RchiOBHm_Chr2g0100931

Lipid phosphate phosphatase epsilon

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
12731655 .. 12732291
637 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47555

Sequence Viewer

Length: 249 bp
ATGAGTGATCAAGTTATTTACTACATATTAGGTCTGAACCAAAGAGAATTGAAAGAGATATATCGCCTATGCATTTCTTATTATCTGTCTTTGCAGTCATGGATACCAGTCTCACATCGACTTCATACTCTGAGCCAAGTGATTGTGGGTGGTACCCTTGGGACCATTTTCTCCATTCTATGGTACTGGTCATGGAATGTCGCTGTGCACGAACCATATGTATTTCGACTTCTGGGTTCAAATAGTTAG

Protein Analysis

82

Amino Acids

9.64

Weight (kDa)

7.92

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 1 cut(s) 152
AccB7I CCANNNNNTGG 1 cut(s) 180
AfaI GTAC 2 cut(s) 154, 185
AfiI CCNNNNNNNGG 1 cut(s) 180
AgsI TTSAA 2 cut(s) 52, 240
Alw21I GWGCWC 1 cut(s) 210
Alw26I GTCTC 1 cut(s) 115
Alw44I GTGCAC 1 cut(s) 206
ApaLI GTGCAC 1 cut(s) 206
Asp718I GGTACC 1 cut(s) 152
AspS9I GGNCC 1 cut(s) 162
AvaII GGWCC 1 cut(s) 162
BaeGI GKGCMC 1 cut(s) 210
BanI GGYRCC 1 cut(s) 152
BarI GAAGNNNNNNTAC 2 cut(s) 213, 245
Bbv12I GWGCWC 1 cut(s) 210
BciVI GTATCC 1 cut(s) 96
BclI TGATCA 1 cut(s) 7
BcoDI GTCTC 1 cut(s) 115
BfuI GTATCC 1 cut(s) 96
Bme18I GGWCC 1 cut(s) 162
BmgT120I GGNCC 1 cut(s) 162
BmiI GGNNCC 2 cut(s) 154, 163
BsaJI CCNNGG 1 cut(s) 157
Bsc4I CCNNNNNNNGG 1 cut(s) 180
Bse1I ACTGG 2 cut(s) 107, 191
BseDI CCNNGG 1 cut(s) 157
BseLI CCNNNNNNNGG 1 cut(s) 180
BseMII CTCAG 1 cut(s) 122
BseNI ACTGG 2 cut(s) 107, 191
BseSI GKGCMC 1 cut(s) 210
BshNI GGYRCC 1 cut(s) 152
BsiHKAI GWGCWC 1 cut(s) 210
BslFI GGGAC 1 cut(s) 175
BslI CCNNNNNNNGG 1 cut(s) 180
BsmAI GTCTC 1 cut(s) 115
BsmFI GGGAC 1 cut(s) 175
Bsp1286I GDGCHC 1 cut(s) 210
Bsp143I GATC 1 cut(s) 7
BspCNI CTCAG 1 cut(s) 123
BspLI GGNNCC 2 cut(s) 154, 163
BspT107I GGYRCC 1 cut(s) 152
BsrI ACTGG 2 cut(s) 107, 191
BssECI CCNNGG 1 cut(s) 157
BssMI GATC 1 cut(s) 7
BssT1I CCWWGG 1 cut(s) 157
BstDEI CTNAG 1 cut(s) 131
BstKTI GATC 1 cut(s) 10
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 1 cut(s) 7
BstSLI GKGCMC 1 cut(s) 210
BsuI GTATCC 1 cut(s) 96
Cfr13I GGNCC 1 cut(s) 162
Csp6I GTAC 2 cut(s) 153, 184
CviAII CATG 2 cut(s) 99, 192
CviJI RGCY 1 cut(s) 135
CviKI_1 RGCY 1 cut(s) 135
CviQI GTAC 2 cut(s) 153, 184
DdeI CTNAG 1 cut(s) 131
DpnI GATC 1 cut(s) 9
DpnII GATC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 162
EcoT14I CCWWGG 1 cut(s) 157
EcoT22I ATGCAT 1 cut(s) 74
ErhI CCWWGG 1 cut(s) 157
FaeI CATG 2 cut(s) 102, 195
FaiI YATR 9 cut(s) 26, 61, 70, 100, 126, 181, 193, 217, 219
FaqI GGGAC 1 cut(s) 175
FatI CATG 2 cut(s) 98, 191
FauNDI CATATG 1 cut(s) 217
FbaI TGATCA 1 cut(s) 7
Hin1II CATG 2 cut(s) 102, 195
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 2 cut(s) 36, 132
Hpy8I GTNNAC 1 cut(s) 208
HpyCH4V TGCA 3 cut(s) 72, 94, 208
HpyF3I CTNAG 1 cut(s) 131
Hsp92II CATG 2 cut(s) 102, 195
KpnI GGTACC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 1 cut(s) 7
LpnPI CCDG 3 cut(s) 120, 172, 218
MalI GATC 1 cut(s) 9
MboI GATC 1 cut(s) 7
MhlI GDGCHC 1 cut(s) 210
MluCI AATT 1 cut(s) 47
Mph1103I ATGCAT 1 cut(s) 74
NdeI CATATG 1 cut(s) 217
NdeII GATC 1 cut(s) 7
NlaIII CATG 2 cut(s) 102, 195
NlaIV GGNNCC 2 cut(s) 154, 163
NsiI ATGCAT 1 cut(s) 74
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PflMI CCANNNNNTGG 1 cut(s) 180
PspN4I GGNNCC 2 cut(s) 154, 163
PspPI GGNCC 1 cut(s) 162
RsaI GTAC 2 cut(s) 154, 185
RsaNI GTAC 2 cut(s) 153, 184
Sau3AI GATC 1 cut(s) 7
Sau96I GGNCC 1 cut(s) 162
SduI GDGCHC 1 cut(s) 210
SetI ASST 1 cut(s) 34
SgeI CNNG 9 cut(s) 23, 111, 119, 149, 170, 199, 204, 221, 245
SinI GGWCC 1 cut(s) 162
Sse9I AATT 1 cut(s) 47
StyI CCWWGG 1 cut(s) 157
TaqI TCGA 2 cut(s) 118, 226
TasI AATT 1 cut(s) 47
TspDTI ATGAA 1 cut(s) 113
Van91I CCANNNNNTGG 1 cut(s) 180
VneI GTGCAC 1 cut(s) 206
VpaK11BI GGWCC 1 cut(s) 162
Zsp2I ATGCAT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.