Prupe.7G218500_v2.0.a1

Protein of unknown function (DUF4005)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
19654234 .. 19656518
2285 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G218500.2

Sequence Viewer

Length: 1272 bp
ATGGGCAGAGCAACAAGGTGGTTCAAGGGGTTGTTTGGAATTAAGACCAAAGACAAAGAGTACAAAGCAAATTCAAGTAGTGACTTCAAAGACACGAAAGGGTCAAGCTTTGGGAGAGAAGATGCAACCCTACTGTGTCACAACCCAGCCACTATACCTCCCAACATATCACCATCTGAAGCAGCTTGGCTGAGATCATACTACAATGAAACAGAGGAGGAGCAGAACAAGCACGCAATTGCTGTGGCAGCTGCGACGGCCGCCGCTGCTGATGCAGCAGTTGCTGCAGCTAACGCGGCCGTGGCGGTTGTCCGCCTCACCAGTCATGGCAGAGGCACCATGTTTGGTGGTGGAAGAGAAAGATGGGCCGCTGTGAAAGTTCAAACTGTTTTTAGAGGCTATTTGGCCCGAAAAGCACTTAGAGCTCTGAAAGGACTGGTGAAGTTGCAGGCGCTAGTTAGAGGGTATTTAGTGAGGAAGCAGGCCACGGCAACTCTGCACAGTATGCAAGCTCTCATTAGAGCACAAGCCACAGTTCGTTCTCATAAAACTCGGGGGCTCATCAACACTACCACCAACAACATTGAAGCCAATAGCAGATTTGAAATCCGTGCACGAAAATCCATGGAGAGATTTGATGACACTGGGAGTGAGCACACAGCTCCAAGCCACAGCAGAAGGCTCTCTGCTTCTAATTTGGACGCCAATATTGATGAAAGTCCCAAGATTGTGGAGGTTGATACAGGCAGGCCTAAATCTAGGTCACGCAGAACAAACACTTGTGTATCTGAATTCAGTGACGACCCAACTTACCAACAAGCACTGTCTTCTCCAATCCCATGTAGAGGACCTGCCCGGCTATCGATCCCCGATAGCCGGAATTTCCCAGAATCCGACTGGGGACTAGCTGGAGATGAATGCAGATTCGTTTCCACAGCACAAAGCACACCGCGGTTTGTGAATTCATGTGGGGCTAGTAATTTGCCTGGCACACCTTCAAAGAGTGTTTGTGCTGACAATTTTTTCAGAGGGTATGCTCCAAATTACATGGCGAGCACTCAGTCTTTCAAGGCCAAGTTGAGGTCTCATAGTGCTCCTAAGCAGAGGCCAGATACAGGGCCAAAGAGGAGACTTTCACTTCATGAAATGTTGGAGTCAAGAAATAGTCTAAGTGGGGTGAGGATGCAGAGGTCTTGTTCACAAGCTCAGGATGCCATTAATTTCAAGAATGCTATAATGAGCAAGCTTGATAGGTCCTCTGGAATCTTGTAA

Protein Analysis

424

Amino Acids

46.32

Weight (kDa)

10.11

Isoelectric Point (pI)

51.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 859
AccB1I GGYRCC 1 cut(s) 335
AccII CGCG 2 cut(s) 296, 952
AciI CCGC 8 cut(s) 261, 264, 296, 305, 313, 369, 950, 952
AclWI GGATC 1 cut(s) 859
AcoI YGGCCR 2 cut(s) 258, 297
AcsI RAATTY 4 cut(s) 70, 791, 880, 961
AcuI CTGAAG 1 cut(s) 198
AcyI GRCGYC 1 cut(s) 702
AfaI GTAC 1 cut(s) 62
AfiI CCNNNNNNNGG 4 cut(s) 845, 876, 1080, 1115
AgsI TTSAA 9 cut(s) 25, 75, 88, 383, 587, 605, 999, 1069, 1225
AjnI CCWGG 1 cut(s) 985
Alw21I GWGCWC 6 cut(s) 427, 526, 616, 657, 1058, 1096
Alw26I GTCTC 2 cut(s) 1089, 1123
Alw44I GTGCAC 1 cut(s) 612
AlwI GGATC 1 cut(s) 859
AlwNI CAGNNNCTG 1 cut(s) 284
Ama87I CYCGRG 1 cut(s) 552
AoxI GGCC 9 cut(s) 258, 297, 366, 405, 483, 749, 1071, 1106, 1118
ApaLI GTGCAC 1 cut(s) 612
ApeKI GCWGC 7 cut(s) 182, 248, 251, 266, 275, 284, 287
ApoI RAATTY 4 cut(s) 70, 791, 880, 961
AseI ATTAAT 1 cut(s) 1218
AspLEI GCGC 1 cut(s) 454
AspS9I GGNCC 5 cut(s) 366, 406, 848, 1118, 1254
AsuC2I CCSGG 1 cut(s) 856
AsuHPI GGTGA 4 cut(s) 162, 310, 451, 1189
AvaI CYCGRG 1 cut(s) 552
AvaII GGWCC 2 cut(s) 848, 1254
BaeGI GKGCMC 1 cut(s) 616
BaeI ACNNNNGTAYC 2 cut(s) 768, 801
BanI GGYRCC 1 cut(s) 335
BanII GRGCYC 2 cut(s) 427, 561
BbsI GAAGAC 1 cut(s) 819
Bbv12I GWGCWC 6 cut(s) 427, 526, 616, 657, 1058, 1096
BbvI GCAGC 7 cut(s) 194, 238, 253, 260, 271, 287, 299
BccI CCATC 2 cut(s) 181, 357
BceAI ACGGC 3 cut(s) 273, 284, 504
BciT130I CCWGG 1 cut(s) 987
BcnI CCSGG 1 cut(s) 856
BcoDI GTCTC 2 cut(s) 1089, 1123
BfaI CTAG 4 cut(s) 455, 759, 905, 975
BfmI CTRYAG 1 cut(s) 285
BfoI RGCGCY 1 cut(s) 455
BfuAI ACCTGC 1 cut(s) 859
Bme1390I CCNGG 2 cut(s) 856, 987
Bme18I GGWCC 2 cut(s) 848, 1254
BmeT110I CYCGRG 1 cut(s) 552
BmgT120I GGNCC 5 cut(s) 366, 406, 848, 1118, 1254
BmiI GGNNCC 1 cut(s) 337
BmrFI CCNGG 2 cut(s) 856, 987
BmrI ACTGGG 2 cut(s) 654, 907
BmsI GCATC 4 cut(s) 112, 262, 1173, 1201
BmuI ACTGGG 2 cut(s) 654, 907
BpiI GAAGAC 1 cut(s) 819
BpmI CTGGAG 1 cut(s) 930
Bpu10I CCTNAGC 2 cut(s) 1098, 1206
BpuMI CCSGG 1 cut(s) 856
Bsa29I ATCGAT 1 cut(s) 863
BsaHI GRCGYC 1 cut(s) 702
BsaI GGTCTC 1 cut(s) 1089
BsaJI CCNNGG 4 cut(s) 300, 486, 624, 950
BsaXI ACNNNNNCTCC 2 cut(s) 142, 172
Bsc4I CCNNNNNNNGG 4 cut(s) 845, 876, 1080, 1115
Bse1I ACTGG 4 cut(s) 321, 441, 649, 902
BseBI CCWGG 1 cut(s) 987
BseCI ATCGAT 1 cut(s) 863
BseDI CCNNGG 4 cut(s) 300, 486, 624, 950
BseGI GGATG 2 cut(s) 1188, 1216
BseLI CCNNNNNNNGG 4 cut(s) 845, 876, 1080, 1115
BseMII CTCAG 3 cut(s) 182, 1073, 1220
BseNI ACTGG 4 cut(s) 321, 441, 649, 902
BseRI GAGGAG 3 cut(s) 230, 233, 1141
BseSI GKGCMC 1 cut(s) 616
BseX3I CGGCCG 2 cut(s) 258, 297
BseXI GCAGC 7 cut(s) 194, 238, 253, 260, 271, 287, 299
BseYI CCCAGC 1 cut(s) 145
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 2 cut(s) 296, 952
Bsh1285I CGRYCG 2 cut(s) 261, 300
BshFI GGCC 9 cut(s) 260, 299, 368, 407, 485, 751, 1073, 1108, 1120
BshNI GGYRCC 1 cut(s) 335
BshVI ATCGAT 1 cut(s) 863
BsiEI CGRYCG 2 cut(s) 261, 300
BsiHKAI GWGCWC 6 cut(s) 427, 526, 616, 657, 1058, 1096
BsiHKCI CYCGRG 1 cut(s) 552
BsiSI CCGG 2 cut(s) 856, 877
BslFI GGGAC 2 cut(s) 705, 915
BslI CCNNNNNNNGG 4 cut(s) 845, 876, 1080, 1115
BsmAI GTCTC 2 cut(s) 1089, 1123
BsmFI GGGAC 2 cut(s) 705, 915
BsmI GAATGC 2 cut(s) 923, 1234
BsnI GGCC 9 cut(s) 260, 299, 368, 407, 485, 751, 1073, 1108, 1120
Bso31I GGTCTC 1 cut(s) 1089
BsoBI CYCGRG 1 cut(s) 552
Bsp1286I GDGCHC 7 cut(s) 427, 526, 561, 616, 657, 1058, 1096
Bsp143I GATC 2 cut(s) 194, 864
Bsp19I CCATGG 1 cut(s) 624
BspACI CCGC 8 cut(s) 261, 264, 296, 305, 313, 369, 950, 952
BspANI GGCC 9 cut(s) 260, 299, 368, 407, 485, 751, 1073, 1108, 1120
BspCNI CTCAG 3 cut(s) 183, 1072, 1219
BspDI ATCGAT 1 cut(s) 863
BspFNI CGCG 2 cut(s) 296, 952
BspHI TCATGA 1 cut(s) 1141
BspLI GGNNCC 1 cut(s) 337
BspMAI CTGCAG 1 cut(s) 289
BspMI ACCTGC 1 cut(s) 859
BspPI GGATC 1 cut(s) 859
BspT107I GGYRCC 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 1089
BsrI ACTGG 4 cut(s) 321, 441, 649, 902
BssECI CCNNGG 4 cut(s) 300, 486, 624, 950
BssMI GATC 2 cut(s) 194, 864
BssNI GRCGYC 1 cut(s) 702
BssT1I CCWWGG 1 cut(s) 624
Bst2UI CCWGG 1 cut(s) 987
Bst4CI ACNGT 5 cut(s) 135, 388, 503, 535, 825
Bst6I CTCTTC 1 cut(s) 349
BstACI GRCGYC 1 cut(s) 702
BstAPI GCANNNNNTGC 3 cut(s) 281, 284, 505
BstC8I GCNNGC 7 cut(s) 234, 450, 483, 510, 749, 1054, 1244
BstDEI CTNAG 6 cut(s) 191, 419, 1059, 1098, 1169, 1206
BstDSI CCRYGG 4 cut(s) 300, 486, 624, 950
BstF5I GGATG 2 cut(s) 1188, 1216
BstFNI CGCG 2 cut(s) 296, 952
BstH2I RGCGCY 1 cut(s) 455
BstHHI GCGC 1 cut(s) 454
BstKTI GATC 2 cut(s) 197, 867
BstMAI GTCTC 2 cut(s) 1089, 1123
BstMBI GATC 2 cut(s) 194, 864
BstMCI CGRYCG 2 cut(s) 261, 300
BstNI CCWGG 1 cut(s) 987
BstSCI CCNGG 2 cut(s) 854, 985
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 1 cut(s) 616
BstUI CGCG 2 cut(s) 296, 952
BstV1I GCAGC 7 cut(s) 194, 238, 253, 260, 271, 287, 299
BstV2I GAAGAC 1 cut(s) 819
BstXI CCANNNNNNTGG 1 cut(s) 730
BstZI CGGCCG 2 cut(s) 258, 297
Bsu15I ATCGAT 1 cut(s) 863
BsuRI GGCC 9 cut(s) 260, 299, 368, 407, 485, 751, 1073, 1108, 1120
BsuTUI ATCGAT 1 cut(s) 863
BtgI CCRYGG 4 cut(s) 300, 486, 624, 950
BtsCI GGATG 2 cut(s) 1188, 1216
BtsIMutI CAGTG 3 cut(s) 642, 802, 821
BveI ACCTGC 1 cut(s) 859
Cac8I GCNNGC 7 cut(s) 234, 450, 483, 510, 749, 1054, 1244
CaiI CAGNNNCTG 1 cut(s) 284
CciI TCATGA 1 cut(s) 1141
CfoI GCGC 1 cut(s) 454
Cfr13I GGNCC 5 cut(s) 366, 406, 848, 1118, 1254
Cfr42I CCGCGG 1 cut(s) 953
ClaI ATCGAT 1 cut(s) 863
CseI GACGC 1 cut(s) 710
Csp6I GTAC 1 cut(s) 61
CspCI CAANNNNNGTGG 2 cut(s) 225, 260
CviAII CATG 7 cut(s) 326, 340, 625, 840, 966, 1048, 1142
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 6 cut(s) 191, 419, 1059, 1098, 1169, 1206
DpnI GATC 2 cut(s) 196, 866
DpnII GATC 2 cut(s) 194, 864
EaeI YGGCCR 2 cut(s) 258, 297
EagI CGGCCG 2 cut(s) 258, 297
Eam1104I CTCTTC 1 cut(s) 349
EarI CTCTTC 1 cut(s) 349
EciI GGCGGA 1 cut(s) 302
Ecl136II GAGCTC 1 cut(s) 425
EclXI CGGCCG 2 cut(s) 258, 297
Eco130I CCWWGG 1 cut(s) 624
Eco147I AGGCCT 1 cut(s) 751
Eco24I GRGCYC 2 cut(s) 427, 561
Eco31I GGTCTC 1 cut(s) 1089
Eco47I GGWCC 2 cut(s) 848, 1254
Eco52I CGGCCG 2 cut(s) 258, 297
Eco53kI GAGCTC 1 cut(s) 425
Eco57I CTGAAG 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 552
EcoICRI GAGCTC 1 cut(s) 425
EcoO109I RGGNCCY 2 cut(s) 848, 1254
EcoRI GAATTC 2 cut(s) 791, 961
EcoRII CCWGG 1 cut(s) 985
EcoT14I CCWWGG 1 cut(s) 624
EcoT38I GRGCYC 2 cut(s) 427, 561
ErhI CCWWGG 1 cut(s) 624
FaeI CATG 7 cut(s) 329, 343, 628, 843, 969, 1051, 1145
FaqI GGGAC 2 cut(s) 705, 915
FatI CATG 7 cut(s) 325, 339, 624, 839, 965, 1047, 1141
FokI GGATG 2 cut(s) 1195, 1223
FriOI GRGCYC 2 cut(s) 427, 561
FspBI CTAG 4 cut(s) 455, 759, 905, 975
GlaI GCGC 1 cut(s) 453
GsaI CCCAGC 1 cut(s) 149
GsuI CTGGAG 1 cut(s) 930
HaeII RGCGCY 1 cut(s) 455
HaeIII GGCC 9 cut(s) 260, 299, 368, 407, 485, 751, 1073, 1108, 1120
HapII CCGG 2 cut(s) 856, 877
HgaI GACGC 1 cut(s) 710
HhaI GCGC 1 cut(s) 454
Hin1I GRCGYC 1 cut(s) 702
Hin1II CATG 7 cut(s) 329, 343, 628, 843, 969, 1051, 1145
Hin6I GCGC 1 cut(s) 452
HinP1I GCGC 1 cut(s) 452
HindIII AAGCTT 2 cut(s) 106, 1244
HinfI GANTC 4 cut(s) 890, 924, 1154, 1263
HpaII CCGG 2 cut(s) 856, 877
HphI GGTGA 4 cut(s) 162, 310, 451, 1189
Hpy166II GTNNAC 2 cut(s) 614, 1199
Hpy188I TCNGA 5 cut(s) 178, 429, 790, 895, 1028
Hpy188III TCNNGA 5 cut(s) 1142, 1158, 1208, 1225, 1260
Hpy8I GTNNAC 2 cut(s) 614, 1199
Hpy99I CGWCG 1 cut(s) 259
HpyAV CCTTC 2 cut(s) 672, 1005
HpyCH4III ACNGT 5 cut(s) 135, 388, 503, 535, 825
HpyCH4V TGCA 9 cut(s) 125, 275, 287, 448, 499, 508, 614, 921, 1186
HpyF3I CTNAG 6 cut(s) 191, 419, 1059, 1098, 1169, 1206
Hsp92I GRCGYC 1 cut(s) 702
Hsp92II CATG 7 cut(s) 329, 343, 628, 843, 969, 1051, 1145
HspAI GCGC 1 cut(s) 452
KspI CCGCGG 1 cut(s) 953
Kzo9I GATC 2 cut(s) 194, 864
LmnI GCTCC 4 cut(s) 220, 667, 1042, 1099
Lsp1109I GCAGC 7 cut(s) 194, 238, 253, 260, 271, 287, 299
LweI GCATC 4 cut(s) 112, 262, 1173, 1201
MaeI CTAG 4 cut(s) 455, 759, 905, 975
MaeIII GTNAC 4 cut(s) 80, 137, 762, 797
MalI GATC 2 cut(s) 196, 866
MboI GATC 2 cut(s) 194, 864
MboII GAAGA 3 cut(s) 131, 366, 819
MfeI CAATTG 1 cut(s) 237
MhlI GDGCHC 7 cut(s) 427, 526, 561, 616, 657, 1058, 1096
MlyI GAGTC 1 cut(s) 1163
MmeI TCCRAC 2 cut(s) 918, 1131
MseI TTAA 2 cut(s) 42, 1218
MspA1I CMGCKG 4 cut(s) 251, 266, 371, 952
MspI CCGG 2 cut(s) 856, 877
MspR9I CCNGG 2 cut(s) 856, 987
MunI CAATTG 1 cut(s) 237
Mva1269I GAATGC 2 cut(s) 923, 1234
MvaI CCWGG 1 cut(s) 987
MvnI CGCG 2 cut(s) 296, 952
NciI CCSGG 1 cut(s) 856
NcoI CCATGG 1 cut(s) 624
NdeII GATC 2 cut(s) 194, 864
NlaIII CATG 7 cut(s) 329, 343, 628, 843, 969, 1051, 1145
NlaIV GGNNCC 1 cut(s) 337
NmuCI GTSAC 4 cut(s) 80, 137, 762, 797
PagI TCATGA 1 cut(s) 1141
PceI AGGCCT 1 cut(s) 751
PctI GAATGC 2 cut(s) 923, 1234
PfeI GAWTC 3 cut(s) 890, 924, 1263
PleI GAGTC 1 cut(s) 1162
PpsI GAGTC 1 cut(s) 1162
PpuMI RGGWCCY 2 cut(s) 848, 1254
PshBI ATTAAT 1 cut(s) 1218
Psp124BI GAGCTC 1 cut(s) 427
Psp5II RGGWCCY 2 cut(s) 848, 1254
Psp6I CCWGG 1 cut(s) 985
PspFI CCCAGC 1 cut(s) 145
PspGI CCWGG 1 cut(s) 985
PspN4I GGNNCC 1 cut(s) 337
PspPI GGNCC 5 cut(s) 366, 406, 848, 1118, 1254
PspPPI RGGWCCY 2 cut(s) 848, 1254
PstI CTGCAG 1 cut(s) 289
PstNI CAGNNNCTG 1 cut(s) 284
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
SacI GAGCTC 1 cut(s) 427
SacII CCGCGG 1 cut(s) 953
SaqAI TTAA 2 cut(s) 42, 1218
Sau3AI GATC 2 cut(s) 194, 864
Sau96I GGNCC 5 cut(s) 366, 406, 848, 1118, 1254
SchI GAGTC 1 cut(s) 1163
ScrFI CCNGG 2 cut(s) 856, 987
SduI GDGCHC 7 cut(s) 427, 526, 561, 616, 657, 1058, 1096
SfaNI GCATC 4 cut(s) 112, 262, 1173, 1201
SfcI CTRYAG 1 cut(s) 285
Sfr303I CCGCGG 1 cut(s) 953
SgrBI CCGCGG 1 cut(s) 953
SinI GGWCC 2 cut(s) 848, 1254
SseBI AGGCCT 1 cut(s) 751
SsiI CCGC 8 cut(s) 261, 264, 296, 305, 313, 369, 950, 952
SspI AATATT 1 cut(s) 709
SspMI CTAG 4 cut(s) 455, 759, 905, 975
SstI GAGCTC 1 cut(s) 427
StuI AGGCCT 1 cut(s) 751
StyD4I CCNGG 2 cut(s) 854, 985
StyI CCWWGG 1 cut(s) 624
TaaI ACNGT 5 cut(s) 135, 388, 503, 535, 825
TaqI TCGA 1 cut(s) 863
TatI WGTACW 1 cut(s) 60
TauI GCSGC 4 cut(s) 263, 266, 299, 371
TfiI GAWTC 3 cut(s) 890, 924, 1263
Tru1I TTAA 2 cut(s) 42, 1218
Tru9I TTAA 2 cut(s) 42, 1218
TscAI CASTG 3 cut(s) 649, 802, 828
TseFI GTSAC 4 cut(s) 80, 137, 762, 797
TseI GCWGC 7 cut(s) 182, 248, 251, 266, 275, 284, 287
Tsp45I GTSAC 4 cut(s) 80, 137, 762, 797
TspDTI ATGAA 6 cut(s) 222, 729, 930, 954, 1130, 1158
TspGWI ACGGA 1 cut(s) 599
TspRI CASTG 3 cut(s) 649, 802, 828
VneI GTGCAC 1 cut(s) 612
VpaK11BI GGWCC 2 cut(s) 848, 1254
VspI ATTAAT 1 cut(s) 1218
XapI RAATTY 4 cut(s) 70, 791, 880, 961
XcmI CCANNNNNNNNNTGG 1 cut(s) 894
XspI CTAG 4 cut(s) 455, 759, 905, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.