Prupe.7G252000_v2.0.a1

heparanase-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21277775 .. 21281468
3694 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G252000.2

Sequence Viewer

Length: 1629 bp
ATGGGTTCTCATTTCTGGCAAATGGGGTTGTATTTCTGGGTCTGTTTCTCTGCTATCAGCTTCATTCATTCTGTAAATTCACAGGGCTTCGGAGGTGGAAGTATTGAAGGCACTGTCCACGTTAATGGCAAAGATGCCATTGGTAAAATTGATGATGATTTTATTTGTGCAACTTTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGGACATGCAGCTGGGTTCGTGCTTCTTTCCTCAATCTGAATCTAAGCAGCATTATCTTATTAAATGCCGTGAAGGCTTTCTCACCCTTGAAACTTAGATTGGGGGGTACCTTGCAAGATAAGGTCTTATATGCTACACCAGACAATAAGCAACGCTGTGTTCCTTTTCAAAAAAGCACCACAGAGATGTTTGGTTTTACTCCGGGGTGCTTACCCATGAACAGATGGGATGAATTAAACTCCTTTTTTCAGAAATCTGGGGCCAAGATTATCTTTGGATTAAATGCTCTCACTGGACGAACAATACATTCTAATGGTACTGCAACTGGAGCTTGGGACTACAAAAATTCTGAGTCTTTCATCCGTTACAGTGTTAAAAAGAACTACACAGTACATGGTTGGGAGCTTGGGAATGAATTGTGCGGACATGGAATTGGAACAACAATCGGAGCGAGTCAATACGTCTCTGATACAGCTTCTCTGCAAAAGATAATACACGATGTATACAAGGGTATTGAACCAAAGCCACTAATCCTATCACCTGGAGGATTCTTTGATGCAAAGTGGTTCAAAGACTATACAGATAAAACAACCACATCCTTGGACGTGGTCACCCACCATATTTATAATCTAGGGCCAGGGGTTGATCAACACCTTATTGAAAAGATTCTTGATCCGTCCTATCTCGACGGTATTGCTAGCACATTTAGCAACCTCCGTGACATCCTAAAGAGTTCTGCAACTTCAGCAGCTGCATGGGTTGGGGAAGCAGGAGGTGCTTACAACAGCGGCCGTCATCTTGTCAGCAATTCATTTGTATTTAGTTTCTGGTATTTAGATCAGCTTGCTATGTCAGCAGCTTATGATACCAAAACGTACTGCAGACAGACATTGATTGGTGGAAACTATGGTTTACTCAACACTACTACCTACGAACCCAATCCAGACTACTACAGTGCTCTTCTTTGGCACCGATTGATGGGAAGAAATGTACTGGCAACCAGCTTTTCTGGACCGAAAAAGATACGTGCTTACGCACACTGTGCAAAACAATCCAAAGGGATTACAGTACTACTGATCAACCTACAAAACACGACGACAGTGGAGGCAAGAGTTGCATTCAACACTTCCTGGACTTTGCGACATAAACACAAATCTCACAAGTCTCATAGAGCACAGCTGAAGTTCCATCAGGGTTTGAGAAGTGAAACAGTAAGAGAAGAATACCATCTAACAGCAAAGGATGGAAATTTACAAAGCCAAACCATGCTGCTAAATGGAAACGCTTTGACCTTAAATTCATCTGGGATCATACCTAACTTAGACCCTGTATATGTAAATTCATCAGAACCAATTTTGGTTGGTCCATCTTCAATTGTATTTGCTCACATACCATATGTTGTTCTGCCTGCTTGCAGGTAG

Protein Analysis

543

Amino Acids

60.07

Weight (kDa)

8.8

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 834
Acc36I ACCTGC 1 cut(s) 1614
Acc65I GGTACC 1 cut(s) 314
AccB1I GGYRCC 2 cut(s) 314, 1176
AccI GTMKAC 1 cut(s) 711
AciI CCGC 2 cut(s) 630, 996
AclWI GGATC 2 cut(s) 875, 1523
AcoI YGGCCR 1 cut(s) 997
AcsI RAATTY 5 cut(s) 76, 553, 1456, 1504, 1546
AcuI CTGAAG 2 cut(s) 936, 1409
AdeI CACNNNGTG 1 cut(s) 1250
AfaI GTAC 6 cut(s) 316, 526, 600, 1085, 1200, 1278
AfiI CCNNNNNNNGG 1 cut(s) 1186
AgsI TTSAA 8 cut(s) 107, 298, 377, 725, 778, 869, 1330, 1581
AjiI CACGTC 1 cut(s) 814
AjnI CCWGG 3 cut(s) 748, 844, 1337
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
Alw21I GWGCWC 2 cut(s) 1168, 1384
Alw26I GTCTC 2 cut(s) 676, 1377
AlwI GGATC 2 cut(s) 875, 1523
AlwNI CAGNNNCTG 1 cut(s) 959
AoxI GGCC 4 cut(s) 185, 468, 842, 997
ApeKI GCWGC 6 cut(s) 216, 255, 956, 959, 1064, 1477
ApoI RAATTY 5 cut(s) 76, 553, 1456, 1504, 1546
Asp700I GAANNNNTTC 2 cut(s) 284, 873
Asp718I GGTACC 1 cut(s) 314
AspS9I GGNCC 4 cut(s) 468, 842, 1220, 1571
AsuC2I CCSGG 1 cut(s) 411
AsuHPI GGTGA 3 cut(s) 282, 738, 811
AsuNHI GCTAGC 1 cut(s) 905
AvaII GGWCC 2 cut(s) 1220, 1571
BanI GGYRCC 2 cut(s) 314, 1176
Bbv12I GWGCWC 2 cut(s) 1168, 1384
BbvI GCAGC 6 cut(s) 228, 267, 946, 968, 1076, 1464
BccI CCATC 6 cut(s) 426, 1180, 1404, 1443, 1445, 1582
BceAI ACGGC 2 cut(s) 260, 984
BcgI CGANNNNNNTGC 2 cut(s) 884, 918
BciT130I CCWGG 3 cut(s) 750, 846, 1339
BclI TGATCA 2 cut(s) 853, 1284
BcnI CCSGG 1 cut(s) 411
BcoDI GTCTC 2 cut(s) 676, 1377
BfaI CTAG 2 cut(s) 839, 906
BfmI CTRYAG 2 cut(s) 1087, 1159
BfuAI ACCTGC 1 cut(s) 1614
BglI GCCNNNNNGGC 1 cut(s) 281
BisI GCNGC 7 cut(s) 217, 256, 957, 960, 997, 1065, 1478
BlsI GCNGC 7 cut(s) 218, 257, 958, 961, 998, 1066, 1479
BmcAI AGTACT 1 cut(s) 1278
Bme1390I CCNGG 4 cut(s) 411, 750, 846, 1339
Bme18I GGWCC 2 cut(s) 1220, 1571
BmgBI CACGTC 1 cut(s) 814
BmgT120I GGNCC 4 cut(s) 468, 842, 1220, 1571
BmiI GGNNCC 3 cut(s) 316, 469, 1178
BmrFI CCNGG 4 cut(s) 411, 750, 846, 1339
BmsI GCATC 2 cut(s) 124, 754
BmtI GCTAGC 1 cut(s) 909
BpmI CTGGAG 2 cut(s) 555, 771
BpuMI CCSGG 1 cut(s) 411
BsaAI YACGTR 1 cut(s) 1235
BsaJI CCNNGG 3 cut(s) 410, 807, 845
Bsc4I CCNNNNNNNGG 1 cut(s) 1186
Bse1I ACTGG 3 cut(s) 505, 538, 1206
BseBI CCWGG 3 cut(s) 750, 846, 1339
BseDI CCNNGG 3 cut(s) 410, 807, 845
BseGI GGATG 5 cut(s) 442, 567, 803, 930, 1456
BseLI CCNNNNNNNGG 1 cut(s) 1186
BseMII CTCAG 2 cut(s) 183, 549
BseNI ACTGG 3 cut(s) 505, 538, 1206
BseX3I CGGCCG 1 cut(s) 997
BseXI GCAGC 6 cut(s) 228, 267, 946, 968, 1076, 1464
BseYI CCCAGC 1 cut(s) 219
Bsh1285I CGRYCG 1 cut(s) 1000
BshFI GGCC 4 cut(s) 187, 470, 844, 999
BshNI GGYRCC 2 cut(s) 314, 1176
BsiEI CGRYCG 1 cut(s) 1000
BsiHKAI GWGCWC 2 cut(s) 1168, 1384
BsiSI CCGG 1 cut(s) 410
BslFI GGGAC 2 cut(s) 223, 557
BslI CCNNNNNNNGG 1 cut(s) 1186
BsmAI GTCTC 2 cut(s) 676, 1377
BsmBI CGTCTC 1 cut(s) 676
BsmFI GGGAC 2 cut(s) 223, 557
BsmI GAATGC 1 cut(s) 1325
BsnI GGCC 4 cut(s) 187, 470, 844, 999
Bsp1286I GDGCHC 2 cut(s) 1168, 1384
Bsp143I GATC 5 cut(s) 853, 880, 1045, 1284, 1515
BspACI CCGC 2 cut(s) 630, 996
BspANI GGCC 4 cut(s) 187, 470, 844, 999
BspCNI CTCAG 2 cut(s) 184, 550
BspLI GGNNCC 3 cut(s) 316, 469, 1178
BspMAI CTGCAG 1 cut(s) 1091
BspMI ACCTGC 1 cut(s) 1614
BspOI GCTAGC 1 cut(s) 909
BspPI GGATC 2 cut(s) 875, 1523
BspQI GCTCTTC 1 cut(s) 1173
BspT107I GGYRCC 2 cut(s) 314, 1176
BsrI ACTGG 3 cut(s) 505, 538, 1206
BssECI CCNNGG 3 cut(s) 410, 807, 845
BssMI GATC 5 cut(s) 853, 880, 1045, 1284, 1515
BssNAI GTATAC 1 cut(s) 712
BssT1I CCWWGG 1 cut(s) 807
Bst1107I GTATAC 1 cut(s) 712
Bst2UI CCWGG 3 cut(s) 750, 846, 1339
Bst4CI ACNGT 9 cut(s) 115, 578, 598, 899, 1163, 1250, 1276, 1309, 1420
Bst6I CTCTTC 1 cut(s) 1173
BstAPI GCANNNNNTGC 3 cut(s) 983, 1250, 1322
BstBAI YACGTR 1 cut(s) 1235
BstC8I GCNNGC 4 cut(s) 907, 1053, 1617, 1621
BstDEI CTNAG 5 cut(s) 192, 251, 302, 558, 1528
BstEII GGTNACC 1 cut(s) 817
BstF5I GGATG 5 cut(s) 442, 567, 803, 930, 1456
BstKTI GATC 5 cut(s) 856, 883, 1048, 1287, 1518
BstMAI GTCTC 2 cut(s) 676, 1377
BstMBI GATC 5 cut(s) 853, 880, 1045, 1284, 1515
BstMCI CGRYCG 1 cut(s) 1000
BstMWI GCNNNNNNNGC 8 cut(s) 281, 536, 915, 953, 983, 1061, 1250, 1322
BstNI CCWGG 3 cut(s) 750, 846, 1339
BstNSI RCATGY 1 cut(s) 216
BstPI GGTNACC 1 cut(s) 817
BstSCI CCNGG 4 cut(s) 409, 748, 844, 1337
BstSFI CTRYAG 2 cut(s) 1087, 1159
BstV1I GCAGC 6 cut(s) 228, 267, 946, 968, 1076, 1464
BstXI CCANNNNNNTGG 2 cut(s) 125, 808
BstZ17I GTATAC 1 cut(s) 712
BstZI CGGCCG 1 cut(s) 997
BsuRI GGCC 4 cut(s) 187, 470, 844, 999
BtrI CACGTC 1 cut(s) 814
BtsCI GGATG 5 cut(s) 442, 567, 803, 930, 1456
BtsIMutI CAGTG 6 cut(s) 111, 498, 583, 1168, 1246, 1314
BveI ACCTGC 1 cut(s) 1614
Cac8I GCNNGC 4 cut(s) 907, 1053, 1617, 1621
CaiI CAGNNNCTG 1 cut(s) 959
Cfr13I GGNCC 4 cut(s) 468, 842, 1220, 1571
Csp6I GTAC 6 cut(s) 315, 525, 599, 1084, 1199, 1277
CviAII CATG 6 cut(s) 213, 424, 602, 635, 963, 1474
CviQI GTAC 6 cut(s) 315, 525, 599, 1084, 1199, 1277
DdeI CTNAG 5 cut(s) 192, 251, 302, 558, 1528
DpnI GATC 5 cut(s) 855, 882, 1047, 1286, 1517
DpnII GATC 5 cut(s) 853, 880, 1045, 1284, 1515
DraIII CACNNNGTG 1 cut(s) 1250
EaeI YGGCCR 1 cut(s) 997
EagI CGGCCG 1 cut(s) 997
Eam1104I CTCTTC 1 cut(s) 1173
EarI CTCTTC 1 cut(s) 1173
EclXI CGGCCG 1 cut(s) 997
Eco130I CCWWGG 1 cut(s) 807
Eco47I GGWCC 2 cut(s) 1220, 1571
Eco52I CGGCCG 1 cut(s) 997
Eco57I CTGAAG 2 cut(s) 936, 1409
Eco91I GGTNACC 1 cut(s) 817
EcoO65I GGTNACC 1 cut(s) 817
EcoRII CCWGG 3 cut(s) 748, 844, 1337
EcoT14I CCWWGG 1 cut(s) 807
ErhI CCWWGG 1 cut(s) 807
Esp3I CGTCTC 1 cut(s) 676
FaeI CATG 6 cut(s) 216, 427, 605, 638, 966, 1477
FalI AAGNNNNNCTT 2 cut(s) 464, 496
FaqI GGGAC 2 cut(s) 223, 557
FatI CATG 6 cut(s) 212, 423, 601, 634, 962, 1473
FauNDI CATATG 1 cut(s) 1603
FbaI TGATCA 2 cut(s) 853, 1284
FblI GTMKAC 1 cut(s) 711
Fnu4HI GCNGC 7 cut(s) 217, 256, 957, 960, 997, 1065, 1478
FokI GGATG 5 cut(s) 449, 554, 790, 917, 1463
Fsp4HI GCNGC 7 cut(s) 217, 256, 957, 960, 997, 1065, 1478
FspBI CTAG 2 cut(s) 839, 906
GluI GCNGC 7 cut(s) 217, 256, 957, 960, 997, 1065, 1478
GsaI CCCAGC 1 cut(s) 223
GsuI CTGGAG 2 cut(s) 555, 771
HaeIII GGCC 4 cut(s) 187, 470, 844, 999
HapII CCGG 1 cut(s) 410
Hin1II CATG 6 cut(s) 216, 427, 605, 638, 966, 1477
HinfI GANTC 5 cut(s) 247, 560, 661, 756, 874
HpaII CCGG 1 cut(s) 410
HphI GGTGA 3 cut(s) 282, 738, 811
Hpy166II GTNNAC 3 cut(s) 118, 712, 1121
Hpy188I TCNGA 7 cut(s) 92, 246, 459, 559, 656, 676, 1555
Hpy188III TCNNGA 5 cut(s) 191, 878, 893, 1151, 1218
Hpy8I GTNNAC 3 cut(s) 118, 712, 1121
Hpy99I CGWCG 2 cut(s) 899, 1306
HpyAV CCTTC 2 cut(s) 101, 274
HpyCH4III ACNGT 9 cut(s) 115, 578, 598, 899, 1163, 1250, 1276, 1309, 1420
HpyCH4IV ACGT 5 cut(s) 120, 669, 813, 1082, 1234
HpyF10VI GCNNNNNNNGC 8 cut(s) 281, 536, 915, 953, 983, 1061, 1250, 1322
HpyF3I CTNAG 5 cut(s) 192, 251, 302, 558, 1528
HpySE526I ACGT 5 cut(s) 120, 669, 813, 1082, 1234
Hsp92II CATG 6 cut(s) 216, 427, 605, 638, 966, 1477
KpnI GGTACC 1 cut(s) 318
Ksp22I TGATCA 2 cut(s) 853, 1284
Kzo9I GATC 5 cut(s) 853, 880, 1045, 1284, 1515
LguI GCTCTTC 1 cut(s) 1173
LmnI GCTCC 3 cut(s) 536, 610, 656
Lsp1109I GCAGC 6 cut(s) 228, 267, 946, 968, 1076, 1464
LweI GCATC 2 cut(s) 124, 754
MaeI CTAG 2 cut(s) 839, 906
MaeII ACGT 5 cut(s) 120, 669, 813, 1082, 1234
MaeIII GTNAC 4 cut(s) 200, 572, 817, 926
MalI GATC 5 cut(s) 855, 882, 1047, 1286, 1517
MboI GATC 5 cut(s) 853, 880, 1045, 1284, 1515
MboII GAAGA 4 cut(s) 1160, 1203, 1439, 1569
MfeI CAATTG 1 cut(s) 1581
MhlI GDGCHC 2 cut(s) 1168, 1384
MlyI GAGTC 2 cut(s) 569, 670
MnlI CCTC 7 cut(s) 86, 198, 248, 746, 932, 974, 1306
MroXI GAANNNNTTC 2 cut(s) 284, 873
MseI TTAA 6 cut(s) 123, 269, 443, 488, 582, 1502
MslI CAYNNNNRTG 3 cut(s) 123, 392, 519
MspA1I CMGCKG 4 cut(s) 219, 959, 996, 1387
MspI CCGG 1 cut(s) 410
MspR9I CCNGG 4 cut(s) 411, 750, 846, 1339
MunI CAATTG 1 cut(s) 1581
Mva1269I GAATGC 1 cut(s) 1325
MvaI CCWGG 3 cut(s) 750, 846, 1339
MwoI GCNNNNNNNGC 8 cut(s) 281, 536, 915, 953, 983, 1061, 1250, 1322
NciI CCSGG 1 cut(s) 411
NdeI CATATG 1 cut(s) 1603
NdeII GATC 5 cut(s) 853, 880, 1045, 1284, 1515
NheI GCTAGC 1 cut(s) 905
NlaIII CATG 6 cut(s) 216, 427, 605, 638, 966, 1477
NlaIV GGNNCC 3 cut(s) 316, 469, 1178
NmuCI GTSAC 3 cut(s) 200, 817, 926
NspI RCATGY 1 cut(s) 216
PciSI GCTCTTC 1 cut(s) 1173
PctI GAATGC 1 cut(s) 1325
PdmI GAANNNNTTC 2 cut(s) 284, 873
PfeI GAWTC 3 cut(s) 247, 756, 874
PflFI GACNNNGTC 1 cut(s) 815
PfoI TCCNGGA 1 cut(s) 1337
PkrI GCNGC 7 cut(s) 218, 257, 958, 961, 998, 1066, 1479
PleI GAGTC 2 cut(s) 568, 669
PpsI GAGTC 2 cut(s) 568, 669
Ppu21I YACGTR 1 cut(s) 1235
PsiI TTATAA 1 cut(s) 834
Psp6I CCWGG 3 cut(s) 748, 844, 1337
PspEI GGTNACC 1 cut(s) 817
PspFI CCCAGC 1 cut(s) 219
PspGI CCWGG 3 cut(s) 748, 844, 1337
PspN4I GGNNCC 3 cut(s) 316, 469, 1178
PspPI GGNCC 4 cut(s) 468, 842, 1220, 1571
PstI CTGCAG 1 cut(s) 1091
PstNI CAGNNNCTG 1 cut(s) 959
PsyI GACNNNGTC 1 cut(s) 815
PvuII CAGCTG 3 cut(s) 219, 959, 1387
RsaI GTAC 6 cut(s) 316, 526, 600, 1085, 1200, 1278
RsaNI GTAC 6 cut(s) 315, 525, 599, 1084, 1199, 1277
RseI CAYNNNNRTG 3 cut(s) 123, 392, 519
SapI GCTCTTC 1 cut(s) 1173
SaqAI TTAA 6 cut(s) 123, 269, 443, 488, 582, 1502
SatI GCNGC 7 cut(s) 217, 256, 957, 960, 997, 1065, 1478
Sau3AI GATC 5 cut(s) 853, 880, 1045, 1284, 1515
Sau96I GGNCC 4 cut(s) 468, 842, 1220, 1571
ScaI AGTACT 1 cut(s) 1278
SchI GAGTC 2 cut(s) 569, 670
ScrFI CCNGG 4 cut(s) 411, 750, 846, 1339
SduI GDGCHC 2 cut(s) 1168, 1384
SfaNI GCATC 2 cut(s) 124, 754
SfcI CTRYAG 2 cut(s) 1087, 1159
SinI GGWCC 2 cut(s) 1220, 1571
SmiMI CAYNNNNRTG 3 cut(s) 123, 392, 519
SsiI CCGC 2 cut(s) 630, 996
SspMI CTAG 2 cut(s) 839, 906
StyD4I CCNGG 4 cut(s) 409, 748, 844, 1337
StyI CCWWGG 1 cut(s) 807
TaaI ACNGT 9 cut(s) 115, 578, 598, 899, 1163, 1250, 1276, 1309, 1420
TaiI ACGT 5 cut(s) 123, 672, 816, 1085, 1237
TaqI TCGA 1 cut(s) 894
TaqII GACCGA 1 cut(s) 1237
TatI WGTACW 3 cut(s) 598, 1198, 1276
TauI GCSGC 1 cut(s) 999
TfiI GAWTC 3 cut(s) 247, 756, 874
Tru1I TTAA 6 cut(s) 123, 269, 443, 488, 582, 1502
Tru9I TTAA 6 cut(s) 123, 269, 443, 488, 582, 1502
TscAI CASTG 6 cut(s) 118, 505, 583, 1168, 1253, 1314
TseFI GTSAC 3 cut(s) 200, 817, 926
TseI GCWGC 6 cut(s) 216, 255, 956, 959, 1064, 1477
Tsp45I GTSAC 3 cut(s) 200, 817, 926
TspDTI ATGAA 9 cut(s) 52, 56, 440, 453, 556, 636, 1008, 1497, 1539
TspGWI ACGGA 3 cut(s) 560, 873, 914
TspRI CASTG 6 cut(s) 118, 505, 583, 1168, 1253, 1314
Tth111I GACNNNGTC 1 cut(s) 815
VpaK11BI GGWCC 2 cut(s) 1220, 1571
XapI RAATTY 5 cut(s) 76, 553, 1456, 1504, 1546
XceI RCATGY 1 cut(s) 216
XmiI GTMKAC 1 cut(s) 711
XmnI GAANNNNTTC 2 cut(s) 284, 873
XspI CTAG 2 cut(s) 839, 906
ZrmI AGTACT 1 cut(s) 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.