Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002379

Physical Location & Seq

Genomic Coordinates Forward (+)

1799767 .. 1805750

Gene Structure 5984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0022400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGAAGGGTTTTAGAGATTGGATTCTTTCTCAGTTAGTATCCAAGTCTGTGGTATCGTCTCGGCCGTTATCAGGCAGTGATAGTTTCTTTAGTGTGGAACGTTCGACTAATGAAGTGATTACTGACCAAGGTGCTTCTGATTCTACCACTTTGGTAGCACCGCCCGTCCTTGATGAAACTTCCAACTCGTTGAATAGGGATCAGGAAAATCAGTCTAGTCCTTCCCCGCAGGATGTTGAGGTTGAAAATTCTGATCAATCTCGTAGTGGGTCTGATATGAGAAAGAAGGATCCTTTGGTGAAAATTGATGATCTGCAAGCCAAGTTCTTGCAACTCCTCCGGCGGCTTGGTCTATCAAAAGACAACCTCATGGTGGCAAAGGTTCTTTATCGAATTCACCTAGCAACCGTGATACGAGCAGAAAAGTCGGATTTGAAAGGAGTTAATCTCGGAGGTGATGGAAAAAGAGTGATGACAGCAGAACAAGCTGGCCCGCCTGATTTGGATTTTTCTCTGAGAATCCTTGTCCTTGGGAAAACAGGAGTGGGCAAGAGTGCTACAATTAATTCTATATTTGATCAAACAAAAGCAGTAACCAATGCTTTTCGACCCGGTACAAAGCACATTCGGGAGGTTGTGGGAACTGTAAATGGGATTAGAGTAACTGTCATTGATACCCCTGGTTTTTTGCCTGGGGTATGTACAGGTAACTTGCGCAGAAATAAGAAGATTATGCTCTCAGTGAAGAGATTTATTAGAAAAAGTCCACCTGACATTGTTTTGTTTTTCGAACGCCTTGATCTCATTGATACAAGCTATAGTGATCTTCCCCTTTTGAAGCTAATAACTGAAGTTTTTGGGCGTGCAATTTGGTTTAGCACCATTCTTGTTATGACTCATTCTTCCTCAGCTCTTCCGGATGGACCAGACGGGTACCCTGTCAGCTATGAAGTACATGCGAGGCGAAGCACAGATATGGTGCAGCACTATATACATCAGGCAGTGTCGGACTCCAGACTTGAAAACCCAGTGCTTTTGGTTGAGAATCATTCTCATTGCAAGACAAATATCATGGGGGAAAAGATACTTCCAAATGGTCAGGTTTGGAAATCTCAGTTTTTGTTACTATGCATTTGTACAAAAGTTCTAGGTGATGTTAATTCCCTCTTGAAATTTAACGACAGCATTGAACTGGGGCCCCCAGCTGCTACCTATGTGCCGTCTCTACCCCATCTCCTTTCATCTCTTCTACGCCATCCTATTGTTCCAAGTGGAGTGCAAAATGAAGTTGATGAGAGCTTGTTTTCAGACATGGAGGAAGAAGATGAGTATGATCAATTACCTGCAATCCGAATCCTGACAAAAGCCCAGTTTGAGAGGCTGACAAAATCACAGAAAACAGACTATCTCAATGAATTGGATTATCGGGAGACCCTTTATCTGAAGAAACAGTTGAAAGAAGAGTACCTTAGGCAGATGGAAAGTATGCTTTCCAATGAAAAAAATTCAGCAAGTGATGATAACTCTGAGAGTCAGCAGGCCGCCCCAGAGGAGGCTGTTTTATTACCAGATATGGAGATCCCTCTGAGTTTTGGCTCTAATCACCCTGCACACAGATATCGTTGCCTTGTTGCGAGTGATCAGTGGATTGTGAGACCTGTTCTTGATCCCCAGGGATGGGATAATGATGTGGGCTTCGATGGAATAAGCTTGGAATCAGCTGCACATATAAATAGGGAACTCTTTACCTCTGTTATGGGGCAGATAAGCAAGGACAAACAAGATTTTAGCATTCAGTCAGAGTGCGCTGCAGCTTACACAAATTCCAGGGGAACTGTACATTCTGTAGGTCTTGATGTTCAATCTGCCGGTAAAGATACCATCTATACTTTTCACAGCAACAAGAAGCGAGCAAATCAGAAGAAGCTGTGGGAGGATGTTTTTGATGGTGGAGTCTCTTTGACATCTTTTGGGAACAAGTATTACTTTGGTGCCAAGCTTGAAGAAACTGTTTCAATTGGGAAGAGGTTGAAGTTTCTGATGAATGCAGGCCAAATGATGAATGCAAGCAAATTGATTGTGGATCGTGAACAAGTGGCATATGGTGGCTCTGTGGAAGCTACTTTACGGGGTAGAGACTACCCTGTGAGAAATGACTTTGTCACCCTGACAATGTCTATCCTTTCTTTCAATAAAGAGATGGTGTTGGGTGGAAACGTACGGTCTGAGTCCCGGCTGGGCAGAAATTTGAAGGTATCGGTCAATGCTAATCTAAATAGCCGCAGGATGGGGAAGTTGAGCATAAAGACAAGCAGCAGTGATCATTTTCCGTTTGGTCTGGTTGCCGCTTTCACAATTTTCTGGACCCTCTTATGGAGAAAGGGCATAGCAAATTCAAGTAATGAATCAGGGGAGACTGAAGTAGGGGAGACTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005875 GO:0005886 GO:0015630 GO:0016020 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

812

Amino Acids

90.31

Weight (kDa)

6.39

Isoelectric Point (pI)

42.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AIG1	PF04548	172 - 305	8.3e-19	AIG1 family
MMR_HSR1	PF01926	173 - 262	5.7e-09	50S ribosome-binding GTPase
TOC159_MAD	PF11886	518 - 791	8.3e-101	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16490
fragaria_vesca	FvH4_1g06300 FvH4_6g32490 FvH4_6g32490 FvH4_6g32490
malus_domestica	MD02G1066900.v1.1 MD09G1201900.v1.1 MD15G1197400.v1.1 MD17G1182000.v1.1
prunus_persica	Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.3G057500_v2.0.a1 Prupe.7G218500_v2.0.a1 Prupe.7G218500_v2.0.a1
pyrus_communis	pycom02g05290 pycom09g11870 pycom17g19160
rosa_chinensis	RchiOBHm_Chr2g0092031 RchiOBHm_Chr2g0140781
rosa_laevigata	RLG00000016269 RLG00000019897
rosa_multiflora	Rmu_sc0000524.1_g000003 Rmu_sc0003342.1_g000033
rosa_roxburghii	Rroxscaffold_2G00104500 Rroxscaffold_2G00149540
rosa_rugosa	Rorug02G0022400 Rorug02G0022400 Rorug02G0365100 Rorug02G0365200
rosa_samantha	Rh2AG068000 Rh2AG416500 Rh2BG067400 Rh2BG426000 Rh2CG068700 Rh2CG402700 Rh2DG067000 Rh2DG436000
rosa_wichuraiana	Rw2G005310 Rw2G034070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	716
Acc36I	ACCTGC	1 cut(s)	1351
Acc65I	GGTACC	1 cut(s)	933
AccB1I	GGYRCC	2 cut(s)	933, 1991
AccIII	TCCGGA	1 cut(s)	916
AciI	CCGC	7 cut(s)	161, 227, 343, 494, 1542, 2281, 2346
AclI	AACGTT	1 cut(s)	100
AclWI	GGATC	6 cut(s)	207, 284, 297, 1573, 1661, 2091
AcoI	YGGCCR	1 cut(s)	62
AcsI	RAATTY	7 cut(s)	247, 393, 1172, 1504, 1822, 2245, 2392
AcuI	CTGAAG	3 cut(s)	870, 1463, 2439
AfaI	GTAC	8 cut(s)	616, 703, 935, 954, 1138, 1466, 1839, 2220
AfiI	CCNNNNNNNGG	7 cut(s)	71, 373, 1552, 1677, 1678, 2287, 2373
AjnI	CCWGG	4 cut(s)	679, 691, 1671, 1826
AjuI	GAANNNNNNNTTGG	2 cut(s)	278, 310
Alw26I	GTCTC	8 cut(s)	63, 1227, 1424, 1648, 1960, 2130, 2408, 2423
AlwI	GGATC	6 cut(s)	207, 284, 297, 1573, 1661, 2091
Aor13HI	TCCGGA	1 cut(s)	916
AoxI	GGCC	5 cut(s)	62, 490, 1196, 1539, 2050
ApaI	GGGCCC	1 cut(s)	1200
ApeKI	GCWGC	6 cut(s)	982, 1205, 1721, 1808, 1811, 2313
ApoI	RAATTY	7 cut(s)	247, 393, 1172, 1504, 1822, 2245, 2392
AseI	ATTAAT	1 cut(s)	564
Asp718I	GGTACC	1 cut(s)	933
AspLEI	GCGC	2 cut(s)	717, 1808
AspS9I	GGNCC	5 cut(s)	491, 923, 1196, 1197, 2364
AsuC2I	CCSGG	2 cut(s)	612, 2233
AsuHPI	GGTGA	6 cut(s)	310, 389, 467, 1163, 1595, 2155
AsuII	TTCGAA	1 cut(s)	789
AvaII	GGWCC	2 cut(s)	923, 2364
AxyI	CCTNAGG	1 cut(s)	1469
BaeGI	GKGCMC	1 cut(s)	1200
BamHI	GGATCC	1 cut(s)	289
BanI	GGYRCC	2 cut(s)	933, 1991
BanII	GRGCYC	1 cut(s)	1200
BarI	GAAGNNNNNNTAC	2 cut(s)	2109, 2141
BbvCI	CCTCAGC	1 cut(s)	907
BbvI	GCAGC	6 cut(s)	994, 1192, 1708, 1795, 1823, 2325
BceAI	ACGGC	2 cut(s)	49, 1204
BcgI	CGANNNNNNTGC	2 cut(s)	408, 442
BciT130I	CCWGG	4 cut(s)	681, 693, 1673, 1828
BciVI	GTATCC	1 cut(s)	49
BclI	TGATCA	5 cut(s)	253, 577, 1333, 1639, 2320
BcnI	CCSGG	2 cut(s)	612, 2233
BcoDI	GTCTC	8 cut(s)	63, 1227, 1424, 1648, 1960, 2130, 2408, 2423
BfaI	CTAG	3 cut(s)	216, 401, 1148
BfmI	CTRYAG	3 cut(s)	817, 1809, 1845
BfuAI	ACCTGC	1 cut(s)	1351
BfuI	GTATCC	1 cut(s)	49
Bme1390I	CCNGG	6 cut(s)	612, 681, 693, 1673, 1828, 2233
Bme18I	GGWCC	2 cut(s)	923, 2364
BmgT120I	GGNCC	5 cut(s)	491, 923, 1196, 1197, 2364
BmiI	GGNNCC	7 cut(s)	291, 935, 1197, 1198, 1199, 1993, 2366
BmrFI	CCNGG	6 cut(s)	612, 681, 693, 1673, 1828, 2233
BmrI	ACTGGG	3 cut(s)	1022, 1202, 1363
BmuI	ACTGGG	3 cut(s)	1022, 1202, 1363
BplI	GAGNNNNNCTC	2 cut(s)	432, 464
BpmI	CTGGAG	1 cut(s)	997
Bpu10I	CCTNAGC	1 cut(s)	907
Bpu14I	TTCGAA	1 cut(s)	789
BpuMI	CCSGG	2 cut(s)	612, 2233
BsaI	GGTCTC	2 cut(s)	1424, 1648
BsaJI	CCNNGG	7 cut(s)	127, 529, 679, 692, 1671, 1672, 1827
BsaWI	WCCGGW	1 cut(s)	916
BsaXI	ACNNNNNCTCC	2 cut(s)	1218, 1248
Bsc4I	CCNNNNNNNGG	7 cut(s)	71, 373, 1552, 1677, 1678, 2287, 2373
Bse118I	RCCGGY	1 cut(s)	1868
Bse1I	ACTGG	4 cut(s)	1028, 1197, 1369, 2437
Bse21I	CCTNAGG	1 cut(s)	1469
Bse3DI	GCAATG	1 cut(s)	1054
BseAI	TCCGGA	1 cut(s)	916
BseBI	CCWGG	4 cut(s)	681, 693, 1673, 1828
BseDI	CCNNGG	7 cut(s)	127, 529, 679, 692, 1671, 1672, 1827
BseGI	GGATG	6 cut(s)	238, 925, 1255, 1682, 1942, 2292
BseLI	CCNNNNNNNGG	7 cut(s)	71, 373, 1552, 1677, 1678, 2287, 2373
BseMI	GCAATG	1 cut(s)	1054
BseMII	CTCAG	8 cut(s)	44, 506, 753, 921, 1127, 1518, 1577, 2217
BseNI	ACTGG	4 cut(s)	1028, 1197, 1369, 2437
BseRI	GAGGAG	2 cut(s)	326, 1565
BseSI	GKGCMC	1 cut(s)	1200
BseX3I	CGGCCG	1 cut(s)	62
BseXI	GCAGC	6 cut(s)	994, 1192, 1708, 1795, 1823, 2325
BseYI	CCCAGC	2 cut(s)	1201, 2236
BsgI	GTGCAG	3 cut(s)	1001, 1593, 1707
Bsh1285I	CGRYCG	1 cut(s)	65
BshFI	GGCC	5 cut(s)	64, 492, 1198, 1541, 2052
BshNI	GGYRCC	2 cut(s)	933, 1991
BsiEI	CGRYCG	1 cut(s)	65
BsiSI	CCGG	5 cut(s)	340, 612, 917, 1869, 2233
BsiWI	CGTACG	1 cut(s)	2218
BslFI	GGGAC	1 cut(s)	2215
BslI	CCNNNNNNNGG	7 cut(s)	71, 373, 1552, 1677, 1678, 2287, 2373
BsmAI	GTCTC	8 cut(s)	63, 1227, 1424, 1648, 1960, 2130, 2408, 2423
BsmBI	CGTCTC	2 cut(s)	63, 1227
BsmFI	GGGAC	1 cut(s)	2215
BsmI	GAATGC	3 cut(s)	1791, 2050, 2068
BsnI	GGCC	5 cut(s)	64, 492, 1198, 1541, 2052
Bso31I	GGTCTC	2 cut(s)	1424, 1648
Bsp119I	TTCGAA	1 cut(s)	789
Bsp120I	GGGCCC	1 cut(s)	1196
Bsp1286I	GDGCHC	1 cut(s)	1200
Bsp13I	TCCGGA	1 cut(s)	916
Bsp1407I	TGTACA	3 cut(s)	701, 1136, 1837
BspACI	CCGC	7 cut(s)	161, 227, 343, 494, 1542, 2281, 2346
BspANI	GGCC	5 cut(s)	64, 492, 1198, 1541, 2052
BspCNI	CTCAG	8 cut(s)	43, 507, 752, 920, 1126, 1519, 1578, 2218
BspEI	TCCGGA	1 cut(s)	916
BspLI	GGNNCC	7 cut(s)	291, 935, 1197, 1198, 1199, 1993, 2366
BspMAI	CTGCAG	1 cut(s)	1813
BspMI	ACCTGC	1 cut(s)	1351
BspPI	GGATC	6 cut(s)	207, 284, 297, 1573, 1661, 2091
BspQI	GCTCTTC	1 cut(s)	918
BspT104I	TTCGAA	1 cut(s)	789
BspT107I	GGYRCC	2 cut(s)	933, 1991
BspTNI	GGTCTC	2 cut(s)	1424, 1648
BsrDI	GCAATG	1 cut(s)	1054
BsrFI	RCCGGY	1 cut(s)	1868
BsrGI	TGTACA	3 cut(s)	701, 1136, 1837
BsrI	ACTGG	4 cut(s)	1028, 1197, 1369, 2437
BssAI	RCCGGY	1 cut(s)	1868
BssECI	CCNNGG	7 cut(s)	127, 529, 679, 692, 1671, 1672, 1827
BssT1I	CCWWGG	2 cut(s)	127, 529
Bst2UI	CCWGG	4 cut(s)	681, 693, 1673, 1828
Bst4CI	ACNGT	7 cut(s)	409, 646, 667, 1452, 1837, 2011, 2223
Bst6I	CTCTTC	5 cut(s)	740, 918, 1251, 1455, 2018
BstAUI	TGTACA	3 cut(s)	701, 1136, 1837
BstBI	TTCGAA	1 cut(s)	789
BstC8I	GCNNGC	8 cut(s)	318, 490, 494, 864, 1539, 1911, 2050, 2068
BstDEI	CTNAG	9 cut(s)	30, 515, 739, 907, 1113, 1469, 1527, 1586, 2226
BstF5I	GGATG	6 cut(s)	238, 925, 1255, 1682, 1942, 2292
BstHHI	GCGC	2 cut(s)	717, 1808
BstMAI	GTCTC	8 cut(s)	63, 1227, 1424, 1648, 1960, 2130, 2408, 2423
BstMCI	CGRYCG	1 cut(s)	65
BstMWI	GCNNNNNNNGC	1 cut(s)	485
BstNI	CCWGG	4 cut(s)	681, 693, 1673, 1828
BstNSI	RCATGY	1 cut(s)	959
BstSCI	CCNGG	6 cut(s)	610, 679, 691, 1671, 1826, 2231
BstSFI	CTRYAG	3 cut(s)	817, 1809, 1845
BstSLI	GKGCMC	1 cut(s)	1200
BstV1I	GCAGC	6 cut(s)	994, 1192, 1708, 1795, 1823, 2325
BstX2I	RGATCY	2 cut(s)	289, 1578
BstXI	CCANNNNNNTGG	1 cut(s)	49
BstYI	RGATCY	2 cut(s)	289, 1578
BstZI	CGGCCG	1 cut(s)	62
Bsu36I	CCTNAGG	1 cut(s)	1469
BsuI	GTATCC	1 cut(s)	49
BsuRI	GGCC	5 cut(s)	64, 492, 1198, 1541, 2052
BtsCI	GGATG	6 cut(s)	238, 925, 1255, 1682, 1942, 2292
BtsI	GCAGTG	3 cut(s)	82, 1008, 2323
BtsIMutI	CAGTG	6 cut(s)	82, 747, 1008, 1035, 1649, 2323
BveI	ACCTGC	1 cut(s)	1351
Cac8I	GCNNGC	8 cut(s)	318, 490, 494, 864, 1539, 1911, 2050, 2068
CfoI	GCGC	2 cut(s)	717, 1808
Cfr10I	RCCGGY	1 cut(s)	1868
Cfr13I	GGNCC	5 cut(s)	491, 923, 1196, 1197, 2364
Csp6I	GTAC	8 cut(s)	615, 702, 934, 953, 1137, 1465, 1838, 2219
CviAII	CATG	4 cut(s)	370, 956, 1072, 1312
CviQI	GTAC	8 cut(s)	615, 702, 934, 953, 1137, 1465, 1838, 2219
DdeI	CTNAG	9 cut(s)	30, 515, 739, 907, 1113, 1469, 1527, 1586, 2226
EaeI	YGGCCR	1 cut(s)	62
EagI	CGGCCG	1 cut(s)	62
Eam1104I	CTCTTC	5 cut(s)	740, 918, 1251, 1455, 2018
EarI	CTCTTC	5 cut(s)	740, 918, 1251, 1455, 2018
EclXI	CGGCCG	1 cut(s)	62
Eco130I	CCWWGG	2 cut(s)	127, 529
Eco24I	GRGCYC	1 cut(s)	1200
Eco31I	GGTCTC	2 cut(s)	1424, 1648
Eco32I	GATATC	1 cut(s)	1619
Eco47I	GGWCC	2 cut(s)	923, 2364
Eco52I	CGGCCG	1 cut(s)	62
Eco57I	CTGAAG	3 cut(s)	870, 1463, 2439
Eco81I	CCTNAGG	1 cut(s)	1469
EcoO109I	RGGNCCY	2 cut(s)	1196, 1197
EcoRI	GAATTC	1 cut(s)	393
EcoRII	CCWGG	4 cut(s)	679, 691, 1671, 1826
EcoRV	GATATC	1 cut(s)	1619
EcoT14I	CCWWGG	2 cut(s)	127, 529
EcoT22I	ATGCAT	1 cut(s)	1133
EcoT38I	GRGCYC	1 cut(s)	1200
ErhI	CCWWGG	2 cut(s)	127, 529
Esp3I	CGTCTC	2 cut(s)	63, 1227
FaeI	CATG	4 cut(s)	373, 959, 1075, 1315
FalI	AAGNNNNNCTT	4 cut(s)	1452, 1484, 1970, 2002
FaqI	GGGAC	1 cut(s)	2215
FatI	CATG	4 cut(s)	369, 955, 1071, 1311
FauI	CCCGC	2 cut(s)	234, 501
FauNDI	CATATG	1 cut(s)	2101
FbaI	TGATCA	5 cut(s)	253, 577, 1333, 1639, 2320
FokI	GGATG	6 cut(s)	245, 932, 1242, 1689, 1949, 2299
FriOI	GRGCYC	1 cut(s)	1200
FspBI	CTAG	3 cut(s)	216, 401, 1148
FspI	TGCGCA	1 cut(s)	716
GlaI	GCGC	2 cut(s)	716, 1807
GsaI	CCCAGC	2 cut(s)	1205, 2240
GsuI	CTGGAG	1 cut(s)	997
HaeIII	GGCC	5 cut(s)	64, 492, 1198, 1541, 2052
HapII	CCGG	5 cut(s)	340, 612, 917, 1869, 2233
HhaI	GCGC	2 cut(s)	717, 1808
Hin1II	CATG	4 cut(s)	373, 959, 1075, 1315
Hin6I	GCGC	2 cut(s)	715, 1806
HinP1I	GCGC	2 cut(s)	715, 1806
HindIII	AAGCTT	2 cut(s)	1708, 1997
HpaII	CCGG	5 cut(s)	340, 612, 917, 1869, 2233
HphI	GGTGA	6 cut(s)	310, 389, 467, 1163, 1595, 2155
Hpy166II	GTNNAC	2 cut(s)	767, 2090
Hpy8I	GTNNAC	2 cut(s)	767, 2090
HpyAV	CCTTC	3 cut(s)	231, 280, 2245
HpyCH4III	ACNGT	7 cut(s)	409, 646, 667, 1452, 1837, 2011, 2223
HpyCH4IV	ACGT	2 cut(s)	100, 2217
HpyF10VI	GCNNNNNNNGC	1 cut(s)	485
HpyF3I	CTNAG	9 cut(s)	30, 515, 739, 907, 1113, 1469, 1527, 1586, 2226
HpySE526I	ACGT	2 cut(s)	100, 2217
Hsp92II	CATG	4 cut(s)	373, 959, 1075, 1315
HspAI	GCGC	2 cut(s)	715, 1806
Kpn2I	TCCGGA	1 cut(s)	916
KpnI	GGTACC	1 cut(s)	937
Ksp22I	TGATCA	5 cut(s)	253, 577, 1333, 1639, 2320
LguI	GCTCTTC	1 cut(s)	918
Lsp1109I	GCAGC	6 cut(s)	994, 1192, 1708, 1795, 1823, 2325
MaeI	CTAG	3 cut(s)	216, 401, 1148
MaeII	ACGT	2 cut(s)	100, 2217
MaeIII	GTNAC	5 cut(s)	592, 661, 707, 1122, 2161
MfeI	CAATTG	1 cut(s)	2016
MflI	RGATCY	2 cut(s)	289, 1578
MhlI	GDGCHC	1 cut(s)	1200
MlyI	GAGTC	5 cut(s)	889, 1004, 1540, 1962, 2237
MmeI	TCCRAC	3 cut(s)	207, 408, 987
Mph1103I	ATGCAT	1 cut(s)	1133
MroI	TCCGGA	1 cut(s)	916
MseI	TTAA	4 cut(s)	444, 564, 1158, 1176
MslI	CAYNNNNRTG	1 cut(s)	974
MspA1I	CMGCKG	2 cut(s)	1205, 1721
MspI	CCGG	5 cut(s)	340, 612, 917, 1869, 2233
MspR9I	CCNGG	6 cut(s)	612, 681, 693, 1673, 1828, 2233
MunI	CAATTG	1 cut(s)	2016
Mva1269I	GAATGC	3 cut(s)	1791, 2050, 2068
MvaI	CCWGG	4 cut(s)	681, 693, 1673, 1828
MwoI	GCNNNNNNNGC	1 cut(s)	485
NciI	CCSGG	2 cut(s)	612, 2233
NdeI	CATATG	1 cut(s)	2101
NlaIII	CATG	4 cut(s)	373, 959, 1075, 1315
NlaIV	GGNNCC	7 cut(s)	291, 935, 1197, 1198, 1199, 1993, 2366
NmeAIII	GCCGAG	1 cut(s)	40
NmuCI	GTSAC	1 cut(s)	2161
NsbI	TGCGCA	1 cut(s)	716
NsiI	ATGCAT	1 cut(s)	1133
NspI	RCATGY	1 cut(s)	959
NspV	TTCGAA	1 cut(s)	789
PasI	CCCWGGG	1 cut(s)	1672
PciSI	GCTCTTC	1 cut(s)	918
PcsI	WCGNNNNNNNCGW	1 cut(s)	62
PctI	GAATGC	3 cut(s)	1791, 2050, 2068
PfeI	GAWTC	7 cut(s)	22, 140, 519, 1045, 1353, 1715, 2405
Pfl23II	CGTACG	1 cut(s)	2218
PflFI	GACNNNGTC	2 cut(s)	2159, 2173
PleI	GAGTC	5 cut(s)	889, 1004, 1539, 1961, 2236
PpsI	GAGTC	5 cut(s)	889, 1004, 1539, 1961, 2236
PshBI	ATTAAT	1 cut(s)	564
Psp1406I	AACGTT	1 cut(s)	100
Psp6I	CCWGG	4 cut(s)	679, 691, 1671, 1826
PspFI	CCCAGC	2 cut(s)	1201, 2236
PspGI	CCWGG	4 cut(s)	679, 691, 1671, 1826
PspLI	CGTACG	1 cut(s)	2218
PspN4I	GGNNCC	7 cut(s)	291, 935, 1197, 1198, 1199, 1993, 2366
PspOMI	GGGCCC	1 cut(s)	1196
PspPI	GGNCC	5 cut(s)	491, 923, 1196, 1197, 2364
PsrI	GAACNNNNNNTAC	2 cut(s)	1967, 1999
PstI	CTGCAG	1 cut(s)	1813
PsuI	RGATCY	2 cut(s)	289, 1578
PsyI	GACNNNGTC	2 cut(s)	2159, 2173
PvuII	CAGCTG	2 cut(s)	1205, 1721
RsaI	GTAC	8 cut(s)	616, 703, 935, 954, 1138, 1466, 1839, 2220
RsaNI	GTAC	8 cut(s)	615, 702, 934, 953, 1137, 1465, 1838, 2219
RseI	CAYNNNNRTG	1 cut(s)	974
SapI	GCTCTTC	1 cut(s)	918
SaqAI	TTAA	4 cut(s)	444, 564, 1158, 1176
Sau96I	GGNCC	5 cut(s)	491, 923, 1196, 1197, 2364
SchI	GAGTC	5 cut(s)	889, 1004, 1540, 1962, 2237
ScrFI	CCNGG	6 cut(s)	612, 681, 693, 1673, 1828, 2233
SduI	GDGCHC	1 cut(s)	1200
SfcI	CTRYAG	3 cut(s)	817, 1809, 1845
SfuI	TTCGAA	1 cut(s)	789
SinI	GGWCC	2 cut(s)	923, 2364
SmiMI	CAYNNNNRTG	1 cut(s)	974
SsiI	CCGC	7 cut(s)	161, 227, 343, 494, 1542, 2281, 2346
SspMI	CTAG	3 cut(s)	216, 401, 1148
StyD4I	CCNGG	6 cut(s)	610, 679, 691, 1671, 1826, 2231
StyI	CCWWGG	2 cut(s)	127, 529
TaaI	ACNGT	7 cut(s)	409, 646, 667, 1452, 1837, 2011, 2223
TaiI	ACGT	2 cut(s)	103, 2220
TaqI	TCGA	5 cut(s)	104, 391, 607, 789, 1698
TaqII	GACCGA	1 cut(s)	2248
TatI	WGTACW	4 cut(s)	701, 952, 1136, 1837
TauI	GCSGC	4 cut(s)	346, 1544, 2283, 2348
TfiI	GAWTC	7 cut(s)	22, 140, 519, 1045, 1353, 1715, 2405
Tru1I	TTAA	4 cut(s)	444, 564, 1158, 1176
Tru9I	TTAA	4 cut(s)	444, 564, 1158, 1176
TscAI	CASTG	6 cut(s)	82, 747, 1008, 1035, 1649, 2323
TseFI	GTSAC	1 cut(s)	2161
TseI	GCWGC	6 cut(s)	982, 1205, 1721, 1808, 1811, 2313
Tsp45I	GTSAC	1 cut(s)	2161
TspGWI	ACGGA	1 cut(s)	2319
TspRI	CASTG	6 cut(s)	82, 747, 1008, 1035, 1649, 2323
Tth111I	GACNNNGTC	2 cut(s)	2159, 2173
VpaK11BI	GGWCC	2 cut(s)	923, 2364
VspI	ATTAAT	1 cut(s)	564
XapI	RAATTY	7 cut(s)	247, 393, 1172, 1504, 1822, 2245, 2392
XceI	RCATGY	1 cut(s)	959
XspI	CTAG	3 cut(s)	216, 401, 1148
Zsp2I	ATGCAT	1 cut(s)	1133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.