Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002379

Physical Location & Seq

Genomic Coordinates Reverse (-)

46304940 .. 46308135

Gene Structure 3196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0365100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGACCTCTCTCCAGCTCCTAAACACCCCAGTTTTCGCGGGAAAACGGAGCCCCCGCATATGGACCACTGGGGTGACGCCACGTGGGTGTCTTAACGTGGATCAAAACGTGCCGGCGGCGGTGGGGAGCCAGGAGGTGATGGAGGCGGAGAAGAGGGTTATGGTGGGGACGTACAATAGACCACCGGTGGTGATCGCCAGTGGCAAAGGATGTAAATTGTACGATCCTGAAGGGCGAGAGTATTTGGACTTGATGTCTGGGATTGCTGTCAATGCGCTTGGACATGGGGATCCGGATTGGATACGGGCCGTTACAGAGCAAGCCCATGTGCTCACCCATGTCAGCAATGTCTACTATTCCATTCCCCAGGTGGAGCTGGCAAAACGGCTGGTGGCTTGCTCCTTTGCTGACCGTGTCTTTTTCTCAAACTCCGGAACTGAAGCAAATGAAGCTGCCATAAAATTTGCAAGAAAGTTCCAAAGATTTTCAAACCCTGAGAAGAAAGAGCCTGCAACAGAATTCATTTCTTTCACTAACAGCTTCCATGGGAGGACGATGGGGTCCGTGGCTTTGACTAGTAAAGAGCATTACCGATCACCATTTGAGCCTCTCATGCCTGGAGTCACTTTCTTAGATTATGGAAATGTACAAGCTGCAAGAAAGCTAATTAAATCTGGCAAAATCGCTGCTGTGTTTGTTGAACCTATCCAGGGTGAAGGTGGGATAAATAGTGCAACTAAAGAATTTTTGCAATCCTTGCGTGGTGCTTGTGATGATTCAGGTTCTCTTCTGGTCTTTGATGAGGTTCAATGTGGGTTGGGTCGAACTGGTTATCTCTGGGCGCATGAAGCTTATGGTGTATTCCCAGATATAATGACTCTGGCCAAGCCTCTTGCAGGAGGACTTCCCATAGGAGCTGTATTAGTGACTGAAAAGGTTGCTGCTTCAATGAAGTATGGAGAACATGGAAGCACTTTTGCTGGGGGCCCCCTTATCTGCAATGCTGCCCTTGCAGTCTTGGACAAAATTTCCAAGCCTGAGTTTCTCAGAAGCGTCTCAGAGAAAGGTCAGTACTTCAAAGAAGTGCTGACAAAGAAGCTGGGCACAAATCCACATGTGAGAGAAGTACGGGGTTTGGGGCTCATTGTTGGAGTAGAGCTGGACGTATCTGCTTCACCGCTTGTGGATGCCTGTAGGAATTCTGGTCTTCTGATAATAACAGCTGGAAAAGGAAATGTCCTCAGACTTGTGCCGCCGTTGATCATCTCTAAGCCAGAATTGGAGCATGCAGCTGAGATTTTGCTTGAATGTTTGCCTGCCCTTCATGGCTCTACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005875 GO:0005886 GO:0015630 GO:0016020 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

445

Amino Acids

47.91

Weight (kDa)

8.04

Isoelectric Point (pI)

31.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	60 - 438	5.7e-116	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16490
fragaria_vesca	FvH4_1g06300 FvH4_6g32490 FvH4_6g32490 FvH4_6g32490
malus_domestica	MD02G1066900.v1.1 MD09G1201900.v1.1 MD15G1197400.v1.1 MD17G1182000.v1.1
prunus_persica	Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.7G218500_v2.0.a1 Prupe.7G218500_v2.0.a1
pyrus_communis	pycom02g05290 pycom09g11870 pycom17g19160
rosa_chinensis	RchiOBHm_Chr2g0092031 RchiOBHm_Chr2g0140781
rosa_laevigata	RLG00000016269 RLG00000019897
rosa_multiflora	Rmu_sc0000524.1_g000003 Rmu_sc0003342.1_g000033
rosa_roxburghii	Rroxscaffold_2G00104500 Rroxscaffold_2G00149540
rosa_rugosa	Rorug02G0022400 Rorug02G0022400 Rorug02G0365100 Rorug02G0365200
rosa_samantha	Rh2AG068000 Rh2AG416500 Rh2BG067400 Rh2BG426000 Rh2CG068700 Rh2CG402700 Rh2DG067000 Rh2DG436000
rosa_wichuraiana	Rw2G005310 Rw2G034070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	559
AccI	GTMKAC	1 cut(s)	351
AccII	CGCG	1 cut(s)	38
AccIII	TCCGGA	2 cut(s)	292, 431
AciI	CCGC	7 cut(s)	38, 55, 116, 119, 146, 1178, 1253
AclWI	GGATC	4 cut(s)	108, 218, 284, 297
AcoI	YGGCCR	1 cut(s)	882
AcsI	RAATTY	5 cut(s)	461, 518, 743, 1026, 1198
AcuI	CTGAAG	2 cut(s)	249, 459
AcvI	CACGTG	1 cut(s)	83
AcyI	GRCGYC	1 cut(s)	77
AfaI	GTAC	5 cut(s)	173, 221, 648, 1073, 1128
AfiI	CCNNNNNNNGG	3 cut(s)	60, 710, 896
AflIII	ACRYGT	1 cut(s)	1114
AgeI	ACCGGT	1 cut(s)	184
AgsI	TTSAA	6 cut(s)	489, 701, 809, 948, 1078, 1307
AhdI	GACNNNNNGTC	1 cut(s)	253
AhlI	ACTAGT	1 cut(s)	575
AjnI	CCWGG	4 cut(s)	129, 366, 616, 708
AleI	CACNNNNGTG	2 cut(s)	71, 85
Alw21I	GWGCWC	1 cut(s)	333
Alw26I	GTCTC	1 cut(s)	1060
AlwI	GGATC	4 cut(s)	108, 218, 284, 297
Aor13HI	TCCGGA	2 cut(s)	292, 431
AoxI	GGCC	3 cut(s)	306, 882, 985
ApaI	GGGCCC	1 cut(s)	989
ApeKI	GCWGC	6 cut(s)	452, 653, 686, 941, 1004, 1289
ApoI	RAATTY	5 cut(s)	461, 518, 743, 1026, 1198
AsiGI	ACCGGT	1 cut(s)	184
AspLEI	GCGC	2 cut(s)	277, 844
AspS9I	GGNCC	5 cut(s)	63, 306, 561, 985, 986
AsuHPI	GGTGA	7 cut(s)	85, 148, 202, 325, 588, 725, 1167
AvaII	GGWCC	2 cut(s)	63, 561
BaeGI	GKGCMC	2 cut(s)	989, 1106
BalI	TGGCCA	1 cut(s)	884
BamHI	GGATCC	1 cut(s)	289
BanII	GRGCYC	3 cut(s)	53, 989, 1143
BbrPI	CACGTG	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	1199
Bbv12I	GWGCWC	1 cut(s)	333
BbvI	GCAGC	6 cut(s)	439, 640, 673, 928, 991, 1301
BccI	CCATC	2 cut(s)	133, 550
BceAI	ACGGC	3 cut(s)	293, 401, 1240
BciT130I	CCWGG	4 cut(s)	131, 368, 618, 710
BciVI	GTATCC	1 cut(s)	294
BclI	TGATCA	1 cut(s)	1260
BcoDI	GTCTC	1 cut(s)	1060
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	1 cut(s)	576
BfmI	CTRYAG	1 cut(s)	1192
BfuI	GTATCC	1 cut(s)	294
BisI	GCNGC	8 cut(s)	117, 453, 654, 687, 942, 1005, 1253, 1290
BlsI	GCNGC	8 cut(s)	118, 454, 655, 688, 943, 1006, 1254, 1291
BmcAI	AGTACT	1 cut(s)	1073
Bme1390I	CCNGG	4 cut(s)	131, 368, 618, 710
Bme18I	GGWCC	2 cut(s)	63, 561
BmeRI	GACNNNNNGTC	1 cut(s)	253
BmgT120I	GGNCC	5 cut(s)	63, 306, 561, 985, 986
BmiI	GGNNCC	7 cut(s)	50, 128, 291, 562, 986, 987, 988
BmrFI	CCNGG	4 cut(s)	131, 368, 618, 710
BmrI	ACTGGG	2 cut(s)	23, 78
BmsI	GCATC	1 cut(s)	1177
BmuI	ACTGGG	2 cut(s)	23, 78
BpiI	GAAGAC	1 cut(s)	1199
BpmI	CTGGAG	1 cut(s)	639
BsaAI	YACGTR	1 cut(s)	83
BsaHI	GRCGYC	1 cut(s)	77
BsaJI	CCNNGG	4 cut(s)	366, 544, 564, 709
BsaWI	WCCGGW	3 cut(s)	184, 292, 431
Bsc4I	CCNNNNNNNGG	3 cut(s)	60, 710, 896
Bse118I	RCCGGY	2 cut(s)	112, 184
Bse1I	ACTGG	4 cut(s)	29, 73, 198, 832
Bse3DI	GCAATG	2 cut(s)	352, 1006
BseAI	TCCGGA	2 cut(s)	292, 431
BseBI	CCWGG	4 cut(s)	131, 368, 618, 710
BseDI	CCNNGG	4 cut(s)	366, 544, 564, 709
BseGI	GGATG	2 cut(s)	215, 1192
BseLI	CCNNNNNNNGG	3 cut(s)	60, 710, 896
BseMI	GCAATG	2 cut(s)	352, 1006
BseMII	CTCAG	6 cut(s)	486, 1029, 1060, 1071, 1255, 1284
BseNI	ACTGG	4 cut(s)	29, 73, 198, 832
BseSI	GKGCMC	2 cut(s)	989, 1106
BseXI	GCAGC	6 cut(s)	439, 640, 673, 928, 991, 1301
BseYI	CCCAGC	2 cut(s)	980, 1099
Bsh1236I	CGCG	1 cut(s)	38
BshFI	GGCC	3 cut(s)	308, 884, 987
BshTI	ACCGGT	1 cut(s)	184
BsiHKAI	GWGCWC	1 cut(s)	333
BsiSI	CCGG	4 cut(s)	113, 185, 293, 432
BslFI	GGGAC	1 cut(s)	181
BslI	CCNNNNNNNGG	3 cut(s)	60, 710, 896
BsmAI	GTCTC	1 cut(s)	1060
BsmBI	CGTCTC	1 cut(s)	1060
BsmFI	GGGAC	1 cut(s)	181
BsnI	GGCC	3 cut(s)	308, 884, 987
Bsp120I	GGGCCC	1 cut(s)	985
Bsp1286I	GDGCHC	5 cut(s)	53, 333, 989, 1106, 1143
Bsp13I	TCCGGA	2 cut(s)	292, 431
Bsp1407I	TGTACA	1 cut(s)	646
Bsp143I	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
Bsp19I	CCATGG	1 cut(s)	544
BspACI	CCGC	7 cut(s)	38, 55, 116, 119, 146, 1178, 1253
BspANI	GGCC	3 cut(s)	308, 884, 987
BspCNI	CTCAG	6 cut(s)	487, 1030, 1059, 1070, 1254, 1285
BspEI	TCCGGA	2 cut(s)	292, 431
BspFNI	CGCG	1 cut(s)	38
BspLI	GGNNCC	7 cut(s)	50, 128, 291, 562, 986, 987, 988
BspPI	GGATC	4 cut(s)	108, 218, 284, 297
BsrDI	GCAATG	2 cut(s)	352, 1006
BsrFI	RCCGGY	2 cut(s)	112, 184
BsrGI	TGTACA	1 cut(s)	646
BsrI	ACTGG	4 cut(s)	29, 73, 198, 832
BssAI	RCCGGY	2 cut(s)	112, 184
BssECI	CCNNGG	4 cut(s)	366, 544, 564, 709
BssMI	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
BssNI	GRCGYC	1 cut(s)	77
BssT1I	CCWWGG	1 cut(s)	544
Bst2UI	CCWGG	4 cut(s)	131, 368, 618, 710
Bst4CI	ACNGT	1 cut(s)	413
Bst6I	CTCTTC	2 cut(s)	146, 792
BstACI	GRCGYC	1 cut(s)	77
BstAPI	GCANNNNNTGC	1 cut(s)	757
BstAUI	TGTACA	1 cut(s)	646
BstBAI	YACGTR	1 cut(s)	83
BstC8I	GCNNGC	7 cut(s)	114, 321, 378, 397, 510, 1287, 1317
BstDEI	CTNAG	8 cut(s)	495, 631, 1038, 1046, 1057, 1241, 1269, 1293
BstDSI	CCRYGG	2 cut(s)	544, 564
BstENI	CCTNNNNNAGG	1 cut(s)	894
BstF5I	GGATG	2 cut(s)	215, 1192
BstFNI	CGCG	1 cut(s)	38
BstHHI	GCGC	2 cut(s)	277, 844
BstKTI	GATC	6 cut(s)	103, 195, 226, 292, 596, 1263
BstMAI	GTCTC	1 cut(s)	1060
BstMBI	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
BstMWI	GCNNNNNNNGC	6 cut(s)	272, 449, 613, 757, 848, 1010
BstNI	CCWGG	4 cut(s)	131, 368, 618, 710
BstNSI	RCATGY	2 cut(s)	1118, 1289
BstSCI	CCNGG	4 cut(s)	129, 366, 616, 708
BstSFI	CTRYAG	1 cut(s)	1192
BstSLI	GKGCMC	2 cut(s)	989, 1106
BstUI	CGCG	1 cut(s)	38
BstV1I	GCAGC	6 cut(s)	439, 640, 673, 928, 991, 1301
BstV2I	GAAGAC	1 cut(s)	1199
BstX2I	RGATCY	1 cut(s)	289
BstYI	RGATCY	1 cut(s)	289
BsuI	GTATCC	1 cut(s)	294
BsuRI	GGCC	3 cut(s)	308, 884, 987
BtgI	CCRYGG	2 cut(s)	544, 564
BtsCI	GGATG	2 cut(s)	215, 1192
BtsIMutI	CAGTG	2 cut(s)	66, 205
Cac8I	GCNNGC	7 cut(s)	114, 321, 378, 397, 510, 1287, 1317
CfoI	GCGC	2 cut(s)	277, 844
Cfr10I	RCCGGY	2 cut(s)	112, 184
Cfr13I	GGNCC	5 cut(s)	63, 306, 561, 985, 986
CseI	GACGC	2 cut(s)	85, 1042
Csp6I	GTAC	5 cut(s)	172, 220, 647, 1072, 1127
CspAI	ACCGGT	1 cut(s)	184
CviQI	GTAC	5 cut(s)	172, 220, 647, 1072, 1127
DdeI	CTNAG	8 cut(s)	495, 631, 1038, 1046, 1057, 1241, 1269, 1293
DpnI	GATC	6 cut(s)	102, 194, 225, 291, 595, 1262
DpnII	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
DrdI	GACNNNNNNGTC	1 cut(s)	559
DriI	GACNNNNNGTC	1 cut(s)	253
DseDI	GACNNNNNNGTC	1 cut(s)	559
EaeI	YGGCCR	1 cut(s)	882
Eam1104I	CTCTTC	2 cut(s)	146, 792
Eam1105I	GACNNNNNGTC	1 cut(s)	253
EarI	CTCTTC	2 cut(s)	146, 792
EciI	GGCGGA	1 cut(s)	161
Eco130I	CCWWGG	1 cut(s)	544
Eco24I	GRGCYC	3 cut(s)	53, 989, 1143
Eco47I	GGWCC	2 cut(s)	63, 561
Eco57I	CTGAAG	2 cut(s)	249, 459
Eco72I	CACGTG	1 cut(s)	83
EcoNI	CCTNNNNNAGG	1 cut(s)	894
EcoO109I	RGGNCCY	2 cut(s)	985, 986
EcoRI	GAATTC	2 cut(s)	518, 1198
EcoRII	CCWGG	4 cut(s)	129, 366, 616, 708
EcoT14I	CCWWGG	1 cut(s)	544
EcoT38I	GRGCYC	3 cut(s)	53, 989, 1143
ErhI	CCWWGG	1 cut(s)	544
Esp3I	CGTCTC	1 cut(s)	1060
FaqI	GGGAC	1 cut(s)	181
FauI	CCCGC	2 cut(s)	31, 62
FauNDI	CATATG	1 cut(s)	59
FbaI	TGATCA	1 cut(s)	1260
FblI	GTMKAC	1 cut(s)	351
Fnu4HI	GCNGC	8 cut(s)	117, 453, 654, 687, 942, 1005, 1253, 1290
FokI	GGATG	2 cut(s)	222, 1199
FriOI	GRGCYC	3 cut(s)	53, 989, 1143
Fsp4HI	GCNGC	8 cut(s)	117, 453, 654, 687, 942, 1005, 1253, 1290
FspBI	CTAG	1 cut(s)	576
GlaI	GCGC	2 cut(s)	276, 843
GluI	GCNGC	8 cut(s)	117, 453, 654, 687, 942, 1005, 1253, 1290
GsaI	CCCAGC	2 cut(s)	984, 1103
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	3 cut(s)	308, 884, 987
HapII	CCGG	4 cut(s)	113, 185, 293, 432
HgaI	GACGC	2 cut(s)	85, 1042
HhaI	GCGC	2 cut(s)	277, 844
Hin1I	GRCGYC	1 cut(s)	77
Hin6I	GCGC	2 cut(s)	275, 842
HinP1I	GCGC	2 cut(s)	275, 842
HindIII	AAGCTT	1 cut(s)	849
HinfI	GANTC	3 cut(s)	621, 776, 877
HpaII	CCGG	4 cut(s)	113, 185, 293, 432
HphI	GGTGA	7 cut(s)	85, 148, 202, 325, 588, 725, 1167
Hpy166II	GTNNAC	1 cut(s)	352
Hpy188I	TCNGA	4 cut(s)	1049, 1060, 1212, 1244
Hpy188III	TCNNGA	3 cut(s)	227, 293, 432
Hpy8I	GTNNAC	1 cut(s)	352
HpyAV	CCTTC	3 cut(s)	224, 710, 1331
HpyCH4III	ACNGT	1 cut(s)	413
HpyCH4IV	ACGT	5 cut(s)	82, 96, 108, 170, 1164
HpyCH4V	TGCA	9 cut(s)	467, 512, 656, 734, 751, 896, 999, 1013, 1289
HpyF10VI	GCNNNNNNNGC	6 cut(s)	272, 449, 613, 757, 848, 1010
HpyF3I	CTNAG	8 cut(s)	495, 631, 1038, 1046, 1057, 1241, 1269, 1293
HpySE526I	ACGT	5 cut(s)	82, 96, 108, 170, 1164
Hsp92I	GRCGYC	1 cut(s)	77
HspAI	GCGC	2 cut(s)	275, 842
Kpn2I	TCCGGA	2 cut(s)	292, 431
KroI	GCCGGC	1 cut(s)	112
KroNI	GCCGGC	1 cut(s)	114
Ksp22I	TGATCA	1 cut(s)	1260
Kzo9I	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
LmnI	GCTCC	7 cut(s)	21, 48, 126, 373, 404, 914, 1282
Lsp1109I	GCAGC	6 cut(s)	439, 640, 673, 928, 991, 1301
LweI	GCATC	1 cut(s)	1177
MaeI	CTAG	1 cut(s)	576
MaeII	ACGT	5 cut(s)	82, 96, 108, 170, 1164
MaeIII	GTNAC	4 cut(s)	73, 310, 622, 925
MalI	GATC	6 cut(s)	102, 194, 225, 291, 595, 1262
MboI	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
MboII	GAAGA	4 cut(s)	163, 511, 779, 1199
MflI	RGATCY	1 cut(s)	289
MhlI	GDGCHC	5 cut(s)	53, 333, 989, 1106, 1143
MlsI	TGGCCA	1 cut(s)	884
MluCI	AATT	8 cut(s)	215, 461, 518, 666, 743, 1026, 1198, 1277
MluNI	TGGCCA	1 cut(s)	884
MlyI	GAGTC	2 cut(s)	630, 871
MmeI	TCCRAC	1 cut(s)	1129
Mox20I	TGGCCA	1 cut(s)	884
MroI	TCCGGA	2 cut(s)	292, 431
MroNI	GCCGGC	1 cut(s)	112
MscI	TGGCCA	1 cut(s)	884
MseI	TTAA	2 cut(s)	93, 669
MslI	CAYNNNNRTG	2 cut(s)	71, 85
Msp20I	TGGCCA	1 cut(s)	884
MspA1I	CMGCKG	2 cut(s)	1223, 1292
MspI	CCGG	4 cut(s)	113, 185, 293, 432
MspR9I	CCNGG	4 cut(s)	131, 368, 618, 710
MvaI	CCWGG	4 cut(s)	131, 368, 618, 710
MvnI	CGCG	1 cut(s)	38
MwoI	GCNNNNNNNGC	6 cut(s)	272, 449, 613, 757, 848, 1010
NaeI	GCCGGC	1 cut(s)	114
NcoI	CCATGG	1 cut(s)	544
NdeI	CATATG	1 cut(s)	59
NdeII	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
NgoMIV	GCCGGC	1 cut(s)	112
NlaIV	GGNNCC	7 cut(s)	50, 128, 291, 562, 986, 987, 988
NmuCI	GTSAC	3 cut(s)	73, 622, 925
NspI	RCATGY	2 cut(s)	1118, 1289
OliI	CACNNNNGTG	2 cut(s)	71, 85
PaeI	GCATGC	1 cut(s)	1289
PciI	ACATGT	1 cut(s)	1114
PdiI	GCCGGC	1 cut(s)	114
PfeI	GAWTC	1 cut(s)	776
PflFI	GACNNNGTC	1 cut(s)	413
PinAI	ACCGGT	1 cut(s)	184
PkrI	GCNGC	8 cut(s)	118, 454, 655, 688, 943, 1006, 1254, 1291
PleI	GAGTC	2 cut(s)	629, 871
PmaCI	CACGTG	1 cut(s)	83
PmlI	CACGTG	1 cut(s)	83
PpsI	GAGTC	2 cut(s)	629, 871
Ppu21I	YACGTR	1 cut(s)	83
PscI	ACATGT	1 cut(s)	1114
Psp6I	CCWGG	4 cut(s)	129, 366, 616, 708
PspCI	CACGTG	1 cut(s)	83
PspFI	CCCAGC	2 cut(s)	980, 1099
PspGI	CCWGG	4 cut(s)	129, 366, 616, 708
PspN4I	GGNNCC	7 cut(s)	50, 128, 291, 562, 986, 987, 988
PspOMI	GGGCCC	1 cut(s)	985
PspPI	GGNCC	5 cut(s)	63, 306, 561, 985, 986
PsuI	RGATCY	1 cut(s)	289
PsyI	GACNNNGTC	1 cut(s)	413
PvuII	CAGCTG	2 cut(s)	1223, 1292
RsaI	GTAC	5 cut(s)	173, 221, 648, 1073, 1128
RsaNI	GTAC	5 cut(s)	172, 220, 647, 1072, 1127
RseI	CAYNNNNRTG	2 cut(s)	71, 85
SaqAI	TTAA	2 cut(s)	93, 669
SatI	GCNGC	8 cut(s)	117, 453, 654, 687, 942, 1005, 1253, 1290
Sau3AI	GATC	6 cut(s)	100, 192, 223, 289, 593, 1260
Sau96I	GGNCC	5 cut(s)	63, 306, 561, 985, 986
ScaI	AGTACT	1 cut(s)	1073
SchI	GAGTC	2 cut(s)	630, 871
ScrFI	CCNGG	4 cut(s)	131, 368, 618, 710
SduI	GDGCHC	5 cut(s)	53, 333, 989, 1106, 1143
SfaNI	GCATC	1 cut(s)	1177
SfcI	CTRYAG	1 cut(s)	1192
SgrAI	CRCCGGYG	1 cut(s)	184
SinI	GGWCC	2 cut(s)	63, 561
SmiMI	CAYNNNNRTG	2 cut(s)	71, 85
SpeI	ACTAGT	1 cut(s)	575
SphI	GCATGC	1 cut(s)	1289
Sse9I	AATT	8 cut(s)	215, 461, 518, 666, 743, 1026, 1198, 1277
SsiI	CCGC	7 cut(s)	38, 55, 116, 119, 146, 1178, 1253
SspMI	CTAG	1 cut(s)	576
StyD4I	CCNGG	4 cut(s)	129, 366, 616, 708
StyI	CCWWGG	1 cut(s)	544
TaaI	ACNGT	1 cut(s)	413
TaiI	ACGT	5 cut(s)	85, 99, 111, 173, 1167
TaqI	TCGA	1 cut(s)	823
TasI	AATT	8 cut(s)	215, 461, 518, 666, 743, 1026, 1198, 1277
TatI	WGTACW	2 cut(s)	646, 1071
TauI	GCSGC	2 cut(s)	119, 1255
TfiI	GAWTC	1 cut(s)	776
Tru1I	TTAA	2 cut(s)	93, 669
Tru9I	TTAA	2 cut(s)	93, 669
TscAI	CASTG	2 cut(s)	73, 205
TseFI	GTSAC	3 cut(s)	73, 622, 925
TseI	GCWGC	6 cut(s)	452, 653, 686, 941, 1004, 1289
Tsp45I	GTSAC	3 cut(s)	73, 622, 925
TspDTI	ATGAA	5 cut(s)	462, 511, 861, 965, 1313
TspGWI	ACGGA	2 cut(s)	61, 553
TspRI	CASTG	2 cut(s)	73, 205
Tth111I	GACNNNGTC	1 cut(s)	413
VpaK11BI	GGWCC	2 cut(s)	63, 561
XagI	CCTNNNNNAGG	1 cut(s)	894
XapI	RAATTY	5 cut(s)	461, 518, 743, 1026, 1198
XceI	RCATGY	2 cut(s)	1118, 1289
XcmI	CCANNNNNNNNNTGG	2 cut(s)	367, 716
XmiI	GTMKAC	1 cut(s)	351
XspI	CTAG	1 cut(s)	576
ZrmI	AGTACT	1 cut(s)	1073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.