Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002670

Physical Location & Seq

Genomic Coordinates Reverse (-)

17966042 .. 17968923

Gene Structure 2882 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G185300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 474 bp

ATGAGTGCTCTACCGAGCTCGTTCGTTTCAGTTCAAAATCCCAAAACCCACTTCTTAGCTGGTTCTTCTTCGAAGCCAATGTACCAGTGTCTTTTGAATGTTAGCCCCAGTAATCTAAATTCCACTTCATATAGAAGGCCTCTTGTTGTCCGAGCAGGTGGGGACAGACCAAGTTCTGCGAGTATCTTTGTTGGTGGGTTTGTATTGGGGGGGATTGTTGTTGGAGCATTAGGTTGTGTATATGCGCCTCAGATAAGCAAGGCACTAGCTGGAGCCGACAGAAAAGATTTGATGAGGAAGCTACCAAAGTTTATTTATGATGAAGAGAAAGCTCTTGAGAAAACCCGTAAAATACTGGCTGAGAAGATTGCACAGCTAAACTCCGCCATAGACGATGTTTCGGCTCAGCTGCATGCAGATGATACCCCAAATGGAGCTGCAGTGGCTTCAGATGAAGTTGAAGCTTCCATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

158

Amino Acids

16.59

Weight (kDa)

8.56

Isoelectric Point (pI)

32.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002670)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42960
fragaria_vesca	FvH4_1g10160 FvH4_1g10160 FvH4_1g10160 FvH4_5g25770
malus_domestica	MD00G1135400.v1.1 MD02G1113600.v1.1 MD06G1006300.v1.1 MD15G1228800.v1.1
prunus_persica	Prupe.5G007900_v2.0.a1 Prupe.7G185300_v2.0.a1 Prupe.7G185300_v2.0.a1 Prupe.7G185300_v2.0.a1 Prupe.7G185300_v2.0.a1 Prupe.7G185300_v2.0.a1
pyrus_communis	pycom02g08860 pycom06g00560 pycom15g20390 pycom16g26100
rosa_chinensis	RchiOBHm_Chr2g0096941 RchiOBHm_Chr7g0216241
rosa_laevigata	RLG00000002588 RLG00000016685
rosa_multiflora	Rmu_sc0001651.1_g000004 Rmu_sc0003545.1_g000008
rosa_roxburghii	Rroxscaffold_2G00145140 Rroxscaffold_3G00243560
rosa_rugosa	Rorug02G0062000 Rorug02G0062100 Rorug07G0159300
rosa_samantha	Rh2AG110100 Rh2BG111900 Rh2CG114000 Rh2DG113100 Rh7AG296500 Rh7BG288700 Rh7CG316900 Rh7DG299200
rosa_wichuraiana	Rw2G008500 Rw7G025230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	146
Acc36I	ACCTGC	1 cut(s)	146
AciI	CCGC	1 cut(s)	384
AcsI	RAATTY	1 cut(s)	118
AcuI	CTGAAG	1 cut(s)	432
AfaI	GTAC	1 cut(s)	83
AgsI	TTSAA	3 cut(s)	35, 97, 461
AjuI	GAANNNNNNNTTGG	2 cut(s)	35, 67
AluBI	AGCT	9 cut(s)	18, 59, 269, 301, 332, 376, 409, 437, 464
AluI	AGCT	9 cut(s)	18, 59, 269, 301, 332, 376, 409, 437, 464
Alw21I	GWGCWC	2 cut(s)	10, 20
AoxI	GGCC	1 cut(s)	137
ApeKI	GCWGC	2 cut(s)	409, 437
ApoI	RAATTY	1 cut(s)	118
AspLEI	GCGC	1 cut(s)	247
AsuII	TTCGAA	1 cut(s)	71
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	65, 97
Bbv12I	GWGCWC	2 cut(s)	10, 20
BbvI	GCAGC	2 cut(s)	396, 424
BfaI	CTAG	1 cut(s)	266
BfmI	CTRYAG	1 cut(s)	438
BfuAI	ACCTGC	1 cut(s)	146
BisI	GCNGC	2 cut(s)	410, 438
BlpI	GCTNAGC	1 cut(s)	405
BlsI	GCNGC	2 cut(s)	411, 439
BmiI	GGNNCC	1 cut(s)	274
BmrI	ACTGGG	1 cut(s)	102
BmuI	ACTGGG	1 cut(s)	102
BpmI	CTGGAG	1 cut(s)	291
Bpu1102I	GCTNAGC	1 cut(s)	405
Bpu14I	TTCGAA	1 cut(s)	71
BpuEI	CTTGAG	1 cut(s)	356
BsaXI	ACNNNNNCTCC	2 cut(s)	426, 456
Bse1I	ACTGG	3 cut(s)	85, 108, 360
BseMII	CTCAG	3 cut(s)	263, 351, 419
BseNI	ACTGG	3 cut(s)	85, 108, 360
BseXI	GCAGC	2 cut(s)	396, 424
BshFI	GGCC	1 cut(s)	139
BsiHKAI	GWGCWC	2 cut(s)	10, 20
BslFI	GGGAC	1 cut(s)	176
BsmFI	GGGAC	1 cut(s)	176
BsnI	GGCC	1 cut(s)	139
Bsp119I	TTCGAA	1 cut(s)	71
Bsp1286I	GDGCHC	2 cut(s)	10, 20
Bsp1720I	GCTNAGC	1 cut(s)	405
BspACI	CCGC	1 cut(s)	384
BspANI	GGCC	1 cut(s)	139
BspCNI	CTCAG	3 cut(s)	262, 352, 418
BspLI	GGNNCC	1 cut(s)	274
BspMAI	CTGCAG	1 cut(s)	442
BspMI	ACCTGC	1 cut(s)	146
BspT104I	TTCGAA	1 cut(s)	71
BsrI	ACTGG	3 cut(s)	85, 108, 360
Bst6I	CTCTTC	1 cut(s)	318
BstBI	TTCGAA	1 cut(s)	71
BstC8I	GCNNGC	1 cut(s)	414
BstDEI	CTNAG	4 cut(s)	55, 249, 360, 405
BstHHI	GCGC	1 cut(s)	247
BstMWI	GCNNNNNNNGC	1 cut(s)	443
BstNSI	RCATGY	1 cut(s)	416
BstSFI	CTRYAG	1 cut(s)	438
BstV1I	GCAGC	2 cut(s)	396, 424
BsuRI	GGCC	1 cut(s)	139
BtsI	GCAGTG	1 cut(s)	447
BtsIMutI	CAGTG	2 cut(s)	92, 447
BveI	ACCTGC	1 cut(s)	146
Cac8I	GCNNGC	1 cut(s)	414
CfoI	GCGC	1 cut(s)	247
Csp6I	GTAC	1 cut(s)	82
CviAII	CATG	1 cut(s)	413
CviQI	GTAC	1 cut(s)	82
DdeI	CTNAG	4 cut(s)	55, 249, 360, 405
Eam1104I	CTCTTC	1 cut(s)	318
EarI	CTCTTC	1 cut(s)	318
EciI	GGCGGA	1 cut(s)	373
Ecl136II	GAGCTC	1 cut(s)	18
Eco147I	AGGCCT	1 cut(s)	139
Eco24I	GRGCYC	1 cut(s)	20
Eco53kI	GAGCTC	1 cut(s)	18
Eco57I	CTGAAG	1 cut(s)	432
EcoICRI	GAGCTC	1 cut(s)	18
EcoT38I	GRGCYC	1 cut(s)	20
FaeI	CATG	1 cut(s)	416
FaiI	YATR	9 cut(s)	130, 132, 241, 243, 318, 389, 414, 470, 472
FaqI	GGGAC	1 cut(s)	176
FatI	CATG	1 cut(s)	412
Fnu4HI	GCNGC	2 cut(s)	410, 438
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	2 cut(s)	410, 438
FspBI	CTAG	1 cut(s)	266
GlaI	GCGC	1 cut(s)	246
GluI	GCNGC	2 cut(s)	410, 438
GsuI	CTGGAG	1 cut(s)	291
HaeIII	GGCC	1 cut(s)	139
HhaI	GCGC	1 cut(s)	247
Hin1II	CATG	1 cut(s)	416
Hin6I	GCGC	1 cut(s)	245
HinP1I	GCGC	1 cut(s)	245
HindIII	AAGCTT	1 cut(s)	462
Hpy188I	TCNGA	3 cut(s)	152, 252, 451
Hpy188III	TCNNGA	1 cut(s)	335
HpyAV	CCTTC	1 cut(s)	129
HpyCH4V	TGCA	4 cut(s)	371, 412, 416, 440
HpyF10VI	GCNNNNNNNGC	1 cut(s)	443
HpyF3I	CTNAG	4 cut(s)	55, 249, 360, 405
Hsp92II	CATG	1 cut(s)	416
HspAI	GCGC	1 cut(s)	245
LmnI	GCTCC	3 cut(s)	224, 272, 434
LpnPI	CCDG	6 cut(s)	45, 98, 121, 141, 255, 341
Lsp1109I	GCAGC	2 cut(s)	396, 424
MaeI	CTAG	1 cut(s)	266
MboII	GAAGA	4 cut(s)	57, 60, 335, 376
MhlI	GDGCHC	2 cut(s)	10, 20
MluCI	AATT	1 cut(s)	118
MmeI	TCCRAC	1 cut(s)	202
MnlI	CCTC	3 cut(s)	150, 258, 288
MslI	CAYNNNNRTG	1 cut(s)	417
MspA1I	CMGCKG	1 cut(s)	409
MwoI	GCNNNNNNNGC	1 cut(s)	443
NlaIII	CATG	1 cut(s)	416
NlaIV	GGNNCC	1 cut(s)	274
NspI	RCATGY	1 cut(s)	416
NspV	TTCGAA	1 cut(s)	71
PaeI	GCATGC	1 cut(s)	416
PaqCI	CACCTGC	1 cut(s)	146
PceI	AGGCCT	1 cut(s)	139
PkrI	GCNGC	2 cut(s)	411, 439
Psp124BI	GAGCTC	1 cut(s)	20
PspN4I	GGNNCC	1 cut(s)	274
PstI	CTGCAG	1 cut(s)	442
PvuII	CAGCTG	1 cut(s)	409
RsaI	GTAC	1 cut(s)	83
RsaNI	GTAC	1 cut(s)	82
RseI	CAYNNNNRTG	1 cut(s)	417
SacI	GAGCTC	1 cut(s)	20
SatI	GCNGC	2 cut(s)	410, 438
SduI	GDGCHC	2 cut(s)	10, 20
SfcI	CTRYAG	1 cut(s)	438
SfuI	TTCGAA	1 cut(s)	71
SmiMI	CAYNNNNRTG	1 cut(s)	417
SmlI	CTYRAG	1 cut(s)	335
SmoI	CTYRAG	1 cut(s)	335
SphI	GCATGC	1 cut(s)	416
Sse9I	AATT	1 cut(s)	118
SseBI	AGGCCT	1 cut(s)	139
SsiI	CCGC	1 cut(s)	384
SspMI	CTAG	1 cut(s)	266
SstI	GAGCTC	1 cut(s)	20
StuI	AGGCCT	1 cut(s)	139
TaqI	TCGA	1 cut(s)	71
TasI	AATT	1 cut(s)	118
TscAI	CASTG	2 cut(s)	92, 447
TseI	GCWGC	2 cut(s)	409, 437
TspDTI	ATGAA	3 cut(s)	117, 336, 468
TspRI	CASTG	2 cut(s)	92, 447
XapI	RAATTY	1 cut(s)	118
XceI	RCATGY	1 cut(s)	416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	56
XspI	CTAG	1 cut(s)	266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.