iq-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16490 |
| fragaria_vesca | FvH4_1g06300 FvH4_6g32490 FvH4_6g32490 FvH4_6g32490 |
| malus_domestica | MD02G1066900.v1.1 MD09G1201900.v1.1 MD15G1197400.v1.1 MD17G1182000.v1.1 |
| prunus_persica | Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.7G218500_v2.0.a1 Prupe.7G218500_v2.0.a1 |
| pyrus_communis | pycom02g05290 pycom09g11870 pycom17g19160 |
| rosa_chinensis | RchiOBHm_Chr2g0092031 RchiOBHm_Chr2g0140781 |
| rosa_laevigata | RLG00000016269 RLG00000019897 |
| rosa_multiflora | Rmu_sc0000524.1_g000003 Rmu_sc0003342.1_g000033 |
| rosa_roxburghii | Rroxscaffold_2G00104500 Rroxscaffold_2G00149540 |
| rosa_rugosa | Rorug02G0022400 Rorug02G0022400 Rorug02G0365100 Rorug02G0365200 |
| rosa_samantha | Rh2AG068000 Rh2AG416500 Rh2BG067400 Rh2BG426000 Rh2CG068700 Rh2CG402700 Rh2DG067000 Rh2DG436000 |
| rosa_wichuraiana | Rw2G005310 Rw2G034070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 648 |
| Acc36I | ACCTGC | 2 cut(s) | 648, 801 |
| AccI | GTMKAC | 1 cut(s) | 63 |
| AccII | CGCG | 1 cut(s) | 562 |
| AccIII | TCCGGA | 1 cut(s) | 483 |
| AclWI | GGATC | 4 cut(s) | 186, 356, 738, 1062 |
| AcoI | YGGCCR | 3 cut(s) | 249, 279, 328 |
| AcsI | RAATTY | 2 cut(s) | 157, 647 |
| AfaI | GTAC | 1 cut(s) | 887 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 90, 126, 490, 1100 |
| AflIII | ACRYGT | 1 cut(s) | 1032 |
| AgsI | TTSAA | 9 cut(s) | 25, 392, 574, 623, 632, 736, 763, 881, 892 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 3 cut(s) | 182, 746, 1099 |
| AluBI | AGCT | 5 cut(s) | 11, 114, 521, 696, 999 |
| AluI | AGCT | 5 cut(s) | 11, 114, 521, 696, 999 |
| Alw21I | GWGCWC | 2 cut(s) | 436, 535 |
| Alw26I | GTCTC | 2 cut(s) | 756, 987 |
| AlwI | GGATC | 4 cut(s) | 186, 356, 738, 1062 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 245, 263, 1155 |
| Aor13HI | TCCGGA | 1 cut(s) | 483 |
| AoxI | GGCC | 6 cut(s) | 249, 279, 328, 1007, 1091, 1103 |
| ApeKI | GCWGC | 9 cut(s) | 245, 257, 263, 377, 494, 497, 820, 1139, 1158 |
| ApoI | RAATTY | 2 cut(s) | 157, 647 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1019, 1051 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 587 |
| AspLEI | GCGC | 3 cut(s) | 427, 562, 1079 |
| AspS9I | GGNCC | 1 cut(s) | 1103 |
| AsuC2I | CCSGG | 2 cut(s) | 610, 966 |
| AsuHPI | GGTGA | 2 cut(s) | 807, 908 |
| AsuII | TTCGAA | 1 cut(s) | 1165 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 541, 574 |
| BbsI | GAAGAC | 1 cut(s) | 795 |
| Bbv12I | GWGCWC | 2 cut(s) | 436, 535 |
| BbvI | GCAGC | 9 cut(s) | 232, 250, 269, 364, 481, 484, 807, 1151, 1170 |
| BccI | CCATC | 3 cut(s) | 366, 982, 1129 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 587, 621 |
| BciT130I | CCWGG | 3 cut(s) | 184, 748, 1101 |
| BcnI | CCSGG | 2 cut(s) | 610, 966 |
| BcoDI | GTCTC | 2 cut(s) | 756, 987 |
| BfmI | CTRYAG | 1 cut(s) | 1156 |
| BfoI | RGCGCY | 1 cut(s) | 1080 |
| BfuAI | ACCTGC | 2 cut(s) | 648, 801 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 278, 290 |
| Bme1390I | CCNGG | 5 cut(s) | 184, 610, 748, 966, 1101 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 1 cut(s) | 1103 |
| BmiI | GGNNCC | 2 cut(s) | 590, 1098 |
| BmrFI | CCNGG | 5 cut(s) | 184, 610, 748, 966, 1101 |
| BmsI | GCATC | 4 cut(s) | 259, 625, 1161, 1180 |
| BoxI | GACNNNNGTC | 1 cut(s) | 542 |
| BpiI | GAAGAC | 1 cut(s) | 795 |
| Bpu14I | TTCGAA | 1 cut(s) | 1165 |
| BpuEI | CTTGAG | 1 cut(s) | 855 |
| BpuMI | CCSGG | 2 cut(s) | 610, 966 |
| Bsa29I | ATCGAT | 1 cut(s) | 1174 |
| BsaI | GGTCTC | 1 cut(s) | 756 |
| BsaJI | CCNNGG | 3 cut(s) | 331, 932, 1100 |
| BsaWI | WCCGGW | 2 cut(s) | 90, 483 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 90, 126, 490, 1100 |
| Bse1I | ACTGG | 1 cut(s) | 450 |
| Bse3DI | GCAATG | 1 cut(s) | 387 |
| BseAI | TCCGGA | 1 cut(s) | 483 |
| BseBI | CCWGG | 3 cut(s) | 184, 748, 1101 |
| BseCI | ATCGAT | 1 cut(s) | 1174 |
| BseDI | CCNNGG | 3 cut(s) | 331, 932, 1100 |
| BseGI | GGATG | 1 cut(s) | 45 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 90, 126, 490, 1100 |
| BseMI | GCAATG | 1 cut(s) | 387 |
| BseMII | CTCAG | 2 cut(s) | 202, 1058 |
| BseNI | ACTGG | 1 cut(s) | 450 |
| BseRI | GAGGAG | 1 cut(s) | 802 |
| BseXI | GCAGC | 9 cut(s) | 232, 250, 269, 364, 481, 484, 807, 1151, 1170 |
| BseYI | CCCAGC | 1 cut(s) | 34 |
| Bsh1236I | CGCG | 1 cut(s) | 562 |
| Bsh1285I | CGRYCG | 2 cut(s) | 91, 1178 |
| BshFI | GGCC | 6 cut(s) | 251, 281, 330, 1009, 1093, 1105 |
| BshVI | ATCGAT | 1 cut(s) | 1174 |
| BsiEI | CGRYCG | 2 cut(s) | 91, 1178 |
| BsiHKAI | GWGCWC | 2 cut(s) | 436, 535 |
| BsiSI | CCGG | 5 cut(s) | 91, 484, 610, 966, 1094 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 90, 126, 490, 1100 |
| BsmAI | GTCTC | 2 cut(s) | 756, 987 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsmI | GAATGC | 3 cut(s) | 908, 1161, 1173 |
| BsnI | GGCC | 6 cut(s) | 251, 281, 330, 1009, 1093, 1105 |
| Bso31I | GGTCTC | 1 cut(s) | 756 |
| Bsp119I | TTCGAA | 1 cut(s) | 1165 |
| Bsp1286I | GDGCHC | 2 cut(s) | 436, 535 |
| Bsp13I | TCCGGA | 1 cut(s) | 483 |
| Bsp143I | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| Bsp19I | CCATGG | 1 cut(s) | 331 |
| BspANI | GGCC | 6 cut(s) | 251, 281, 330, 1009, 1093, 1105 |
| BspCNI | CTCAG | 2 cut(s) | 201, 1057 |
| BspDI | ATCGAT | 1 cut(s) | 1174 |
| BspEI | TCCGGA | 1 cut(s) | 483 |
| BspFNI | CGCG | 1 cut(s) | 562 |
| BspLI | GGNNCC | 2 cut(s) | 590, 1098 |
| BspMAI | CTGCAG | 1 cut(s) | 1160 |
| BspMI | ACCTGC | 2 cut(s) | 648, 801 |
| BspPI | GGATC | 4 cut(s) | 186, 356, 738, 1062 |
| BspT104I | TTCGAA | 1 cut(s) | 1165 |
| BspTNI | GGTCTC | 1 cut(s) | 756 |
| BsrDI | GCAATG | 1 cut(s) | 387 |
| BsrI | ACTGG | 1 cut(s) | 450 |
| BssECI | CCNNGG | 3 cut(s) | 331, 932, 1100 |
| BssMI | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| BssT1I | CCWWGG | 1 cut(s) | 331 |
| Bst2UI | CCWGG | 3 cut(s) | 184, 748, 1101 |
| Bst4CI | ACNGT | 6 cut(s) | 79, 397, 431, 512, 544, 936 |
| Bst6I | CTCTTC | 2 cut(s) | 38, 1106 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 245, 263 |
| BstBI | TTCGAA | 1 cut(s) | 1165 |
| BstC8I | GCNNGC | 5 cut(s) | 32, 231, 459, 519, 558 |
| BstDEI | CTNAG | 4 cut(s) | 188, 437, 1044, 1107 |
| BstDSI | CCRYGG | 2 cut(s) | 331, 932 |
| BstF5I | GGATG | 1 cut(s) | 45 |
| BstFNI | CGCG | 1 cut(s) | 562 |
| BstH2I | RGCGCY | 1 cut(s) | 1080 |
| BstHHI | GCGC | 3 cut(s) | 427, 562, 1079 |
| BstKTI | GATC | 6 cut(s) | 194, 351, 746, 781, 1070, 1178 |
| BstMAI | GTCTC | 2 cut(s) | 756, 987 |
| BstMBI | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| BstMCI | CGRYCG | 2 cut(s) | 91, 1178 |
| BstNI | CCWGG | 3 cut(s) | 184, 748, 1101 |
| BstNSI | RCATGY | 1 cut(s) | 1036 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 542 |
| BstSCI | CCNGG | 5 cut(s) | 182, 608, 746, 964, 1099 |
| BstSFI | CTRYAG | 1 cut(s) | 1156 |
| BstUI | CGCG | 1 cut(s) | 562 |
| BstV1I | GCAGC | 9 cut(s) | 232, 250, 269, 364, 481, 484, 807, 1151, 1170 |
| BstV2I | GAAGAC | 1 cut(s) | 795 |
| BstX2I | RGATCY | 3 cut(s) | 191, 743, 1067 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 338 |
| BstYI | RGATCY | 3 cut(s) | 191, 743, 1067 |
| Bsu15I | ATCGAT | 1 cut(s) | 1174 |
| BsuRI | GGCC | 6 cut(s) | 251, 281, 330, 1009, 1093, 1105 |
| BsuTUI | ATCGAT | 1 cut(s) | 1174 |
| BtgI | CCRYGG | 2 cut(s) | 331, 932 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsCI | GGATG | 1 cut(s) | 45 |
| BtsI | GCAGTG | 1 cut(s) | 246 |
| BtsIMutI | CAGTG | 1 cut(s) | 246 |
| BveI | ACCTGC | 2 cut(s) | 648, 801 |
| Cac8I | GCNNGC | 5 cut(s) | 32, 231, 459, 519, 558 |
| CaiI | CAGNNNCTG | 3 cut(s) | 245, 263, 1155 |
| CfoI | GCGC | 3 cut(s) | 427, 562, 1079 |
| Cfr13I | GGNCC | 1 cut(s) | 1103 |
| ClaI | ATCGAT | 1 cut(s) | 1174 |
| CseI | GACGC | 1 cut(s) | 551 |
| Csp6I | GTAC | 1 cut(s) | 886 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 222, 257 |
| CviAII | CATG | 3 cut(s) | 332, 352, 1033 |
| CviQI | GTAC | 1 cut(s) | 886 |
| DdeI | CTNAG | 4 cut(s) | 188, 437, 1044, 1107 |
| DpnI | GATC | 6 cut(s) | 193, 350, 745, 780, 1069, 1177 |
| DpnII | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| EaeI | YGGCCR | 3 cut(s) | 249, 279, 328 |
| Eam1104I | CTCTTC | 2 cut(s) | 38, 1106 |
| EarI | CTCTTC | 2 cut(s) | 38, 1106 |
| EciI | GGCGGA | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 1 cut(s) | 331 |
| Eco31I | GGTCTC | 1 cut(s) | 756 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1103 |
| EcoRII | CCWGG | 3 cut(s) | 182, 746, 1099 |
| EcoT14I | CCWWGG | 1 cut(s) | 331 |
| EcoT22I | ATGCAT | 1 cut(s) | 1173 |
| ErhI | CCWWGG | 1 cut(s) | 331 |
| FaeI | CATG | 3 cut(s) | 335, 355, 1036 |
| FaiI | YATR | 9 cut(s) | 333, 353, 515, 654, 678, 770, 851, 924, 1034 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FatI | CATG | 3 cut(s) | 331, 351, 1032 |
| FauI | CCCGC | 1 cut(s) | 338 |
| FblI | GTMKAC | 1 cut(s) | 63 |
| FokI | GGATG | 1 cut(s) | 52 |
| GlaI | GCGC | 3 cut(s) | 426, 561, 1078 |
| GsaI | CCCAGC | 1 cut(s) | 38 |
| HaeII | RGCGCY | 1 cut(s) | 1080 |
| HaeIII | GGCC | 6 cut(s) | 251, 281, 330, 1009, 1093, 1105 |
| HapII | CCGG | 5 cut(s) | 91, 484, 610, 966, 1094 |
| HgaI | GACGC | 1 cut(s) | 551 |
| HhaI | GCGC | 3 cut(s) | 427, 562, 1079 |
| Hin1II | CATG | 3 cut(s) | 335, 355, 1036 |
| Hin6I | GCGC | 3 cut(s) | 425, 560, 1077 |
| HinP1I | GCGC | 3 cut(s) | 425, 560, 1077 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HinfI | GANTC | 4 cut(s) | 176, 206, 388, 759 |
| HpaII | CCGG | 5 cut(s) | 91, 484, 610, 966, 1094 |
| HphI | GGTGA | 2 cut(s) | 807, 908 |
| Hpy166II | GTNNAC | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 5 cut(s) | 191, 211, 404, 548, 778 |
| Hpy188III | TCNNGA | 4 cut(s) | 484, 872, 913, 1065 |
| Hpy8I | GTNNAC | 1 cut(s) | 64 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 567 |
| HpyAV | CCTTC | 4 cut(s) | 19, 88, 208, 415 |
| HpyCH4III | ACNGT | 6 cut(s) | 79, 397, 431, 512, 544, 936 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyF3I | CTNAG | 4 cut(s) | 188, 437, 1044, 1107 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92II | CATG | 3 cut(s) | 335, 355, 1036 |
| HspAI | GCGC | 3 cut(s) | 425, 560, 1077 |
| Kpn2I | TCCGGA | 1 cut(s) | 483 |
| Kzo9I | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| LmnI | GCTCC | 3 cut(s) | 111, 217, 967 |
| Lsp1109I | GCAGC | 9 cut(s) | 232, 250, 269, 364, 481, 484, 807, 1151, 1170 |
| LweI | GCATC | 4 cut(s) | 259, 625, 1161, 1180 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MalI | GATC | 6 cut(s) | 193, 350, 745, 780, 1069, 1177 |
| MboI | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| MfeI | CAATTG | 1 cut(s) | 234 |
| MflI | RGATCY | 3 cut(s) | 191, 743, 1067 |
| MhlI | GDGCHC | 2 cut(s) | 436, 535 |
| MluCI | AATT | 5 cut(s) | 157, 234, 647, 714, 723 |
| MlyI | GAGTC | 2 cut(s) | 170, 215 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| Mph1103I | ATGCAT | 1 cut(s) | 1173 |
| MroI | TCCGGA | 1 cut(s) | 483 |
| MroXI | GAANNNNTTC | 1 cut(s) | 587 |
| MseI | TTAA | 4 cut(s) | 138, 450, 1053, 1125 |
| MslI | CAYNNNNRTG | 2 cut(s) | 336, 1166 |
| MspA1I | CMGCKG | 3 cut(s) | 263, 275, 820 |
| MspI | CCGG | 5 cut(s) | 91, 484, 610, 966, 1094 |
| MspR9I | CCNGG | 5 cut(s) | 184, 610, 748, 966, 1101 |
| MunI | CAATTG | 1 cut(s) | 234 |
| Mva1269I | GAATGC | 3 cut(s) | 908, 1161, 1173 |
| MvaI | CCWGG | 3 cut(s) | 184, 748, 1101 |
| MvnI | CGCG | 1 cut(s) | 562 |
| NciI | CCSGG | 2 cut(s) | 610, 966 |
| NcoI | CCATGG | 1 cut(s) | 331 |
| NdeII | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| NlaIII | CATG | 3 cut(s) | 335, 355, 1036 |
| NlaIV | GGNNCC | 2 cut(s) | 590, 1098 |
| NmeAIII | GCCGAG | 2 cut(s) | 229, 765 |
| NsiI | ATGCAT | 1 cut(s) | 1173 |
| NspI | RCATGY | 1 cut(s) | 1036 |
| NspV | TTCGAA | 1 cut(s) | 1165 |
| PaqCI | CACCTGC | 1 cut(s) | 648 |
| PciI | ACATGT | 1 cut(s) | 1032 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1171 |
| PctI | GAATGC | 3 cut(s) | 908, 1161, 1173 |
| PdmI | GAANNNNTTC | 1 cut(s) | 587 |
| PfeI | GAWTC | 2 cut(s) | 388, 759 |
| Ple19I | CGATCG | 1 cut(s) | 1178 |
| PleI | GAGTC | 2 cut(s) | 170, 214 |
| PpsI | GAGTC | 2 cut(s) | 170, 214 |
| PscI | ACATGT | 1 cut(s) | 1032 |
| PshAI | GACNNNNGTC | 1 cut(s) | 542 |
| Psp6I | CCWGG | 3 cut(s) | 182, 746, 1099 |
| PspFI | CCCAGC | 1 cut(s) | 34 |
| PspGI | CCWGG | 3 cut(s) | 182, 746, 1099 |
| PspN4I | GGNNCC | 2 cut(s) | 590, 1098 |
| PspPI | GGNCC | 1 cut(s) | 1103 |
| PstI | CTGCAG | 1 cut(s) | 1160 |
| PstNI | CAGNNNCTG | 3 cut(s) | 245, 263, 1155 |
| PsuI | RGATCY | 3 cut(s) | 191, 743, 1067 |
| PvuI | CGATCG | 1 cut(s) | 1178 |
| RsaI | GTAC | 1 cut(s) | 887 |
| RsaNI | GTAC | 1 cut(s) | 886 |
| RseI | CAYNNNNRTG | 2 cut(s) | 336, 1166 |
| SalI | GTCGAC | 1 cut(s) | 62 |
| SaqAI | TTAA | 4 cut(s) | 138, 450, 1053, 1125 |
| Sau3AI | GATC | 6 cut(s) | 191, 348, 743, 778, 1067, 1175 |
| Sau96I | GGNCC | 1 cut(s) | 1103 |
| SchI | GAGTC | 2 cut(s) | 170, 215 |
| ScrFI | CCNGG | 5 cut(s) | 184, 610, 748, 966, 1101 |
| SduI | GDGCHC | 2 cut(s) | 436, 535 |
| SfaNI | GCATC | 4 cut(s) | 259, 625, 1161, 1180 |
| SfcI | CTRYAG | 1 cut(s) | 1156 |
| SfuI | TTCGAA | 1 cut(s) | 1165 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 336, 1166 |
| SmlI | CTYRAG | 1 cut(s) | 870 |
| SmoI | CTYRAG | 1 cut(s) | 870 |
| Sse9I | AATT | 5 cut(s) | 157, 234, 647, 714, 723 |
| StyD4I | CCNGG | 5 cut(s) | 182, 608, 746, 964, 1099 |
| StyI | CCWWGG | 1 cut(s) | 331 |
| TaaI | ACNGT | 6 cut(s) | 79, 397, 431, 512, 544, 936 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 4 cut(s) | 63, 914, 1165, 1174 |
| TasI | AATT | 5 cut(s) | 157, 234, 647, 714, 723 |
| TauI | GCSGC | 7 cut(s) | 251, 263, 275, 284, 287, 296, 330 |
| TfiI | GAWTC | 2 cut(s) | 388, 759 |
| Tru1I | TTAA | 4 cut(s) | 138, 450, 1053, 1125 |
| Tru9I | TTAA | 4 cut(s) | 138, 450, 1053, 1125 |
| TscAI | CASTG | 1 cut(s) | 246 |
| TseI | GCWGC | 9 cut(s) | 245, 257, 263, 377, 494, 497, 820, 1139, 1158 |
| TspDTI | ATGAA | 5 cut(s) | 56, 398, 693, 717, 915 |
| TspRI | CASTG | 1 cut(s) | 246 |
| XapI | RAATTY | 2 cut(s) | 157, 647 |
| XceI | RCATGY | 1 cut(s) | 1036 |
| XmiI | GTMKAC | 1 cut(s) | 63 |
| XmnI | GAANNNNTTC | 1 cut(s) | 587 |
| Zsp2I | ATGCAT | 1 cut(s) | 1173 |