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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G10950 AT2G10950 AT2G10950 |
| fragaria_vesca | FvH4_1g02550 |
| malus_domestica | MD02G1023000.v1.1 MD15G1165700.v1.1 |
| prunus_persica | Prupe.7G249100_v2.0.a1 Prupe.7G249100_v2.0.a1 Prupe.7G249100_v2.0.a1 Prupe.7G249100_v2.0.a1 Prupe.7G249100_v2.0.a1 |
| pyrus_communis | pycom02g01980 pycom02g01990 pycom15g14850 |
| rosa_chinensis | RchiOBHm_Chr2g0087581 |
| rosa_laevigata | RLG00000014236 RLG00000015880 |
| rosa_multiflora | Rmu_sc0000129.1_g000013 Rmu_sc0000146.1_g000024 Rmu_sc0001000.1_g000015 Rmu_sc0002299.1_g000025 Rmu_sc0007639.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00153450 Rroxscaffold_6G00397290 |
| rosa_rugosa | Rorug01G0476700 |
| rosa_samantha | Rh2AG030300 Rh2AG030400 Rh2BG030100 Rh2CG030400 Rh2DG030300 Rh4CG011200 Rh4CG011800 Rh4CG012200 Rh4CG012600 Rh4DG394600 Rh5AG455300 |
| rosa_wichuraiana | Rw2G002400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1086 |
| AccBSI | CCGCTC | 1 cut(s) | 300 |
| AccII | CGCG | 2 cut(s) | 81, 132 |
| AciI | CCGC | 8 cut(s) | 79, 130, 132, 212, 218, 285, 300, 770 |
| AclWI | GGATC | 2 cut(s) | 29, 1114 |
| AcoI | YGGCCR | 3 cut(s) | 106, 973, 1153 |
| AcsI | RAATTY | 1 cut(s) | 474 |
| AcuI | CTGAAG | 3 cut(s) | 362, 957, 1014 |
| AcyI | GRCGYC | 3 cut(s) | 135, 186, 1083 |
| AfaI | GTAC | 1 cut(s) | 84 |
| AfeI | AGCGCT | 1 cut(s) | 249 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 438, 1162 |
| AgsI | TTSAA | 4 cut(s) | 295, 572, 749, 1206 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1082 |
| AjnI | CCWGG | 2 cut(s) | 583, 816 |
| AleI | CACNNNNGTG | 1 cut(s) | 965 |
| AluBI | AGCT | 9 cut(s) | 144, 291, 376, 389, 694, 745, 777, 866, 1126 |
| AluI | AGCT | 9 cut(s) | 144, 291, 376, 389, 694, 745, 777, 866, 1126 |
| Alw21I | GWGCWC | 1 cut(s) | 923 |
| Alw26I | GTCTC | 3 cut(s) | 308, 664, 1074 |
| AlwI | GGATC | 2 cut(s) | 29, 1114 |
| Aor51HI | AGCGCT | 1 cut(s) | 249 |
| AoxI | GGCC | 4 cut(s) | 106, 973, 1063, 1153 |
| ApeKI | GCWGC | 4 cut(s) | 214, 288, 373, 484 |
| ApoI | RAATTY | 1 cut(s) | 474 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 80, 103, 112, 135, 1153, 1185 |
| AspLEI | GCGC | 1 cut(s) | 250 |
| AspS9I | GGNCC | 1 cut(s) | 498 |
| AsuC2I | CCSGG | 1 cut(s) | 438 |
| AsuHPI | GGTGA | 5 cut(s) | 165, 460, 792, 1089, 1208 |
| AsuII | TTCGAA | 1 cut(s) | 362 |
| AvaII | GGWCC | 1 cut(s) | 498 |
| AxyI | CCTNAGG | 1 cut(s) | 1067 |
| BalI | TGGCCA | 2 cut(s) | 975, 1155 |
| BbsI | GAAGAC | 1 cut(s) | 402 |
| Bbv12I | GWGCWC | 1 cut(s) | 923 |
| BbvI | GCAGC | 4 cut(s) | 226, 300, 385, 471 |
| BccI | CCATC | 2 cut(s) | 965, 1220 |
| BceAI | ACGGC | 3 cut(s) | 173, 205, 320 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 352, 386 |
| BciT130I | CCWGG | 2 cut(s) | 585, 818 |
| BcnI | CCSGG | 1 cut(s) | 438 |
| BcoDI | GTCTC | 3 cut(s) | 308, 664, 1074 |
| BfaI | CTAG | 2 cut(s) | 1044, 1053 |
| BfmI | CTRYAG | 1 cut(s) | 1221 |
| BfoI | RGCGCY | 1 cut(s) | 251 |
| BglII | AGATCT | 1 cut(s) | 345 |
| BisI | GCNGC | 7 cut(s) | 133, 215, 218, 286, 289, 374, 485 |
| BlsI | GCNGC | 7 cut(s) | 134, 216, 219, 287, 290, 375, 486 |
| Bme1390I | CCNGG | 3 cut(s) | 438, 585, 818 |
| Bme18I | GGWCC | 1 cut(s) | 498 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1082 |
| BmgT120I | GGNCC | 1 cut(s) | 498 |
| BmiI | GGNNCC | 2 cut(s) | 11, 582 |
| BmrFI | CCNGG | 3 cut(s) | 438, 585, 818 |
| BmrI | ACTGGG | 1 cut(s) | 1126 |
| BmsI | GCATC | 1 cut(s) | 532 |
| BmuI | ACTGGG | 1 cut(s) | 1126 |
| BpiI | GAAGAC | 1 cut(s) | 402 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 989, 1021 |
| Bpu14I | TTCGAA | 1 cut(s) | 362 |
| BpuEI | CTTGAG | 1 cut(s) | 837 |
| BpuMI | CCSGG | 1 cut(s) | 438 |
| Bsa29I | ATCGAT | 1 cut(s) | 906 |
| BsaHI | GRCGYC | 3 cut(s) | 135, 186, 1083 |
| BsaI | GGTCTC | 1 cut(s) | 308 |
| BsaJI | CCNNGG | 4 cut(s) | 13, 115, 130, 437 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 438, 1162 |
| Bse1I | ACTGG | 4 cut(s) | 72, 515, 1121, 1217 |
| Bse21I | CCTNAGG | 1 cut(s) | 1067 |
| BseBI | CCWGG | 2 cut(s) | 585, 818 |
| BseCI | ATCGAT | 1 cut(s) | 906 |
| BseDI | CCNNGG | 4 cut(s) | 13, 115, 130, 437 |
| BseGI | GGATG | 3 cut(s) | 648, 813, 976 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 438, 1162 |
| BseMII | CTCAG | 5 cut(s) | 333, 560, 864, 915, 1131 |
| BseNI | ACTGG | 4 cut(s) | 72, 515, 1121, 1217 |
| BseRI | GAGGAG | 1 cut(s) | 187 |
| BseXI | GCAGC | 4 cut(s) | 226, 300, 385, 471 |
| BsgI | GTGCAG | 1 cut(s) | 722 |
| Bsh1236I | CGCG | 2 cut(s) | 81, 132 |
| Bsh1285I | CGRYCG | 1 cut(s) | 121 |
| BshFI | GGCC | 4 cut(s) | 108, 975, 1065, 1155 |
| BshVI | ATCGAT | 1 cut(s) | 906 |
| BsiEI | CGRYCG | 1 cut(s) | 121 |
| BsiHKAI | GWGCWC | 1 cut(s) | 923 |
| BsiSI | CCGG | 1 cut(s) | 437 |
| BslFI | GGGAC | 1 cut(s) | 163 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 438, 1162 |
| BsmAI | GTCTC | 3 cut(s) | 308, 664, 1074 |
| BsmBI | CGTCTC | 1 cut(s) | 1074 |
| BsmFI | GGGAC | 1 cut(s) | 163 |
| BsnI | GGCC | 4 cut(s) | 108, 975, 1065, 1155 |
| Bso31I | GGTCTC | 1 cut(s) | 308 |
| Bsp119I | TTCGAA | 1 cut(s) | 362 |
| Bsp1286I | GDGCHC | 1 cut(s) | 923 |
| Bsp143I | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| BspACI | CCGC | 8 cut(s) | 79, 130, 132, 212, 218, 285, 300, 770 |
| BspANI | GGCC | 4 cut(s) | 108, 975, 1065, 1155 |
| BspCNI | CTCAG | 5 cut(s) | 334, 559, 865, 916, 1132 |
| BspDI | ATCGAT | 1 cut(s) | 906 |
| BspFNI | CGCG | 2 cut(s) | 81, 132 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspLI | GGNNCC | 2 cut(s) | 11, 582 |
| BspPI | GGATC | 2 cut(s) | 29, 1114 |
| BspT104I | TTCGAA | 1 cut(s) | 362 |
| BspTNI | GGTCTC | 1 cut(s) | 308 |
| BsrBI | CCGCTC | 1 cut(s) | 300 |
| BsrI | ACTGG | 4 cut(s) | 72, 515, 1121, 1217 |
| BssECI | CCNNGG | 4 cut(s) | 13, 115, 130, 437 |
| BssMI | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| BssNI | GRCGYC | 3 cut(s) | 135, 186, 1083 |
| Bst2UI | CCWGG | 2 cut(s) | 585, 818 |
| Bst4CI | ACNGT | 4 cut(s) | 177, 428, 568, 1222 |
| Bst6I | CTCTTC | 3 cut(s) | 909, 933, 990 |
| BstACI | GRCGYC | 3 cut(s) | 135, 186, 1083 |
| BstBI | TTCGAA | 1 cut(s) | 362 |
| BstC8I | GCNNGC | 3 cut(s) | 142, 246, 1157 |
| BstDEI | CTNAG | 7 cut(s) | 342, 546, 599, 873, 924, 1067, 1140 |
| BstDSI | CCRYGG | 1 cut(s) | 130 |
| BstF5I | GGATG | 3 cut(s) | 648, 813, 976 |
| BstFNI | CGCG | 2 cut(s) | 81, 132 |
| BstH2I | RGCGCY | 1 cut(s) | 251 |
| BstHHI | GCGC | 1 cut(s) | 250 |
| BstKTI | GATC | 8 cut(s) | 37, 271, 282, 348, 523, 648, 906, 1109 |
| BstMAI | GTCTC | 3 cut(s) | 308, 664, 1074 |
| BstMBI | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| BstMCI | CGRYCG | 1 cut(s) | 121 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 129, 141, 223, 297 |
| BstNI | CCWGG | 2 cut(s) | 585, 818 |
| BstNSI | RCATGY | 3 cut(s) | 538, 560, 1095 |
| BstSCI | CCNGG | 3 cut(s) | 436, 583, 816 |
| BstSFI | CTRYAG | 1 cut(s) | 1221 |
| BstUI | CGCG | 2 cut(s) | 81, 132 |
| BstV1I | GCAGC | 4 cut(s) | 226, 300, 385, 471 |
| BstV2I | GAAGAC | 1 cut(s) | 402 |
| BstX2I | RGATCY | 1 cut(s) | 345 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 495 |
| BstYI | RGATCY | 1 cut(s) | 345 |
| Bsu15I | ATCGAT | 1 cut(s) | 906 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1067 |
| BsuRI | GGCC | 4 cut(s) | 108, 975, 1065, 1155 |
| BsuTUI | ATCGAT | 1 cut(s) | 906 |
| BtgI | CCRYGG | 1 cut(s) | 130 |
| BtsCI | GGATG | 3 cut(s) | 648, 813, 976 |
| BtsI | GCAGTG | 1 cut(s) | 935 |
| BtsIMutI | CAGTG | 4 cut(s) | 339, 564, 921, 935 |
| Cac8I | GCNNGC | 3 cut(s) | 142, 246, 1157 |
| CciI | TCATGA | 1 cut(s) | 523 |
| CfoI | GCGC | 1 cut(s) | 250 |
| Cfr13I | GGNCC | 1 cut(s) | 498 |
| Cfr42I | CCGCGG | 1 cut(s) | 133 |
| ClaI | ATCGAT | 1 cut(s) | 906 |
| CseI | GACGC | 3 cut(s) | 124, 194, 728 |
| Csp6I | GTAC | 1 cut(s) | 83 |
| CviAII | CATG | 7 cut(s) | 41, 524, 535, 557, 622, 986, 1092 |
| CviQI | GTAC | 1 cut(s) | 83 |
| DdeI | CTNAG | 7 cut(s) | 342, 546, 599, 873, 924, 1067, 1140 |
| DpnI | GATC | 8 cut(s) | 36, 270, 281, 347, 522, 647, 905, 1108 |
| DpnII | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1082 |
| EaeI | YGGCCR | 3 cut(s) | 106, 973, 1153 |
| Eam1104I | CTCTTC | 3 cut(s) | 909, 933, 990 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1082 |
| EarI | CTCTTC | 3 cut(s) | 909, 933, 990 |
| EciI | GGCGGA | 1 cut(s) | 785 |
| Eco147I | AGGCCT | 1 cut(s) | 1065 |
| Eco31I | GGTCTC | 1 cut(s) | 308 |
| Eco32I | GATATC | 1 cut(s) | 1003 |
| Eco47I | GGWCC | 1 cut(s) | 498 |
| Eco47III | AGCGCT | 1 cut(s) | 249 |
| Eco57I | CTGAAG | 3 cut(s) | 362, 957, 1014 |
| Eco81I | CCTNAGG | 1 cut(s) | 1067 |
| EcoRII | CCWGG | 2 cut(s) | 583, 816 |
| EcoRV | GATATC | 1 cut(s) | 1003 |
| Esp3I | CGTCTC | 1 cut(s) | 1074 |
| FaeI | CATG | 7 cut(s) | 44, 527, 538, 560, 625, 989, 1095 |
| FaiI | YATR | 8 cut(s) | 42, 512, 525, 536, 558, 623, 987, 1093 |
| FaqI | GGGAC | 1 cut(s) | 163 |
| FatI | CATG | 7 cut(s) | 40, 523, 534, 556, 621, 985, 1091 |
| FauI | CCCGC | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 7 cut(s) | 133, 215, 218, 286, 289, 374, 485 |
| FokI | GGATG | 3 cut(s) | 655, 800, 983 |
| Fsp4HI | GCNGC | 7 cut(s) | 133, 215, 218, 286, 289, 374, 485 |
| FspBI | CTAG | 2 cut(s) | 1044, 1053 |
| GlaI | GCGC | 1 cut(s) | 249 |
| GluI | GCNGC | 7 cut(s) | 133, 215, 218, 286, 289, 374, 485 |
| HaeII | RGCGCY | 1 cut(s) | 251 |
| HaeIII | GGCC | 4 cut(s) | 108, 975, 1065, 1155 |
| HapII | CCGG | 1 cut(s) | 437 |
| HgaI | GACGC | 3 cut(s) | 124, 194, 728 |
| HhaI | GCGC | 1 cut(s) | 250 |
| Hin1I | GRCGYC | 3 cut(s) | 135, 186, 1083 |
| Hin1II | CATG | 7 cut(s) | 44, 527, 538, 560, 625, 989, 1095 |
| Hin6I | GCGC | 1 cut(s) | 248 |
| HinP1I | GCGC | 1 cut(s) | 248 |
| HincII | GTYRAC | 1 cut(s) | 718 |
| HindII | GTYRAC | 1 cut(s) | 718 |
| HindIII | AAGCTT | 2 cut(s) | 743, 864 |
| HinfI | GANTC | 5 cut(s) | 64, 258, 797, 1187, 1202 |
| HpaII | CCGG | 1 cut(s) | 437 |
| HphI | GGTGA | 5 cut(s) | 165, 460, 792, 1089, 1208 |
| Hpy166II | GTNNAC | 2 cut(s) | 718, 1097 |
| Hpy188I | TCNGA | 8 cut(s) | 263, 381, 541, 549, 669, 937, 1141, 1192 |
| Hpy188III | TCNNGA | 5 cut(s) | 295, 392, 524, 794, 854 |
| Hpy8I | GTNNAC | 2 cut(s) | 718, 1097 |
| Hpy99I | CGWCG | 5 cut(s) | 140, 188, 226, 452, 455 |
| HpyAV | CCTTC | 3 cut(s) | 78, 888, 1187 |
| HpyCH4III | ACNGT | 4 cut(s) | 177, 428, 568, 1222 |
| HpyCH4IV | ACGT | 2 cut(s) | 453, 1083 |
| HpyCH4V | TGCA | 3 cut(s) | 373, 593, 739 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 129, 141, 223, 297 |
| HpyF3I | CTNAG | 7 cut(s) | 342, 546, 599, 873, 924, 1067, 1140 |
| HpySE526I | ACGT | 2 cut(s) | 453, 1083 |
| Hsp92I | GRCGYC | 3 cut(s) | 135, 186, 1083 |
| Hsp92II | CATG | 7 cut(s) | 44, 527, 538, 560, 625, 989, 1095 |
| HspAI | GCGC | 1 cut(s) | 248 |
| KspI | CCGCGG | 1 cut(s) | 133 |
| Kzo9I | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| LmnI | GCTCC | 1 cut(s) | 15 |
| Lsp1109I | GCAGC | 4 cut(s) | 226, 300, 385, 471 |
| LweI | GCATC | 1 cut(s) | 532 |
| MaeI | CTAG | 2 cut(s) | 1044, 1053 |
| MaeII | ACGT | 2 cut(s) | 453, 1083 |
| MaeIII | GTNAC | 3 cut(s) | 326, 337, 466 |
| MalI | GATC | 8 cut(s) | 36, 270, 281, 347, 522, 647, 905, 1108 |
| MbiI | CCGCTC | 1 cut(s) | 300 |
| MboI | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| MboII | GAAGA | 4 cut(s) | 407, 926, 950, 1007 |
| MflI | RGATCY | 1 cut(s) | 345 |
| MhlI | GDGCHC | 1 cut(s) | 923 |
| MlsI | TGGCCA | 2 cut(s) | 975, 1155 |
| MluCI | AATT | 3 cut(s) | 202, 474, 789 |
| MluNI | TGGCCA | 2 cut(s) | 975, 1155 |
| MlyI | GAGTC | 1 cut(s) | 73 |
| MmeI | TCCRAC | 2 cut(s) | 49, 802 |
| Mox20I | TGGCCA | 2 cut(s) | 975, 1155 |
| MscI | TGGCCA | 2 cut(s) | 975, 1155 |
| MseI | TTAA | 2 cut(s) | 882, 899 |
| MslI | CAYNNNNRTG | 1 cut(s) | 965 |
| Msp20I | TGGCCA | 2 cut(s) | 975, 1155 |
| MspA1I | CMGCKG | 3 cut(s) | 132, 285, 1126 |
| MspI | CCGG | 1 cut(s) | 437 |
| MspR9I | CCNGG | 3 cut(s) | 438, 585, 818 |
| MvaI | CCWGG | 2 cut(s) | 585, 818 |
| MvnI | CGCG | 2 cut(s) | 81, 132 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 129, 141, 223, 297 |
| NciI | CCSGG | 1 cut(s) | 438 |
| NdeII | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| NlaIII | CATG | 7 cut(s) | 44, 527, 538, 560, 625, 989, 1095 |
| NlaIV | GGNNCC | 2 cut(s) | 11, 582 |
| NmeAIII | GCCGAG | 1 cut(s) | 84 |
| NmuCI | GTSAC | 2 cut(s) | 337, 466 |
| NspI | RCATGY | 3 cut(s) | 538, 560, 1095 |
| NspV | TTCGAA | 1 cut(s) | 362 |
| OliI | CACNNNNGTG | 1 cut(s) | 965 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PceI | AGGCCT | 1 cut(s) | 1065 |
| PfeI | GAWTC | 4 cut(s) | 258, 797, 1187, 1202 |
| PkrI | GCNGC | 7 cut(s) | 134, 216, 219, 287, 290, 375, 486 |
| PleI | GAGTC | 1 cut(s) | 72 |
| PpsI | GAGTC | 1 cut(s) | 72 |
| Psp6I | CCWGG | 2 cut(s) | 583, 816 |
| PspGI | CCWGG | 2 cut(s) | 583, 816 |
| PspN4I | GGNNCC | 2 cut(s) | 11, 582 |
| PspPI | GGNCC | 1 cut(s) | 498 |
| PsuI | RGATCY | 1 cut(s) | 345 |
| PvuII | CAGCTG | 1 cut(s) | 1126 |
| RsaI | GTAC | 1 cut(s) | 84 |
| RsaNI | GTAC | 1 cut(s) | 83 |
| RseI | CAYNNNNRTG | 1 cut(s) | 965 |
| SacII | CCGCGG | 1 cut(s) | 133 |
| SaqAI | TTAA | 2 cut(s) | 882, 899 |
| SatI | GCNGC | 7 cut(s) | 133, 215, 218, 286, 289, 374, 485 |
| Sau3AI | GATC | 8 cut(s) | 34, 268, 279, 345, 520, 645, 903, 1106 |
| Sau96I | GGNCC | 1 cut(s) | 498 |
| SchI | GAGTC | 1 cut(s) | 73 |
| ScrFI | CCNGG | 3 cut(s) | 438, 585, 818 |
| SduI | GDGCHC | 1 cut(s) | 923 |
| SfaNI | GCATC | 1 cut(s) | 532 |
| SfcI | CTRYAG | 1 cut(s) | 1221 |
| Sfr303I | CCGCGG | 1 cut(s) | 133 |
| SfuI | TTCGAA | 1 cut(s) | 362 |
| SgrBI | CCGCGG | 1 cut(s) | 133 |
| SinI | GGWCC | 1 cut(s) | 498 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 965 |
| SmlI | CTYRAG | 1 cut(s) | 852 |
| SmoI | CTYRAG | 1 cut(s) | 852 |
| Sse9I | AATT | 3 cut(s) | 202, 474, 789 |
| SseBI | AGGCCT | 1 cut(s) | 1065 |
| SsiI | CCGC | 8 cut(s) | 79, 130, 132, 212, 218, 285, 300, 770 |
| SspMI | CTAG | 2 cut(s) | 1044, 1053 |
| StuI | AGGCCT | 1 cut(s) | 1065 |
| StyD4I | CCNGG | 3 cut(s) | 436, 583, 816 |
| TaaI | ACNGT | 4 cut(s) | 177, 428, 568, 1222 |
| TaiI | ACGT | 2 cut(s) | 456, 1086 |
| TaqI | TCGA | 3 cut(s) | 362, 519, 906 |
| TaqII | GACCGA | 2 cut(s) | 107, 515 |
| TasI | AATT | 3 cut(s) | 202, 474, 789 |
| TauI | GCSGC | 3 cut(s) | 135, 220, 288 |
| TfiI | GAWTC | 4 cut(s) | 258, 797, 1187, 1202 |
| Tru1I | TTAA | 2 cut(s) | 882, 899 |
| Tru9I | TTAA | 2 cut(s) | 882, 899 |
| TscAI | CASTG | 4 cut(s) | 346, 571, 928, 935 |
| TseFI | GTSAC | 2 cut(s) | 337, 466 |
| TseI | GCWGC | 4 cut(s) | 214, 288, 373, 484 |
| Tsp45I | GTSAC | 2 cut(s) | 337, 466 |
| TspDTI | ATGAA | 5 cut(s) | 60, 693, 876, 1002, 1044 |
| TspGWI | ACGGA | 1 cut(s) | 421 |
| TspRI | CASTG | 4 cut(s) | 346, 571, 928, 935 |
| VpaK11BI | GGWCC | 1 cut(s) | 498 |
| XapI | RAATTY | 1 cut(s) | 474 |
| XceI | RCATGY | 3 cut(s) | 538, 560, 1095 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1163 |
| XspI | CTAG | 2 cut(s) | 1044, 1053 |
| ZraI | GACGTC | 1 cut(s) | 1084 |