAAG	2 cut(s)	300, 450
AfiI	CCNNNNNNNGG	3 cut(s)	158, 756, 807
AgsI	TTSAA	2 cut(s)	117, 290
AjnI	CCWGG	2 cut(s)	501, 535
AjuI	GAANNNNNNNTTGG	2 cut(s)	261, 293
AluBI	AGCT	2 cut(s)	217, 821
AluI	AGCT	2 cut(s)	217, 821
Alw26I	GTCTC	2 cut(s)	502, 691
AoxI	GGCC	3 cut(s)	196, 311, 709
ApaI	GGGCCC	1 cut(s)	200
ApeKI	GCWGC	5 cut(s)	11, 14, 17, 443, 836
ApoI	RAATTY	1 cut(s)	119
Asp700I	GAANNNNTTC	1 cut(s)	544
AspA2I	CCTAGG	1 cut(s)	850
AspS9I	GGNCC	3 cut(s)	196, 197, 311
AsuII	TTCGAA	1 cut(s)	814
AvrII	CCTAGG	1 cut(s)	850
BaeGI	GKGCMC	1 cut(s)	200
BanII	GRGCYC	1 cut(s)	200
BbvI	GCAGC	5 cut(s)	23, 26, 29, 430, 823
BccI	CCATC	2 cut(s)	302, 644
BciT130I	CCWGG	2 cut(s)	503, 537
BcoDI	GTCTC	2 cut(s)	502, 691
BfaI	CTAG	2 cut(s)	611, 851
BfmI	CTRYAG	1 cut(s)	822
BfuAI	ACCTGC	1 cut(s)	65
BglI	GCCNNNNNGGC	1 cut(s)	440
BglII	AGATCT	1 cut(s)	527
BisI	GCNGC	5 cut(s)	12, 15, 18, 444, 837
BlnI	CCTAGG	1 cut(s)	850
BlsI	GCNGC	5 cut(s)	13, 16, 19, 445, 838
Bme1390I	CCNGG	2 cut(s)	503, 537
BmgT120I	GGNCC	3 cut(s)	196, 197, 311
BmiI	GGNNCC	4 cut(s)	198, 199, 242, 739
BmrFI	CCNGG	2 cut(s)	503, 537
BmrI	ACTGGG	1 cut(s)	669
BmsI	GCATC	2 cut(s)	216, 415
BmuI	ACTGGG	1 cut(s)	669
Bpu10I	CCTNAGC	2 cut(s)	652, 884
Bpu14I	TTCGAA	1 cut(s)	814
BsaAI	YACGTR	1 cut(s)	868
BsaI	GGTCTC	1 cut(s)	502
BsaJI	CCNNGG	3 cut(s)	192, 207, 850
Bsc4I	CCNNNNNNNGG	3 cut(s)	158, 756, 807
Bse1I	ACTGG	1 cut(s)	664
BseBI	CCWGG	2 cut(s)	503, 537
BseDI	CCNNGG	3 cut(s)	192, 207, 850
BseGI	GGATG	1 cut(s)	895
BseLI	CCNNNNNNNGG	3 cut(s)	158, 756, 807
BseMII	CTCAG	3 cut(s)	362, 522, 898
BseNI	ACTGG	1 cut(s)	664
BseRI	GAGGAG	2 cut(s)	187, 190
BseSI	GKGCMC	1 cut(s)	200
BseXI	GCAGC	5 cut(s)	23, 26, 29, 430, 823
BseYI	CCCAGC	1 cut(s)	839
BshFI	GGCC	3 cut(s)	198, 313, 711
BslFI	GGGAC	1 cut(s)	134
BslI	CCNNNNNNNGG	3 cut(s)	158, 756, 807
BsmAI	GTCTC	2 cut(s)	502, 691
BsmFI	GGGAC	1 cut(s)	134
BsmI	GAATGC	2 cut(s)	546, 778
BsnI	GGCC	3 cut(s)	198, 313, 711
Bso31I	GGTCTC	1 cut(s)	502
Bsp119I	TTCGAA	1 cut(s)	814
Bsp120I	GGGCCC	1 cut(s)	196
Bsp1286I	GDGCHC	1 cut(s)	200
Bsp143I	GATC	2 cut(s)	62, 527
Bsp19I	CCATGG	2 cut(s)	192, 207
BspACI	CCGC	1 cut(s)	135
BspANI	GGCC	3 cut(s)	198, 313, 711
BspCNI	CTCAG	3 cut(s)	363, 523, 897
BspLI	GGNNCC	4 cut(s)	198, 199, 242, 739
BspMI	ACCTGC	1 cut(s)	65
BspT104I	TTCGAA	1 cut(s)	814
BspTNI	GGTCTC	1 cut(s)	502
BsrI	ACTGG	1 cut(s)	664
BssECI	CCNNGG	3 cut(s)	192, 207, 850
BssMI	GATC	2 cut(s)	62, 527
BssNAI	GTATAC	1 cut(s)	865
BssT1I	CCWWGG	3 cut(s)	192, 207, 850
Bst1107I	GTATAC	1 cut(s)	865
Bst2UI	CCWGG	2 cut(s)	503, 537
Bst4CI	ACNGT	1 cut(s)	897
BstBAI	YACGTR	1 cut(s)	868
BstBI	TTCGAA	1 cut(s)	814
BstC8I	GCNNGC	1 cut(s)	71
BstDEI	CTNAG	4 cut(s)	371, 531, 652, 884
BstDSI	CCRYGG	2 cut(s)	192, 207
BstF5I	GGATG	1 cut(s)	895
BstKTI	GATC	2 cut(s)	65, 530
BstMAI	GTCTC	2 cut(s)	502, 691
BstMBI	GATC	2 cut(s)	62, 527
BstMWI	GCNNNNNNNGC	6 cut(s)	17, 66, 398, 440, 541, 833
BstNI	CCWGG	2 cut(s)	503, 537
BstSCI	CCNGG	2 cut(s)	501, 535
BstSFI	CTRYAG	1 cut(s)	822
BstSLI	GKGCMC	1 cut(s)	200
BstSNI	TACGTA	1 cut(s)	868
BstV1I	GCAGC	5 cut(s)	23, 26, 29, 430, 823
BstX2I	RGATCY	1 cut(s)	527
BstXI	CCANNNNNNTGG	1 cut(s)	208
BstYI	RGATCY	1 cut(s)	527
BstZ17I	GTATAC	1 cut(s)	865
BsuRI	GGCC	3 cut(s)	198, 313, 711
BtgI	CCRYGG	2 cut(s)	192, 207
BtsCI	GGATG	1 cut(s)	895
BveI	ACCTGC	1 cut(s)	65
Cac8I	GCNNGC	1 cut(s)	71
Cfr13I	GGNCC	3 cut(s)	196, 197, 311
CviAII	CATG	5 cut(s)	193, 208, 422, 436, 554
DdeI	CTNAG	4 cut(s)	371, 531, 652, 884
DpnI	GATC	2 cut(s)	64, 529
DpnII	GATC	2 cut(s)	62, 527
EaeI	YGGCCR	1 cut(s)	709
Eco105I	TACGTA	1 cut(s)	868
Eco130I	CCWWGG	3 cut(s)	192, 207, 850
Eco24I	GRGCYC	1 cut(s)	200
Eco31I	GGTCTC	1 cut(s)	502
Eco57I	CTGAAG	2 cut(s)	300, 450
EcoO109I	RGGNCCY	1 cut(s)	197
EcoRII	CCWGG	2 cut(s)	501, 535
EcoT14I	CCWWGG	3 cut(s)	192, 207, 850
EcoT38I	GRGCYC	1 cut(s)	200
ErhI	CCWWGG	3 cut(s)	192, 207, 850
FaeI	CATG	5 cut(s)	196, 211, 425, 439, 557
FaqI	GGGAC	1 cut(s)	134
FatI	CATG	5 cut(s)	192, 207, 421, 435, 553
FauI	CCCGC	1 cut(s)	128
FblI	GTMKAC	1 cut(s)	864
Fnu4HI	GCNGC	5 cut(s)	12, 15, 18, 444, 837
FriOI	GRGCYC	1 cut(s)	200
Fsp4HI	GCNGC	5 cut(s)	12, 15, 18, 444, 837
FspBI	CTAG	2 cut(s)	611, 851
GluI	GCNGC	5 cut(s)	12, 15, 18, 444, 837
GsaI	CCCAGC	1 cut(s)	843
HaeIII	GGCC	3 cut(s)	198, 313, 711
Hin1II	CATG	5 cut(s)	196, 211, 425, 439, 557
HinfI	GANTC	4 cut(s)	325, 353, 409, 684
Hpy166II	GTNNAC	2 cut(s)	585, 865
Hpy188I	TCNGA	3 cut(s)	84, 319, 532
Hpy8I	GTNNAC	2 cut(s)	585, 865
HpyAV	CCTTC	4 cut(s)	174, 266, 324, 555
HpyCH4III	ACNGT	1 cut(s)	897
HpyCH4IV	ACGT	3 cut(s)	292, 573, 867
HpyCH4V	TGCA	3 cut(s)	69, 461, 557
HpyF10VI	GCNNNNNNNGC	6 cut(s)	17, 66, 398, 440, 541, 833
HpyF3I	CTNAG	4 cut(s)	371, 531, 652, 884
HpySE526I	ACGT	3 cut(s)	292, 573, 867
Hsp92II	CATG	5 cut(s)	196, 211, 425, 439, 557
Kzo9I	GATC	2 cut(s)	62, 527
LmnI	GCTCC	1 cut(s)	183
Lsp1109I	GCAGC	5 cut(s)	23, 26, 29, 430, 823
LweI	GCATC	2 cut(s)	216, 415
MaeI	CTAG	2 cut(s)	611, 851
MaeII	ACGT	3 cut(s)	292, 573, 867
MaeIII	GTNAC	1 cut(s)	678
MalI	GATC	2 cut(s)	64, 529
MboI	GATC	2 cut(s)	62, 527
MboII	GAAGA	4 cut(s)	87, 281, 540, 559
MflI	RGATCY	1 cut(s)	527
MhlI	GDGCHC	1 cut(s)	200
MluCI	AATT	5 cut(s)	25, 119, 320, 588, 870
MlyI	GAGTC	2 cut(s)	334, 693
MmeI	TCCRAC	1 cut(s)	259
MnlI	CCTC	6 cut(s)	53, 165, 168, 411, 529, 811
MroXI	GAANNNNTTC	1 cut(s)	544
MspR9I	CCNGG	2 cut(s)	503, 537
Mva1269I	GAATGC	2 cut(s)	546, 778
MvaI	CCWGG	2 cut(s)	503, 537
MwoI	GCNNNNNNNGC	6 cut(s)	17, 66, 398, 440, 541, 833
NcoI	CCATGG	2 cut(s)	192, 207
NdeII	GATC	2 cut(s)	62, 527
NlaIII	CATG	5 cut(s)	196, 211, 425, 439, 557
NlaIV	GGNNCC	4 cut(s)	198, 199, 242, 739
NmeAIII	GCCGAG	1 cut(s)	687
NspV	TTCGAA	1 cut(s)	814
PctI	GAATGC	2 cut(s)	546, 778
PdmI	GAANNNNTTC	1 cut(s)	544
PfeI	GAWTC	2 cut(s)	353, 409
PflMI	CCANNNNNTGG	1 cut(s)	756
PkrI	GCNGC	5 cut(s)	13, 16, 19, 445, 838
PleI	GAGTC	2 cut(s)	333, 692
PpsI	GAGTC	2 cut(s)	333, 692
Ppu21I	YACGTR	1 cut(s)	868
Psp6I	CCWGG	2 cut(s)	501, 535
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	2 cut(s)	501, 535
PspN4I	GGNNCC	4 cut(s)	198, 199, 242, 739
PspOMI	GGGCCC	1 cut(s)	196
PspPI	GGNCC	3 cut(s)	196, 197, 311
PsuI	RGATCY	1 cut(s)	527
SatI	GCNGC	5 cut(s)	12, 15, 18, 444, 837
Sau3AI	GATC	2 cut(s)	62, 527
Sau96I	GGNCC	3 cut(s)	196, 197, 311
SchI	GAGTC	2 cut(s)	334, 693
ScrFI	CCNGG	2 cut(s)	503, 537
SduI	GDGCHC	1 cut(s)	200
SfaNI	GCATC	2 cut(s)	216, 415
SfcI	CTRYAG	1 cut(s)	822
SfuI	TTCGAA	1 cut(s)	814
SnaBI	TACGTA	1 cut(s)	868
Sse9I	AATT	5 cut(s)	25, 119, 320, 588, 870
SsiI	CCGC	1 cut(s)	135
SspMI	CTAG	2 cut(s)	611, 851
StyD4I	CCNGG	2 cut(s)	501, 535
StyI	CCWWGG	3 cut(s)	192, 207, 850
TaaI	ACNGT	1 cut(s)	897
TaiI	ACGT	3 cut(s)	295, 576, 870
TaqI	TCGA	3 cut(s)	45, 367, 814
TasI	AATT	5 cut(s)	25, 119, 320, 588, 870
TfiI	GAWTC	2 cut(s)	353, 409
TseI	GCWGC	5 cut(s)	11, 14, 17, 443, 836
TspDTI	ATGAA	2 cut(s)	282, 689
Van91I	CCANNNNNTGG	1 cut(s)	756
XapI	RAATTY	1 cut(s)	119
XcmI	CCANNNNNNNNNTGG	1 cut(s)	475
XmaJI	CCTAGG	1 cut(s)	850
XmiI	GTMKAC	1 cut(s)	864
XmnI	GAANNNNTTC	1 cut(s)	544
XspI	CTAG	2 cut(s)	611, 851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.