pycom16g26100

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
28352571 .. 28355157
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g26100.4

Sequence Viewer

Length: 486 bp
ATGGCTGCTGTTTCCAATTCGCTGGCTCTTACAGGATCTTCTCTGAACCCACCACAACAGTATCTTGGGAGTGTGGCCCCGACAAACTTTTCGCTCACTTCAAAACGTATTGGGAAAATTCAACTTTCTAACTCCAAGAGGTCTATCTCAGTTCAGGCTGCATATAGTGATGGTGGTAGGTCAAACAGTTCGGGTATCTTTGTTAGTGGCTTTGTTTTGGGAGGACTTATAGTTGGCACACTTGGCGCTGTCTATGCACCTCAGATCAGTAAAGCACTGGCTGGAGCTGACCGAAAGGATCTGATGAGAAAATTGCCCAAGTTCATATATGATGAAGACAAAGCTTTGGAGAAAACACGAAAAATACTGGCTGAGAAGATAGCACAGCTGAACTCTGCGATTGATGATGTTTCTGGTCAGCTCCGATCAGAGGATGACCCAGATGAAGTATCTGTGAACTCAGAAGAAGTTGAGGCTGTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

162

Amino Acids

17.02

Weight (kDa)

6.3

Isoelectric Point (pI)

35.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 43, 306
AcsI RAATTY 1 cut(s) 117
AfiI CCNNNNNNNGG 1 cut(s) 430
AgsI TTSAA 2 cut(s) 102, 122
AluBI AGCT 4 cut(s) 287, 344, 388, 421
AluI AGCT 4 cut(s) 287, 344, 388, 421
AlwI GGATC 2 cut(s) 43, 306
AoxI GGCC 1 cut(s) 75
ApeKI GCWGC 2 cut(s) 5, 158
ApoI RAATTY 1 cut(s) 117
ArsI GACNNNNNNTTYG 2 cut(s) 73, 105
AspLEI GCGC 1 cut(s) 248
AspS9I GGNCC 1 cut(s) 76
BaeI ACNNNNGTAYC 2 cut(s) 44, 77
BbsI GAAGAC 1 cut(s) 342
BbvI GCAGC 1 cut(s) 145
BccI CCATC 1 cut(s) 164
BfoI RGCGCY 1 cut(s) 249
BisI GCNGC 2 cut(s) 6, 159
BlsI GCNGC 2 cut(s) 7, 160
BmgT120I GGNCC 1 cut(s) 76
BmiI GGNNCC 1 cut(s) 78
BpiI GAAGAC 1 cut(s) 342
BpmI CTGGAG 1 cut(s) 303
Bsc4I CCNNNNNNNGG 1 cut(s) 430
Bse1I ACTGG 2 cut(s) 282, 372
BseGI GGATG 1 cut(s) 439
BseLI CCNNNNNNNGG 1 cut(s) 430
BseMII CTCAG 4 cut(s) 162, 275, 363, 474
BseNI ACTGG 2 cut(s) 282, 372
BseXI GCAGC 1 cut(s) 145
BshFI GGCC 1 cut(s) 77
BslI CCNNNNNNNGG 1 cut(s) 430
BsnI GGCC 1 cut(s) 77
Bsp143I GATC 4 cut(s) 35, 264, 298, 425
BspANI GGCC 1 cut(s) 77
BspCNI CTCAG 4 cut(s) 161, 274, 364, 473
BspLI GGNNCC 1 cut(s) 78
BspPI GGATC 2 cut(s) 43, 306
BsrI ACTGG 2 cut(s) 282, 372
BssMI GATC 4 cut(s) 35, 264, 298, 425
Bst4CI ACNGT 2 cut(s) 60, 188
BstC8I GCNNGC 1 cut(s) 24
BstDEI CTNAG 4 cut(s) 148, 261, 372, 460
BstF5I GGATG 1 cut(s) 439
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 1 cut(s) 248
BstKTI GATC 4 cut(s) 38, 267, 301, 428
BstMBI GATC 4 cut(s) 35, 264, 298, 425
BstMWI GCNNNNNNNGC 2 cut(s) 243, 254
BstV1I GCAGC 1 cut(s) 145
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 2 cut(s) 35, 298
BstXI CCANNNNNNTGG 1 cut(s) 22
BstYI RGATCY 2 cut(s) 35, 298
BsuRI GGCC 1 cut(s) 77
BtsCI GGATG 1 cut(s) 439
BtsIMutI CAGTG 1 cut(s) 275
Cac8I GCNNGC 1 cut(s) 24
CfoI GCGC 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 76
DdeI CTNAG 4 cut(s) 148, 261, 372, 460
DpnI GATC 4 cut(s) 37, 266, 300, 427
DpnII GATC 4 cut(s) 35, 264, 298, 425
FaiI YATR 8 cut(s) 163, 165, 230, 255, 326, 328, 330, 484
Fnu4HI GCNGC 2 cut(s) 6, 159
FokI GGATG 1 cut(s) 446
Fsp4HI GCNGC 2 cut(s) 6, 159
GlaI GCGC 1 cut(s) 247
GluI GCNGC 2 cut(s) 6, 159
GsuI CTGGAG 1 cut(s) 303
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 1 cut(s) 77
HhaI GCGC 1 cut(s) 248
Hin6I GCGC 1 cut(s) 246
HinP1I GCGC 1 cut(s) 246
HindIII AAGCTT 1 cut(s) 342
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 6 cut(s) 45, 264, 303, 425, 430, 463
Hpy8I GTNNAC 1 cut(s) 457
HpyCH4III ACNGT 2 cut(s) 60, 188
HpyCH4IV ACGT 1 cut(s) 106
HpyCH4V TGCA 2 cut(s) 161, 257
HpyF10VI GCNNNNNNNGC 2 cut(s) 243, 254
HpyF3I CTNAG 4 cut(s) 148, 261, 372, 460
HpySE526I ACGT 1 cut(s) 106
HspAI GCGC 1 cut(s) 246
Kzo9I GATC 4 cut(s) 35, 264, 298, 425
LmnI GCTCC 2 cut(s) 284, 426
LpnPI CCDG 8 cut(s) 8, 18, 140, 263, 267, 353, 399, 453
Lsp1109I GCAGC 1 cut(s) 145
MaeII ACGT 1 cut(s) 106
MalI GATC 4 cut(s) 37, 266, 300, 427
MboI GATC 4 cut(s) 35, 264, 298, 425
MboII GAAGA 4 cut(s) 30, 347, 388, 476
MflI RGATCY 2 cut(s) 35, 298
MluCI AATT 3 cut(s) 16, 117, 311
MnlI CCTC 5 cut(s) 132, 215, 270, 424, 466
MspA1I CMGCKG 1 cut(s) 388
MwoI GCNNNNNNNGC 2 cut(s) 243, 254
NdeII GATC 4 cut(s) 35, 264, 298, 425
NlaIV GGNNCC 1 cut(s) 78
PkrI GCNGC 2 cut(s) 7, 160
PspN4I GGNNCC 1 cut(s) 78
PspPI GGNCC 1 cut(s) 76
PsuI RGATCY 2 cut(s) 35, 298
PvuII CAGCTG 1 cut(s) 388
SatI GCNGC 2 cut(s) 6, 159
Sau3AI GATC 4 cut(s) 35, 264, 298, 425
Sau96I GGNCC 1 cut(s) 76
SetI ASST 8 cut(s) 109, 143, 182, 262, 289, 346, 390, 423
Sse9I AATT 3 cut(s) 16, 117, 311
TaaI ACNGT 2 cut(s) 60, 188
TaiI ACGT 1 cut(s) 109
TaqII GACCGA 1 cut(s) 306
TasI AATT 3 cut(s) 16, 117, 311
TscAI CASTG 1 cut(s) 282
TseI GCWGC 2 cut(s) 5, 158
TspDTI ATGAA 3 cut(s) 313, 348, 459
TspRI CASTG 1 cut(s) 282
XapI RAATTY 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.