Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002821

Physical Location & Seq

Genomic Coordinates Forward (+)

21476178 .. 21480285

Gene Structure 4108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G256500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1032 bp

ATGGCGACGGCTCCCTCGTCTATCCACCTTCTCCACCAAGATTTTCTATGCCCAAAATATCCTCGCCTTTATCACAATTATCAATTCGGAACTCCTCGTCTCCGACGACGCCCCACTGGCACCGCCCGCCCGCCTTCCCGCTTTCCCTCTTTCGCCATTCGTGAATGGAAGTCGAGCACTGAGGAAAGTGAAAGCTCGGGTGTTGAGCTGTTAGCATGCCCAGTATGCTATGAACCGCTCATACGGAAAGGCCCTCCTGGTCTTAACCTGCAAGCAATATACAGGTCGGCTTTCAAGTGTAAGAAATGCGACAAGTCGTATTCAAGCAAAGACATTTACTTGGATCTTACTGTTATTGCCGGGTTGAAGGAGTACGTTGAAGTCAAACCAGCTGGGACCGAGTTATTCAGAAACCCTCTTGTTTCCTTCTTGTATGAAAGAGGCTGGCGCCAGAATTTTAACCGCAGTGGCTTCCCAGGTCTTGATGAAGAGTTTAAAATGGCTCAGGACTACTTTAAATCCGCTGAAGGTGGTGTTCTGCTGGATGTAAGCTGTGGGAGTGGTTTGTTTTCCAGAAAGTTTGCCAAATCCGGGACCTATTCTGGAGTTGTCGCGCTTGATTTTTCTGAGAATATGCTTCGCCAGTGTTACGATTTTCTTAAAAAAGACCCTACTCTTTTAGCTACTAATCTTGCTCTTGTGAGGGCAGATGTTTCTAGGCTTCCATTCCCTTCAGGTTCAGTCGGTGCTGTCCATGCTGGCGCAGCATTGCATTGCTGGCCCTCTCCTTCCAATGCTATTGCTGAAATAAGTCGTATATTACGAACTGGTGGCATCTTTGTCGGAACCACTTTCCTGCGGTATACTTCATCTACTCCCTGGATATTGAGGCCACTCAGAGAGAGGGCTCTGCAGAACTATAGCTATTTAACGGAAGAAGAGATTGAGGACTTGTGTACATCATCTGGTCTCATCAACTACTCAAGCAAAGTTCAGCAATCTTTCATCATGTTTTCTGCTCAGAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_11

Protein Analysis

344

Amino Acids

38.45

Weight (kDa)

9.11

Isoelectric Point (pI)

56.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41040
fragaria_vesca	FvH4_1g01890 FvH4_1g01891 FvH4_1g01891 FvH4_1g01891
malus_domestica	MD02G1016900.v1.1 MD15G1161300.v1.1 MD15G1161400.v1.1
prunus_persica	Prupe.7G256500_v2.0.a1
pyrus_communis	pycom02g01520 pycom15g14510
rosa_chinensis	RchiOBHm_Chr2g0086891 RchiOBHm_Chr2g0086901
rosa_laevigata	RLG00000015811 RLG00000015812 RLG00000015813 RLG00000015814
rosa_multiflora	Rmu_sc0009060.1_g000008 Rmu_sc0009060.1_g000009 Rmu_sc0009188.1_g000001 Rmu_sc0009188.1_g000003
rosa_roxburghii	Rroxscaffold_2G00154040 Rroxscaffold_2G00154050
rosa_rugosa	Rorug01G0470400 Rorug01G0470500
rosa_samantha	Rh2AG023200 Rh2AG023300 Rh2BG023700 Rh2BG023900 Rh2BG024000 Rh2CG024000 Rh2CG024100 Rh2CG024200 Rh2DG023600 Rh2DG024000 Rh2DG024100
rosa_wichuraiana	Rw2G001820 Rw2G001830 Rw2G001840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	276
AccB1I	GGYRCC	2 cut(s)	119, 447
AccBSI	CCGCTC	1 cut(s)	238
AccI	GTMKAC	1 cut(s)	863
AccII	CGCG	1 cut(s)	614
AciI	CCGC	8 cut(s)	123, 127, 131, 139, 236, 463, 522, 859
AclWI	GGATC	1 cut(s)	351
AcsI	RAATTY	1 cut(s)	454
AcuI	CTGAAG	2 cut(s)	546, 717
AcyI	GRCGYC	2 cut(s)	109, 448
AfaI	GTAC	2 cut(s)	374, 958
AfiI	CCNNNNNNNGG	1 cut(s)	591
AgsI	TTSAA	4 cut(s)	295, 324, 367, 380
AjnI	CCWGG	3 cut(s)	256, 475, 878
AluBI	AGCT	6 cut(s)	195, 208, 392, 552, 683, 924
AluI	AGCT	6 cut(s)	195, 208, 392, 552, 683, 924
Alw21I	GWGCWC	1 cut(s)	179
Alw26I	GTCTC	2 cut(s)	104, 974
AlwI	GGATC	1 cut(s)	351
Ama87I	CYCGRG	1 cut(s)	196
AoxI	GGCC	3 cut(s)	250, 779, 890
ApeKI	GCWGC	1 cut(s)	764
ApoI	RAATTY	1 cut(s)	454
AspLEI	GCGC	3 cut(s)	450, 616, 764
AspS9I	GGNCC	4 cut(s)	251, 396, 594, 780
AsuC2I	CCSGG	2 cut(s)	361, 592
AvaI	CYCGRG	1 cut(s)	196
AvaII	GGWCC	2 cut(s)	396, 594
BanI	GGYRCC	2 cut(s)	119, 447
BanII	GRGCYC	1 cut(s)	910
Bbv12I	GWGCWC	1 cut(s)	179
BbvI	GCAGC	1 cut(s)	776
BceAI	ACGGC	1 cut(s)	24
BcgI	CGANNNNNNTGC	2 cut(s)	823, 857
BciT130I	CCWGG	3 cut(s)	258, 477, 880
BcnI	CCSGG	2 cut(s)	361, 592
BcoDI	GTCTC	2 cut(s)	104, 974
BfaI	CTAG	1 cut(s)	717
BfmI	CTRYAG	2 cut(s)	911, 919
BfoI	RGCGCY	1 cut(s)	451
BfuAI	ACCTGC	1 cut(s)	276
BglI	GCCNNNNNGGC	1 cut(s)	117
BisI	GCNGC	1 cut(s)	765
BlsI	GCNGC	1 cut(s)	766
Bme1390I	CCNGG	5 cut(s)	258, 361, 477, 592, 880
Bme18I	GGWCC	2 cut(s)	396, 594
BmeT110I	CYCGRG	1 cut(s)	196
BmgT120I	GGNCC	4 cut(s)	251, 396, 594, 780
BmiI	GGNNCC	6 cut(s)	12, 121, 397, 449, 595, 847
BmrFI	CCNGG	5 cut(s)	258, 361, 477, 592, 880
BmrI	ACTGGG	1 cut(s)	215
BmsI	GCATC	1 cut(s)	843
BmuI	ACTGGG	1 cut(s)	215
BpmI	CTGGAG	1 cut(s)	624
Bpu10I	CCTNAGC	1 cut(s)	504
BpuEI	CTTGAG	1 cut(s)	967
BpuMI	CCSGG	2 cut(s)	361, 592
BsaHI	GRCGYC	2 cut(s)	109, 448
BsaI	GGTCTC	1 cut(s)	974
BsaJI	CCNNGG	2 cut(s)	475, 878
Bsc4I	CCNNNNNNNGG	1 cut(s)	591
Bse1I	ACTGG	4 cut(s)	121, 221, 643, 832
Bse3DI	GCAATG	2 cut(s)	767, 772
BseBI	CCWGG	3 cut(s)	258, 477, 880
BseDI	CCNNGG	2 cut(s)	475, 878
BseGI	GGATG	1 cut(s)	550
BseLI	CCNNNNNNNGG	1 cut(s)	591
BseMI	GCAATG	2 cut(s)	767, 772
BseMII	CTCAG	4 cut(s)	171, 518, 618, 910
BseNI	ACTGG	4 cut(s)	121, 221, 643, 832
BseRI	GAGGAG	1 cut(s)	84
BseXI	GCAGC	1 cut(s)	776
BseYI	CCCAGC	1 cut(s)	392
Bsh1236I	CGCG	1 cut(s)	614
BshFI	GGCC	3 cut(s)	252, 781, 892
BshNI	GGYRCC	2 cut(s)	119, 447
BsiHKAI	GWGCWC	1 cut(s)	179
BsiHKCI	CYCGRG	1 cut(s)	196
BsiSI	CCGG	2 cut(s)	360, 591
BslFI	GGGAC	2 cut(s)	409, 607
BslI	CCNNNNNNNGG	1 cut(s)	591
BsmAI	GTCTC	2 cut(s)	104, 974
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	2 cut(s)	409, 607
BsnI	GGCC	3 cut(s)	252, 781, 892
Bso31I	GGTCTC	1 cut(s)	974
BsoBI	CYCGRG	1 cut(s)	196
Bsp1286I	GDGCHC	2 cut(s)	179, 910
Bsp1407I	TGTACA	1 cut(s)	956
Bsp143I	GATC	1 cut(s)	343
BspACI	CCGC	8 cut(s)	123, 127, 131, 139, 236, 463, 522, 859
BspANI	GGCC	3 cut(s)	252, 781, 892
BspCNI	CTCAG	4 cut(s)	172, 517, 619, 909
BspFNI	CGCG	1 cut(s)	614
BspLI	GGNNCC	6 cut(s)	12, 121, 397, 449, 595, 847
BspMAI	CTGCAG	1 cut(s)	915
BspMI	ACCTGC	1 cut(s)	276
BspPI	GGATC	1 cut(s)	351
BspT107I	GGYRCC	2 cut(s)	119, 447
BspTNI	GGTCTC	1 cut(s)	974
BsrBI	CCGCTC	1 cut(s)	238
BsrDI	GCAATG	2 cut(s)	767, 772
BsrGI	TGTACA	1 cut(s)	956
BsrI	ACTGG	4 cut(s)	121, 221, 643, 832
BssECI	CCNNGG	2 cut(s)	475, 878
BssMI	GATC	1 cut(s)	343
BssNAI	GTATAC	1 cut(s)	864
BssNI	GRCGYC	2 cut(s)	109, 448
Bst1107I	GTATAC	1 cut(s)	864
Bst2UI	CCWGG	3 cut(s)	258, 477, 880
Bst4CI	ACNGT	1 cut(s)	352
Bst6I	CTCTTC	2 cut(s)	483, 933
BstACI	GRCGYC	2 cut(s)	109, 448
BstAUI	TGTACA	1 cut(s)	956
BstC8I	GCNNGC	7 cut(s)	127, 131, 217, 273, 446, 760, 779
BstDEI	CTNAG	5 cut(s)	180, 504, 627, 896, 1020
BstF5I	GGATG	1 cut(s)	550
BstFNI	CGCG	1 cut(s)	614
BstH2I	RGCGCY	1 cut(s)	451
BstHHI	GCGC	3 cut(s)	450, 616, 764
BstKTI	GATC	1 cut(s)	346
BstMAI	GTCTC	2 cut(s)	104, 974
BstMBI	GATC	1 cut(s)	343
BstMWI	GCNNNNNNNGC	6 cut(s)	117, 126, 225, 755, 764, 778
BstNI	CCWGG	3 cut(s)	258, 477, 880
BstNSI	RCATGY	1 cut(s)	219
BstSCI	CCNGG	5 cut(s)	256, 359, 475, 590, 878
BstSFI	CTRYAG	2 cut(s)	911, 919
BstUI	CGCG	1 cut(s)	614
BstV1I	GCAGC	1 cut(s)	776
BstX2I	RGATCY	1 cut(s)	343
BstYI	RGATCY	1 cut(s)	343
BstZ17I	GTATAC	1 cut(s)	864
BsuRI	GGCC	3 cut(s)	252, 781, 892
BtsCI	GGATG	1 cut(s)	550
BtsI	GCAGTG	1 cut(s)	472
BtsIMutI	CAGTG	4 cut(s)	114, 177, 472, 650
BveI	ACCTGC	1 cut(s)	276
Cac8I	GCNNGC	7 cut(s)	127, 131, 217, 273, 446, 760, 779
CfoI	GCGC	3 cut(s)	450, 616, 764
Cfr13I	GGNCC	4 cut(s)	251, 396, 594, 780
CseI	GACGC	1 cut(s)	117
Csp6I	GTAC	2 cut(s)	373, 957
CviAII	CATG	3 cut(s)	216, 755, 1009
CviQI	GTAC	2 cut(s)	373, 957
DdeI	CTNAG	5 cut(s)	180, 504, 627, 896, 1020
DinI	GGCGCC	1 cut(s)	449
DpnI	GATC	1 cut(s)	345
DpnII	GATC	1 cut(s)	343
DraI	TTTAAA	2 cut(s)	496, 517
Eam1104I	CTCTTC	2 cut(s)	483, 933
EarI	CTCTTC	2 cut(s)	483, 933
Eco24I	GRGCYC	1 cut(s)	910
Eco31I	GGTCTC	1 cut(s)	974
Eco47I	GGWCC	2 cut(s)	396, 594
Eco57I	CTGAAG	2 cut(s)	546, 717
Eco88I	CYCGRG	1 cut(s)	196
EcoO109I	RGGNCCY	2 cut(s)	251, 594
EcoRII	CCWGG	3 cut(s)	256, 475, 878
EcoT38I	GRGCYC	1 cut(s)	910
EgeI	GGCGCC	1 cut(s)	449
EheI	GGCGCC	1 cut(s)	449
Esp3I	CGTCTC	1 cut(s)	104
FaeI	CATG	3 cut(s)	219, 758, 1012
FaqI	GGGAC	2 cut(s)	409, 607
FatI	CATG	3 cut(s)	215, 754, 1008
FauI	CCCGC	3 cut(s)	134, 138, 146
FblI	GTMKAC	1 cut(s)	863
Fnu4HI	GCNGC	1 cut(s)	765
FokI	GGATG	1 cut(s)	557
FriOI	GRGCYC	1 cut(s)	910
Fsp4HI	GCNGC	1 cut(s)	765
FspBI	CTAG	1 cut(s)	717
GlaI	GCGC	3 cut(s)	449, 615, 763
GluI	GCNGC	1 cut(s)	765
GsaI	CCCAGC	1 cut(s)	396
GsuI	CTGGAG	1 cut(s)	624
HaeII	RGCGCY	1 cut(s)	451
HaeIII	GGCC	3 cut(s)	252, 781, 892
HapII	CCGG	2 cut(s)	360, 591
HgaI	GACGC	1 cut(s)	117
HhaI	GCGC	3 cut(s)	450, 616, 764
Hin1I	GRCGYC	2 cut(s)	109, 448
Hin1II	CATG	3 cut(s)	219, 758, 1012
Hin6I	GCGC	3 cut(s)	448, 614, 762
HinP1I	GCGC	3 cut(s)	448, 614, 762
HpaII	CCGG	2 cut(s)	360, 591
Hpy166II	GTNNAC	2 cut(s)	864, 957
Hpy188I	TCNGA	7 cut(s)	89, 104, 410, 628, 845, 899, 1023
Hpy188III	TCNNGA	5 cut(s)	161, 482, 506, 573, 603
Hpy8I	GTNNAC	2 cut(s)	864, 957
Hpy99I	CGWCG	3 cut(s)	10, 108, 111
HpyAV	CCTTC	7 cut(s)	38, 144, 361, 436, 521, 741, 798
HpyCH4III	ACNGT	1 cut(s)	352
HpyCH4IV	ACGT	1 cut(s)	375
HpyCH4V	TGCA	3 cut(s)	271, 772, 913
HpyF10VI	GCNNNNNNNGC	6 cut(s)	117, 126, 225, 755, 764, 778
HpyF3I	CTNAG	5 cut(s)	180, 504, 627, 896, 1020
HpySE526I	ACGT	1 cut(s)	375
Hsp92I	GRCGYC	2 cut(s)	109, 448
Hsp92II	CATG	3 cut(s)	219, 758, 1012
HspAI	GCGC	3 cut(s)	448, 614, 762
KasI	GGCGCC	1 cut(s)	447
Kzo9I	GATC	1 cut(s)	343
LmnI	GCTCC	1 cut(s)	16
Lsp1109I	GCAGC	1 cut(s)	776
LweI	GCATC	1 cut(s)	843
MaeI	CTAG	1 cut(s)	717
MaeII	ACGT	1 cut(s)	375
MaeIII	GTNAC	1 cut(s)	647
MalI	GATC	1 cut(s)	345
MbiI	CCGCTC	1 cut(s)	238
MboI	GATC	1 cut(s)	343
MboII	GAAGA	3 cut(s)	500, 947, 950
MflI	RGATCY	1 cut(s)	343
MhlI	GDGCHC	2 cut(s)	179, 910
MluCI	AATT	3 cut(s)	76, 83, 454
Mly113I	GGCGCC	1 cut(s)	448
MmeI	TCCRAC	2 cut(s)	127, 823
MseI	TTAA	6 cut(s)	264, 459, 495, 516, 660, 929
MspA1I	CMGCKG	2 cut(s)	392, 524
MspI	CCGG	2 cut(s)	360, 591
MspR9I	CCNGG	5 cut(s)	258, 361, 477, 592, 880
MvaI	CCWGG	3 cut(s)	258, 477, 880
MvnI	CGCG	1 cut(s)	614
MwoI	GCNNNNNNNGC	6 cut(s)	117, 126, 225, 755, 764, 778
NarI	GGCGCC	1 cut(s)	448
NciI	CCSGG	2 cut(s)	361, 592
NdeII	GATC	1 cut(s)	343
NlaIII	CATG	3 cut(s)	219, 758, 1012
NlaIV	GGNNCC	6 cut(s)	12, 121, 397, 449, 595, 847
NspI	RCATGY	1 cut(s)	219
PaeI	GCATGC	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	3 cut(s)	14, 103, 820
PfoI	TCCNGGA	1 cut(s)	590
PkrI	GCNGC	1 cut(s)	766
PluTI	GGCGCC	1 cut(s)	451
PpuMI	RGGWCCY	1 cut(s)	594
Psp5II	RGGWCCY	1 cut(s)	594
Psp6I	CCWGG	3 cut(s)	256, 475, 878
PspFI	CCCAGC	1 cut(s)	392
PspGI	CCWGG	3 cut(s)	256, 475, 878
PspN4I	GGNNCC	6 cut(s)	12, 121, 397, 449, 595, 847
PspPI	GGNCC	4 cut(s)	251, 396, 594, 780
PspPPI	RGGWCCY	1 cut(s)	594
PsrI	GAACNNNNNNTAC	2 cut(s)	225, 257
PstI	CTGCAG	1 cut(s)	915
PsuI	RGATCY	1 cut(s)	343
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	2 cut(s)	374, 958
RsaNI	GTAC	2 cut(s)	373, 957
SaqAI	TTAA	6 cut(s)	264, 459, 495, 516, 660, 929
SatI	GCNGC	1 cut(s)	765
Sau3AI	GATC	1 cut(s)	343
Sau96I	GGNCC	4 cut(s)	251, 396, 594, 780
ScrFI	CCNGG	5 cut(s)	258, 361, 477, 592, 880
SduI	GDGCHC	2 cut(s)	179, 910
SfaNI	GCATC	1 cut(s)	843
SfcI	CTRYAG	2 cut(s)	911, 919
SfoI	GGCGCC	1 cut(s)	449
SinI	GGWCC	2 cut(s)	396, 594
SmlI	CTYRAG	1 cut(s)	982
SmoI	CTYRAG	1 cut(s)	982
SphI	GCATGC	1 cut(s)	219
Sse9I	AATT	3 cut(s)	76, 83, 454
SsiI	CCGC	8 cut(s)	123, 127, 131, 139, 236, 463, 522, 859
SspDI	GGCGCC	1 cut(s)	447
SspMI	CTAG	1 cut(s)	717
StyD4I	CCNGG	5 cut(s)	256, 359, 475, 590, 878
TaaI	ACNGT	1 cut(s)	352
TaiI	ACGT	1 cut(s)	378
TaqI	TCGA	1 cut(s)	173
TaqII	GACCGA	1 cut(s)	413
TasI	AATT	3 cut(s)	76, 83, 454
TatI	WGTACW	1 cut(s)	956
Tru1I	TTAA	6 cut(s)	264, 459, 495, 516, 660, 929
Tru9I	TTAA	6 cut(s)	264, 459, 495, 516, 660, 929
TscAI	CASTG	4 cut(s)	121, 184, 472, 650
TseI	GCWGC	1 cut(s)	764
TspDTI	ATGAA	5 cut(s)	246, 450, 501, 858, 994
TspGWI	ACGGA	2 cut(s)	259, 947
TspRI	CASTG	4 cut(s)	121, 184, 472, 650
VpaK11BI	GGWCC	2 cut(s)	396, 594
XapI	RAATTY	1 cut(s)	454
XceI	RCATGY	1 cut(s)	219
XmiI	GTMKAC	1 cut(s)	863
XspI	CTAG	1 cut(s)	717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.