Rh2BG026000

heparanase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
1728270 .. 1731380
3111 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG026000.1

Sequence Viewer

Length: 1665 bp
ATGGATTCTCAAATTTGGAGAGCAGGGATGTGTTTCTGGGTGTGCCTGTTTGGTTTCTTGAGCTTCATTCATTGTGTGAGTTCAGAAGATGGAATAGGAGGAGGTAGTACTGAAGGTTTGGTTAGAATTGATGGGAAAGAACCCATTGGGAAAATAGATGAAGATTTTGTTTGTGCAACTTTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGAACTTGCAGCTGGGGCAAGGCGACTCTCCTTAATCTGGATCTAAGTAACACTATCTTATTAAATGCCATAAAGGCTTTTTCACCATTGAAACTTAGATTGGGAGGTACCTTGCAAGATAAAGTCATATATGATACAGAAGACAATAAAGAACCTTGCCCAGTTCCTTTTGTTAAAAATACCACAGCTATGTTTGGATTTAATAAGGGGTGCTTACCCATGAAGAGATGGGATGAATTAAACTCCTTTTTTCTGAGAACAGGGGCTAAGATTATCTTTGGATTAAATGCCCTCCCCGGACGAACTTTACAGAGTGATGGCTCTGCAACTGGAGCTTGGAACTTTACCAATGCCGAATCTTTCATTCGGTACACTGTCAAACACAACTACTCTATAGCTGGATGGGAGCTAGGGAATGAGCTATGTGGGCGTGGAGTTGGAACATCAGTAGCAGCAAGTCAGTATGTCAATGATACAGCTTCTCTGCATAAGATAGTACAGAATGTATACAAGGGTGTTGGACTAAAGCCACTAATCTTATCACCTGGAGGGTTCTTTGATGCACCTTGGTTCAAAGAACTTGCAGATAAAACCACCACTTCATTAGATGCGGTCACTCACCATATATATAATCTAGGGCCAGGGGTTGATCAACACCTTATTGAAAAGATTCTTGATCCGGCGTATCTGGATGGTATTGCTAACACATTTAGCAGCCTTCAAAACATCCTAAAGACCTCTGCAACTTCAGCAAGTGCATGGGTTGGGGAAGCAGGAGGTGCTTATAACAGCGGTCATCATCTTGTCACGGATGCATTCGTGTTTAGTTTCTGGTATTTGGATCAGCTTGGTATGTCTGCATCTTATGATACCAAAACATATTGCAGACAGACATTGATTGGTGGAAACTATGGTTTACTCAACACTACTACCTTTGTTCCCAATCCAGACTACTACAGCGCTCTTCTTTGGCACCGATTAATGGGAAGAAATGTACTGTCAACGAGGTTTGCTGGACCCAAAAAGATACGTGCTTATACACACTGTGCAAAACAATCTAAAGGGATTGTAGTACTATTGATCAACCTACACAACACCACCATTGTTCAGGCCAAGGTTGCCTTCAACAGTACCTGGAGTTTGCGACATAGACACAAATCTCACAAGTCTCATAGATCACATATGCTGAAGAAGCACCATAGCGGTCTAAGAAGCTCAACAGAAAGAGTGAGAGGTGATACAGAAAGAGAAGAATACCATTTGACACCAAAGGATGGAAATATACAAAGCCAAACCATGCTGCTTAATGGAAACGCTTTGAATTTGGATTCATCTGGGAACATACCTACATTAGAACCTGTTTTTGTAAATTCATCGCAACCGATAATTGTTGCTCCATTTTCAATTGTATTTGTTCACATACCATACGTTGTTCCCCCTGCTTGCAGGTAG

Protein Analysis

554

Amino Acids

61.24

Weight (kDa)

8.58

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_79n PF03662 39 - 355 5.9e-156 Glycosyl hydrolase family 79, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
Acc36I ACCTGC 1 cut(s) 1650
Acc65I GGTACC 1 cut(s) 320
AccB1I GGYRCC 2 cut(s) 320, 1185
AccB7I CCANNNNNTGG 1 cut(s) 1487
AccI GTMKAC 1 cut(s) 720
AciI CCGC 3 cut(s) 824, 1005, 1416
AclWI GGATC 3 cut(s) 261, 884, 1062
AcsI RAATTY 3 cut(s) 12, 1534, 1582
AcuI CTGAAG 3 cut(s) 132, 945, 1421
AdeI CACNNNGTG 1 cut(s) 1259
AfaI GTAC 7 cut(s) 109, 322, 584, 711, 1209, 1287, 1345
AfeI AGCGCT 1 cut(s) 1174
AfiI CCNNNNNNNGG 3 cut(s) 250, 1195, 1487
AgsI TTSAA 7 cut(s) 304, 787, 878, 935, 1339, 1534, 1617
AjnI CCWGG 3 cut(s) 757, 853, 1346
AjuI GAANNNNNNNTTGG 4 cut(s) 296, 328, 1319, 1351
Alw26I GTCTC 1 cut(s) 1386
AlwI GGATC 3 cut(s) 261, 884, 1062
AlwNI CAGNNNCTG 1 cut(s) 1347
Aor51HI AGCGCT 1 cut(s) 1174
AoxI GGCC 3 cut(s) 191, 851, 1323
ApeKI GCWGC 4 cut(s) 222, 665, 927, 1513
ApoI RAATTY 3 cut(s) 12, 1534, 1582
AseI ATTAAT 1 cut(s) 1193
Asp700I GAANNNNTTC 1 cut(s) 882
Asp718I GGTACC 1 cut(s) 320
AspLEI GCGC 1 cut(s) 1175
AspS9I GGNCC 2 cut(s) 851, 1229
AsuC2I CCSGG 1 cut(s) 510
AsuHPI GGTGA 4 cut(s) 288, 747, 824, 1460
AvaII GGWCC 1 cut(s) 1229
BanI GGYRCC 2 cut(s) 320, 1185
BbsI GAAGAC 1 cut(s) 360
BbvI GCAGC 4 cut(s) 234, 677, 939, 1500
BccI CCATC 7 cut(s) 83, 125, 435, 524, 609, 899, 1481
BciT130I CCWGG 3 cut(s) 759, 855, 1348
BclI TGATCA 2 cut(s) 862, 1293
BcnI CCSGG 1 cut(s) 510
BcoDI GTCTC 1 cut(s) 1386
BfaI CTAG 2 cut(s) 623, 848
BfmI CTRYAG 2 cut(s) 606, 1168
BfoI RGCGCY 1 cut(s) 1176
BfuAI ACCTGC 1 cut(s) 1650
BglI GCCNNNNNGGC 1 cut(s) 287
BisI GCNGC 4 cut(s) 223, 666, 928, 1514
BlsI GCNGC 4 cut(s) 224, 667, 929, 1515
BmcAI AGTACT 2 cut(s) 109, 1287
Bme1390I CCNGG 4 cut(s) 510, 759, 855, 1348
Bme18I GGWCC 1 cut(s) 1229
BmgT120I GGNCC 2 cut(s) 851, 1229
BmiI GGNNCC 3 cut(s) 322, 1187, 1231
BmrFI CCNGG 4 cut(s) 510, 759, 855, 1348
BmrI ACTGGG 1 cut(s) 368
BmsI GCATC 4 cut(s) 763, 811, 1015, 1082
BmuI ACTGGG 1 cut(s) 368
BpiI GAAGAC 1 cut(s) 360
BpmI CTGGAG 3 cut(s) 564, 780, 1369
BpuEI CTTGAG 1 cut(s) 79
BpuMI CCSGG 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 1244
BsaJI CCNNGG 4 cut(s) 508, 779, 854, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 250, 1195, 1487
Bse1I ACTGG 2 cut(s) 374, 547
BseBI CCWGG 3 cut(s) 759, 855, 1348
BseDI CCNNGG 4 cut(s) 508, 779, 854, 1326
BseGI GGATG 7 cut(s) 33, 451, 620, 910, 939, 1030, 1492
BseLI CCNNNNNNNGG 3 cut(s) 250, 1195, 1487
BseMII CTCAG 2 cut(s) 189, 458
BseNI ACTGG 2 cut(s) 374, 547
BseRI GAGGAG 1 cut(s) 114
BseXI GCAGC 4 cut(s) 234, 677, 939, 1500
BseYI CCCAGC 1 cut(s) 225
BshFI GGCC 3 cut(s) 193, 853, 1325
BshNI GGYRCC 2 cut(s) 320, 1185
BsiSI CCGG 2 cut(s) 510, 893
BslI CCNNNNNNNGG 3 cut(s) 250, 1195, 1487
BsmAI GTCTC 1 cut(s) 1386
BsmI GAATGC 1 cut(s) 1028
BsnI GGCC 3 cut(s) 193, 853, 1325
Bsp143I GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
BspACI CCGC 3 cut(s) 824, 1005, 1416
BspANI GGCC 3 cut(s) 193, 853, 1325
BspCNI CTCAG 2 cut(s) 190, 459
BspLI GGNNCC 3 cut(s) 322, 1187, 1231
BspMI ACCTGC 1 cut(s) 1650
BspPI GGATC 3 cut(s) 261, 884, 1062
BspQI GCTCTTC 1 cut(s) 1182
BspT107I GGYRCC 2 cut(s) 320, 1185
BsrI ACTGG 2 cut(s) 374, 547
BssECI CCNNGG 4 cut(s) 508, 779, 854, 1326
BssMI GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
BssNAI GTATAC 1 cut(s) 721
BssT1I CCWWGG 2 cut(s) 779, 1326
Bst1107I GTATAC 1 cut(s) 721
Bst2UI CCWGG 3 cut(s) 759, 855, 1348
Bst4CI ACNGT 4 cut(s) 589, 1212, 1259, 1343
Bst6I CTCTTC 2 cut(s) 431, 1182
BstAPI GCANNNNNTGC 1 cut(s) 992
BstBAI YACGTR 1 cut(s) 1244
BstC8I GCNNGC 1 cut(s) 1657
BstDEI CTNAG 6 cut(s) 198, 257, 308, 467, 480, 1421
BstF5I GGATG 7 cut(s) 33, 451, 620, 910, 939, 1030, 1492
BstH2I RGCGCY 1 cut(s) 1176
BstHHI GCGC 1 cut(s) 1175
BstKTI GATC 6 cut(s) 256, 865, 892, 1057, 1296, 1391
BstMAI GTCTC 1 cut(s) 1386
BstMBI GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
BstMWI GCNNNNNNNGC 8 cut(s) 228, 287, 545, 640, 962, 992, 1331, 1405
BstNI CCWGG 3 cut(s) 759, 855, 1348
BstSCI CCNGG 4 cut(s) 508, 757, 853, 1346
BstSFI CTRYAG 2 cut(s) 606, 1168
BstV1I GCAGC 4 cut(s) 234, 677, 939, 1500
BstV2I GAAGAC 1 cut(s) 360
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
BstZ17I GTATAC 1 cut(s) 721
BsuRI GGCC 3 cut(s) 193, 853, 1325
BtgZI GCGATG 1 cut(s) 1572
BtsCI GGATG 7 cut(s) 33, 451, 620, 910, 939, 1030, 1492
BtsIMutI CAGTG 2 cut(s) 585, 1255
BveI ACCTGC 1 cut(s) 1650
Cac8I GCNNGC 1 cut(s) 1657
CaiI CAGNNNCTG 1 cut(s) 1347
CfoI GCGC 1 cut(s) 1175
Cfr13I GGNCC 2 cut(s) 851, 1229
Csp6I GTAC 7 cut(s) 108, 321, 583, 710, 1208, 1286, 1344
CviAII CATG 3 cut(s) 433, 972, 1510
CviQI GTAC 7 cut(s) 108, 321, 583, 710, 1208, 1286, 1344
DdeI CTNAG 6 cut(s) 198, 257, 308, 467, 480, 1421
DpnI GATC 6 cut(s) 255, 864, 891, 1056, 1295, 1390
DpnII GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
DraIII CACNNNGTG 1 cut(s) 1259
Eam1104I CTCTTC 2 cut(s) 431, 1182
EarI CTCTTC 2 cut(s) 431, 1182
Eco130I CCWWGG 2 cut(s) 779, 1326
Eco47I GGWCC 1 cut(s) 1229
Eco47III AGCGCT 1 cut(s) 1174
Eco57I CTGAAG 3 cut(s) 132, 945, 1421
EcoRII CCWGG 3 cut(s) 757, 853, 1346
EcoT14I CCWWGG 2 cut(s) 779, 1326
EcoT22I ATGCAT 1 cut(s) 1030
ErhI CCWWGG 2 cut(s) 779, 1326
FaeI CATG 3 cut(s) 436, 975, 1513
FalI AAGNNNNNCTT 6 cut(s) 410, 442, 473, 505, 1319, 1351
FatI CATG 3 cut(s) 432, 971, 1509
FauNDI CATATG 1 cut(s) 1395
FbaI TGATCA 2 cut(s) 862, 1293
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 4 cut(s) 223, 666, 928, 1514
FokI GGATG 7 cut(s) 40, 458, 627, 917, 926, 1037, 1499
Fsp4HI GCNGC 4 cut(s) 223, 666, 928, 1514
FspBI CTAG 2 cut(s) 623, 848
GlaI GCGC 1 cut(s) 1174
GluI GCNGC 4 cut(s) 223, 666, 928, 1514
GsaI CCCAGC 1 cut(s) 229
GsuI CTGGAG 3 cut(s) 564, 780, 1369
HaeII RGCGCY 1 cut(s) 1176
HaeIII GGCC 3 cut(s) 193, 853, 1325
HapII CCGG 2 cut(s) 510, 893
HhaI GCGC 1 cut(s) 1175
Hin1II CATG 3 cut(s) 436, 975, 1513
Hin6I GCGC 1 cut(s) 1173
HinP1I GCGC 1 cut(s) 1173
HincII GTYRAC 1 cut(s) 1215
HindII GTYRAC 1 cut(s) 1215
HinfI GANTC 5 cut(s) 5, 238, 569, 883, 1541
HpaII CCGG 2 cut(s) 510, 893
HphI GGTGA 4 cut(s) 288, 747, 824, 1460
Hpy166II GTNNAC 5 cut(s) 585, 721, 1130, 1215, 1630
Hpy188I TCNGA 2 cut(s) 85, 468
Hpy188III TCNNGA 6 cut(s) 58, 197, 251, 887, 902, 1160
Hpy8I GTNNAC 5 cut(s) 585, 721, 1130, 1215, 1630
HpyAV CCTTC 3 cut(s) 107, 941, 1345
HpyCH4III ACNGT 4 cut(s) 589, 1212, 1259, 1343
HpyCH4IV ACGT 2 cut(s) 1243, 1641
HpyF10VI GCNNNNNNNGC 8 cut(s) 228, 287, 545, 640, 962, 992, 1331, 1405
HpyF3I CTNAG 6 cut(s) 198, 257, 308, 467, 480, 1421
HpySE526I ACGT 2 cut(s) 1243, 1641
Hsp92II CATG 3 cut(s) 436, 975, 1513
HspAI GCGC 1 cut(s) 1173
KpnI GGTACC 1 cut(s) 324
Ksp22I TGATCA 2 cut(s) 862, 1293
Kzo9I GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
LguI GCTCTTC 1 cut(s) 1182
LmnI GCTCC 3 cut(s) 545, 619, 1612
Lsp1109I GCAGC 4 cut(s) 234, 677, 939, 1500
LweI GCATC 4 cut(s) 763, 811, 1015, 1082
MaeI CTAG 2 cut(s) 623, 848
MaeII ACGT 2 cut(s) 1243, 1641
MaeIII GTNAC 4 cut(s) 206, 260, 826, 1018
MalI GATC 6 cut(s) 255, 864, 891, 1056, 1295, 1390
MboI GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
MboII GAAGA 8 cut(s) 98, 173, 365, 448, 1169, 1212, 1414, 1475
MfeI CAATTG 1 cut(s) 1617
MflI RGATCY 1 cut(s) 253
MluCI AATT 7 cut(s) 12, 126, 449, 1534, 1582, 1599, 1617
MlyI GAGTC 1 cut(s) 232
MmeI TCCRAC 2 cut(s) 631, 712
Mph1103I ATGCAT 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 882
MseI TTAA 8 cut(s) 246, 275, 387, 414, 452, 497, 1193, 1518
MslI CAYNNNNRTG 1 cut(s) 401
MspA1I CMGCKG 2 cut(s) 225, 1005
MspI CCGG 2 cut(s) 510, 893
MspR9I CCNGG 4 cut(s) 510, 759, 855, 1348
MunI CAATTG 1 cut(s) 1617
Mva1269I GAATGC 1 cut(s) 1028
MvaI CCWGG 3 cut(s) 759, 855, 1348
MwoI GCNNNNNNNGC 8 cut(s) 228, 287, 545, 640, 962, 992, 1331, 1405
NciI CCSGG 1 cut(s) 510
NdeI CATATG 1 cut(s) 1395
NdeII GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
NlaIII CATG 3 cut(s) 436, 975, 1513
NlaIV GGNNCC 3 cut(s) 322, 1187, 1231
NmuCI GTSAC 3 cut(s) 206, 826, 1018
NsiI ATGCAT 1 cut(s) 1030
PciSI GCTCTTC 1 cut(s) 1182
PctI GAATGC 1 cut(s) 1028
PdmI GAANNNNTTC 1 cut(s) 882
PfeI GAWTC 4 cut(s) 5, 569, 883, 1541
PflMI CCANNNNNTGG 1 cut(s) 1487
PkrI GCNGC 4 cut(s) 224, 667, 929, 1515
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
Ppu21I YACGTR 1 cut(s) 1244
PshBI ATTAAT 1 cut(s) 1193
PsiI TTATAA 1 cut(s) 999
Psp6I CCWGG 3 cut(s) 757, 853, 1346
PspFI CCCAGC 1 cut(s) 225
PspGI CCWGG 3 cut(s) 757, 853, 1346
PspN4I GGNNCC 3 cut(s) 322, 1187, 1231
PspPI GGNCC 2 cut(s) 851, 1229
PstNI CAGNNNCTG 1 cut(s) 1347
PsuI RGATCY 1 cut(s) 253
PvuII CAGCTG 1 cut(s) 225
RsaI GTAC 7 cut(s) 109, 322, 584, 711, 1209, 1287, 1345
RsaNI GTAC 7 cut(s) 108, 321, 583, 710, 1208, 1286, 1344
RseI CAYNNNNRTG 1 cut(s) 401
SapI GCTCTTC 1 cut(s) 1182
SaqAI TTAA 8 cut(s) 246, 275, 387, 414, 452, 497, 1193, 1518
SatI GCNGC 4 cut(s) 223, 666, 928, 1514
Sau3AI GATC 6 cut(s) 253, 862, 889, 1054, 1293, 1388
Sau96I GGNCC 2 cut(s) 851, 1229
ScaI AGTACT 2 cut(s) 109, 1287
SchI GAGTC 1 cut(s) 232
ScrFI CCNGG 4 cut(s) 510, 759, 855, 1348
SfaNI GCATC 4 cut(s) 763, 811, 1015, 1082
SfcI CTRYAG 2 cut(s) 606, 1168
SinI GGWCC 1 cut(s) 1229
SmiMI CAYNNNNRTG 1 cut(s) 401
SmlI CTYRAG 1 cut(s) 58
SmoI CTYRAG 1 cut(s) 58
Sse9I AATT 7 cut(s) 12, 126, 449, 1534, 1582, 1599, 1617
SsiI CCGC 3 cut(s) 824, 1005, 1416
SspMI CTAG 2 cut(s) 623, 848
StyD4I CCNGG 4 cut(s) 508, 757, 853, 1346
StyI CCWWGG 2 cut(s) 779, 1326
TaaI ACNGT 4 cut(s) 589, 1212, 1259, 1343
TaiI ACGT 2 cut(s) 1246, 1644
TasI AATT 7 cut(s) 12, 126, 449, 1534, 1582, 1599, 1617
TatI WGTACW 4 cut(s) 107, 709, 1207, 1285
TfiI GAWTC 4 cut(s) 5, 569, 883, 1541
Tru1I TTAA 8 cut(s) 246, 275, 387, 414, 452, 497, 1193, 1518
Tru9I TTAA 8 cut(s) 246, 275, 387, 414, 452, 497, 1193, 1518
TscAI CASTG 2 cut(s) 592, 1262
TseFI GTSAC 3 cut(s) 206, 826, 1018
TseI GCWGC 4 cut(s) 222, 665, 927, 1513
Tsp45I GTSAC 3 cut(s) 206, 826, 1018
TspDTI ATGAA 9 cut(s) 55, 59, 174, 449, 462, 565, 804, 1533, 1575
TspGWI ACGGA 1 cut(s) 1037
TspRI CASTG 2 cut(s) 592, 1262
Van91I CCANNNNNTGG 1 cut(s) 1487
VpaK11BI GGWCC 1 cut(s) 1229
VspI ATTAAT 1 cut(s) 1193
XapI RAATTY 3 cut(s) 12, 1534, 1582
XmiI GTMKAC 1 cut(s) 720
XmnI GAANNNNTTC 1 cut(s) 882
XspI CTAG 2 cut(s) 623, 848
ZrmI AGTACT 2 cut(s) 109, 1287
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.