Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002821

Physical Location & Seq

Genomic Coordinates Forward (+)

56192446 .. 56195753

Gene Structure 3308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0470500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGATCCCCAAAACCCAATGCCTTTGAAAACCCACTTGGTCTCCTCCACCGATTCCCCCGAGTTCACTCACCTAACCACCTCCCTGACTCGCTCCACCATCATTGCCCTCGACGCCGAGTGGAAGCCCCTCCGCTCCCACCACCCCACTTACCCAACCGTCTCTCTCCTCCAACTCGCCTGCCAACTCGGCCACGAACTCGCCGCCGGCGACGACTCGGTCGTCGTCTTCCTGCTCGACTTGGCCTCCGTCCCTCTGCCTTCAATATGGGTTCTGCTGAGGGATGCGTTTGTGAACCCGGATGTTCTGAAACTTGGTTTCAGGTTTAAGCAGGATTTGGTTTACTTGTCGTCCACTTTCAGCTCTCAGGGTTGTGATCCTGGGTTTGATAGGGTGGAGCCATATTTGGATATTACGAGCATATACCAGCATCTGCAACAGAAGCAACATGGGAAGAAGACACCAAAGGAAACCAAGAGTTTGGCAACTATCTGCAAAGAACTCCTTGGCATTTCTCTTTCAAAGGAACTACAATGTAGTGATTGGTCATGTCGCCCTCTTACAGAAGAGCAGAAAACATATGCAGCTATGGATGCACATTGCTTGCTTGAAATATTCAATGTCTTCCGAGTGAAAGTCATTAGGGAAGGGATCTTAGTTCACTCGCCTTCTGAACCACATCCCGCCATTGTGAACCTTGGGTTGAAACAAGTTCTTGAGAAGCTTGATATATGTAATAAAGTTGTAAGGATGAAATTTTGTGAAGCCGTAGATATGGTCCGAGCGACTGATGTTTCTAATGATATAACTACTGTAGAGGGAACAACTATTATGACACAGCATAGGAATACCCAGCCTATGGATGAATTTCTCTTGAAGGTTGTAAGCAGATATGGGGAAAAGATTTTATTGGGAGAATCTGATAAGAAAGCCAAAGCTAGCAAAAGAAAAGGCAAAAGACGGTCATCAGTGGGTTTCAAGCAAGGACATTATTTTGATGATTGGAAAGGTCCCGCACCATGGGATTTGACTGTAGGGGGTGATGGACATCCGAAGTTTTTATGTGATGTGATGGTCGAAGGCTTAGCTAAACATTTAAGATGCGTTGGGATCGATGCTGCAAGCCCATATTCGAAAAAGCCTGAATCCAGGGAATTAATAGATCATGCAAATAGAGAGAATAGAGTGCTCTTGACGCGGGATGCTAAGCTACTTAGATACGAGTATCTAATCAAAAATCAAATATATAGGGTGAAGAGTCTTCTCAAGAATGAACAACTACTTGAGGTAATTGAAACTTTCCAACTGAAAGTTAGTGAAGATCAGCTGATGTCAAGATGCACCAGATGCAATGGTAGGTTTATTCAAAAGCCCTTGACGACTGAAGAAGCTGTGGAAGCTGCAAAAGGTTTCCAAAGAATCCCCAACTGCTTGTTTGATAAGAATCTACAGTTTTGGCAATGCATGGACTGCAACCAGCTTTACTGGGAGGGAACTCAGTACCACAATGCAGTTCAGAAGTTCATTGATGTCTGCAAGTTGAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0010287 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_11

Protein Analysis

516

Amino Acids

58.76

Weight (kDa)

8.05

Isoelectric Point (pI)

37.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol_A_exo1	PF01612	16 - 213	3.1e-22	3'-5' exonuclease
Mut7-C	PF01927	351 - 507	2.9e-39	Mut7-C RNAse domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41040
fragaria_vesca	FvH4_1g01890 FvH4_1g01891 FvH4_1g01891 FvH4_1g01891
malus_domestica	MD02G1016900.v1.1 MD15G1161300.v1.1 MD15G1161400.v1.1
prunus_persica	Prupe.7G256500_v2.0.a1
pyrus_communis	pycom02g01520 pycom15g14510
rosa_chinensis	RchiOBHm_Chr2g0086891 RchiOBHm_Chr2g0086901
rosa_laevigata	RLG00000015811 RLG00000015812 RLG00000015813 RLG00000015814
rosa_multiflora	Rmu_sc0009060.1_g000008 Rmu_sc0009060.1_g000009 Rmu_sc0009188.1_g000001 Rmu_sc0009188.1_g000003
rosa_roxburghii	Rroxscaffold_2G00154040 Rroxscaffold_2G00154050
rosa_rugosa	Rorug01G0470400 Rorug01G0470500
rosa_samantha	Rh2AG023200 Rh2AG023300 Rh2BG023700 Rh2BG023900 Rh2BG024000 Rh2CG024000 Rh2CG024100 Rh2CG024200 Rh2DG023600 Rh2DG024000 Rh2DG024100
rosa_wichuraiana	Rw2G001820 Rw2G001830 Rw2G001840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	218, 221
AccB7I	CCANNNNNTGG	1 cut(s)	859
AccBSI	CCGCTC	1 cut(s)	135
AccII	CGCG	1 cut(s)	1198
AciI	CCGC	5 cut(s)	133, 204, 684, 1014, 1198
AclWI	GGATC	4 cut(s)	12, 371, 659, 1118
AcoI	YGGCCR	1 cut(s)	190
AcsI	RAATTY	2 cut(s)	755, 866
AcuI	CTGAAG	1 cut(s)	1404
AcyI	GRCGYC	1 cut(s)	114
AfaI	GTAC	1 cut(s)	1502
AfiI	CCNNNNNNNGG	2 cut(s)	859, 1020
AjnI	CCWGG	2 cut(s)	379, 1148
AjuI	GAANNNNNNNTTGG	2 cut(s)	20, 52
Alw21I	GWGCWC	1 cut(s)	1191
Alw26I	GTCTC	2 cut(s)	46, 166
AlwI	GGATC	4 cut(s)	12, 371, 659, 1118
AlwNI	CAGNNNCTG	1 cut(s)	433
Ama87I	CYCGRG	1 cut(s)	59
AoxI	GGCC	2 cut(s)	190, 243
ApeKI	GCWGC	3 cut(s)	584, 1118, 1400
ApoI	RAATTY	2 cut(s)	755, 866
AseI	ATTAAT	1 cut(s)	1157
AspS9I	GGNCC	2 cut(s)	778, 1010
AsuC2I	CCSGG	1 cut(s)	299
AsuHPI	GGTGA	3 cut(s)	62, 1052, 1264
AsuII	TTCGAA	1 cut(s)	1133
AsuNHI	GCTAGC	1 cut(s)	938
AvaI	CYCGRG	1 cut(s)	59
AvaII	GGWCC	2 cut(s)	778, 1010
BamHI	GGATCC	1 cut(s)	4
BbsI	GAAGAC	4 cut(s)	220, 464, 616, 1253
Bbv12I	GWGCWC	1 cut(s)	1191
BbvCI	CCTCAGC	1 cut(s)	278
BbvI	GCAGC	3 cut(s)	596, 1105, 1387
BccI	CCATC	3 cut(s)	107, 1037, 1066
BceAI	ACGGC	1 cut(s)	752
BciT130I	CCWGG	2 cut(s)	381, 1150
BcnI	CCSGG	1 cut(s)	299
BcoDI	GTCTC	2 cut(s)	46, 166
BfaI	CTAG	1 cut(s)	939
BfmI	CTRYAG	3 cut(s)	813, 1032, 1448
BglI	GCCNNNNNGGC	1 cut(s)	189
BisI	GCNGC	4 cut(s)	204, 585, 1119, 1401
BlpI	GCTNAGC	2 cut(s)	1084, 1206
BlsI	GCNGC	4 cut(s)	205, 586, 1120, 1402
Bme1390I	CCNGG	3 cut(s)	299, 381, 1150
Bme18I	GGWCC	2 cut(s)	778, 1010
BmeT110I	CYCGRG	1 cut(s)	59
BmgT120I	GGNCC	2 cut(s)	778, 1010
BmiI	GGNNCC	3 cut(s)	6, 399, 1012
BmrFI	CCNGG	3 cut(s)	299, 381, 1150
BmrI	ACTGGG	1 cut(s)	1495
BmsI	GCATC	8 cut(s)	274, 439, 583, 1091, 1105, 1192, 1328, 1337
BmtI	GCTAGC	1 cut(s)	942
BmuI	ACTGGG	1 cut(s)	1495
BpiI	GAAGAC	4 cut(s)	220, 464, 616, 1253
Bpu10I	CCTNAGC	1 cut(s)	278
Bpu1102I	GCTNAGC	2 cut(s)	1084, 1206
Bpu14I	TTCGAA	1 cut(s)	1133
BpuEI	CTTGAG	3 cut(s)	737, 1250, 1304
BpuMI	CCSGG	1 cut(s)	299
Bsa29I	ATCGAT	1 cut(s)	1113
BsaBI	GATNNNNATC	2 cut(s)	1047, 1443
BsaHI	GRCGYC	1 cut(s)	114
BsaI	GGTCTC	1 cut(s)	46
BsaJI	CCNNGG	5 cut(s)	380, 505, 697, 1019, 1149
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 230, 260
Bsc4I	CCNNNNNNNGG	2 cut(s)	859, 1020
Bse118I	RCCGGY	1 cut(s)	206
Bse1I	ACTGG	1 cut(s)	1490
Bse3DI	GCAATG	4 cut(s)	102, 598, 1357, 1466
Bse8I	GATNNNNATC	2 cut(s)	1047, 1443
BseBI	CCWGG	2 cut(s)	381, 1150
BseCI	ATCGAT	1 cut(s)	1113
BseDI	CCNNGG	5 cut(s)	380, 505, 697, 1019, 1149
BseGI	GGATG	8 cut(s)	289, 307, 598, 679, 756, 868, 1048, 1207
BseJI	GATNNNNATC	2 cut(s)	1047, 1443
BseLI	CCNNNNNNNGG	2 cut(s)	859, 1020
BseMI	GCAATG	4 cut(s)	102, 598, 1357, 1466
BseMII	CTCAG	3 cut(s)	269, 380, 1511
BseNI	ACTGG	1 cut(s)	1490
BseRI	GAGGAG	2 cut(s)	34, 158
BseXI	GCAGC	3 cut(s)	596, 1105, 1387
BseYI	CCCAGC	1 cut(s)	852
Bsh1236I	CGCG	1 cut(s)	1198
Bsh1285I	CGRYCG	1 cut(s)	222
BshFI	GGCC	2 cut(s)	192, 245
BshVI	ATCGAT	1 cut(s)	1113
BsiEI	CGRYCG	1 cut(s)	222
BsiHKAI	GWGCWC	1 cut(s)	1191
BsiHKCI	CYCGRG	1 cut(s)	59
BsiSI	CCGG	2 cut(s)	207, 299
BslFI	GGGAC	2 cut(s)	236, 996
BslI	CCNNNNNNNGG	2 cut(s)	859, 1020
BsmAI	GTCTC	2 cut(s)	46, 166
BsmBI	CGTCTC	1 cut(s)	166
BsmFI	GGGAC	2 cut(s)	236, 996
BsnI	GGCC	2 cut(s)	192, 245
Bso31I	GGTCTC	1 cut(s)	46
BsoBI	CYCGRG	1 cut(s)	59
Bsp119I	TTCGAA	1 cut(s)	1133
Bsp1286I	GDGCHC	1 cut(s)	1191
Bsp143I	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
Bsp1720I	GCTNAGC	2 cut(s)	1084, 1206
Bsp19I	CCATGG	1 cut(s)	1019
BspACI	CCGC	5 cut(s)	133, 204, 684, 1014, 1198
BspANI	GGCC	2 cut(s)	192, 245
BspCNI	CTCAG	3 cut(s)	270, 379, 1510
BspDI	ATCGAT	1 cut(s)	1113
BspFNI	CGCG	1 cut(s)	1198
BspLI	GGNNCC	3 cut(s)	6, 399, 1012
BspOI	GCTAGC	1 cut(s)	942
BspPI	GGATC	4 cut(s)	12, 371, 659, 1118
BspQI	GCTCTTC	1 cut(s)	561
BspT104I	TTCGAA	1 cut(s)	1133
BspTNI	GGTCTC	1 cut(s)	46
BsrBI	CCGCTC	1 cut(s)	135
BsrDI	GCAATG	4 cut(s)	102, 598, 1357, 1466
BsrFI	RCCGGY	1 cut(s)	206
BsrI	ACTGG	1 cut(s)	1490
BssAI	RCCGGY	1 cut(s)	206
BssECI	CCNNGG	5 cut(s)	380, 505, 697, 1019, 1149
BssMI	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
BssNI	GRCGYC	1 cut(s)	114
BssT1I	CCWWGG	3 cut(s)	505, 697, 1019
Bst2UI	CCWGG	2 cut(s)	381, 1150
Bst4CI	ACNGT	5 cut(s)	160, 814, 963, 1033, 1452
Bst6I	CTCTTC	2 cut(s)	561, 1250
BstACI	GRCGYC	1 cut(s)	114
BstAPI	GCANNNNNTGC	2 cut(s)	1347, 1470
BstBI	TTCGAA	1 cut(s)	1133
BstC8I	GCNNGC	5 cut(s)	181, 208, 605, 940, 1123
BstDEI	CTNAG	7 cut(s)	278, 366, 655, 1084, 1206, 1214, 1497
BstDSI	CCRYGG	1 cut(s)	1019
BstF5I	GGATG	8 cut(s)	289, 307, 598, 679, 756, 868, 1048, 1207
BstFNI	CGCG	1 cut(s)	1198
BstKTI	GATC	6 cut(s)	7, 379, 654, 1113, 1165, 1324
BstMAI	GTCTC	2 cut(s)	46, 166
BstMBI	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
BstMCI	CGRYCG	1 cut(s)	222
BstMWI	GCNNNNNNNGC	8 cut(s)	113, 189, 442, 593, 1195, 1347, 1397, 1470
BstNI	CCWGG	2 cut(s)	381, 1150
BstSCI	CCNGG	3 cut(s)	297, 379, 1148
BstSFI	CTRYAG	3 cut(s)	813, 1032, 1448
BstUI	CGCG	1 cut(s)	1198
BstV1I	GCAGC	3 cut(s)	596, 1105, 1387
BstV2I	GAAGAC	4 cut(s)	220, 464, 616, 1253
BstX2I	RGATCY	2 cut(s)	4, 651
BstXI	CCANNNNNNTGG	1 cut(s)	481
BstYI	RGATCY	2 cut(s)	4, 651
Bsu15I	ATCGAT	1 cut(s)	1113
BsuRI	GGCC	2 cut(s)	192, 245
BsuTUI	ATCGAT	1 cut(s)	1113
BtgI	CCRYGG	1 cut(s)	1019
BtsCI	GGATG	8 cut(s)	289, 307, 598, 679, 756, 868, 1048, 1207
BtsIMutI	CAGTG	1 cut(s)	975
Cac8I	GCNNGC	5 cut(s)	181, 208, 605, 940, 1123
CaiI	CAGNNNCTG	1 cut(s)	433
Cfr10I	RCCGGY	1 cut(s)	206
Cfr13I	GGNCC	2 cut(s)	778, 1010
ClaI	ATCGAT	1 cut(s)	1113
CseI	GACGC	2 cut(s)	122, 1204
Csp6I	GTAC	1 cut(s)	1501
CspCI	CAANNNNNGTGG	2 cut(s)	85, 120
CviAII	CATG	5 cut(s)	449, 549, 1020, 1166, 1465
CviQI	GTAC	1 cut(s)	1501
DdeI	CTNAG	7 cut(s)	278, 366, 655, 1084, 1206, 1214, 1497
DpnI	GATC	6 cut(s)	6, 378, 653, 1112, 1164, 1323
DpnII	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
DrdI	GACNNNNNNGTC	2 cut(s)	218, 221
DseDI	GACNNNNNNGTC	2 cut(s)	218, 221
EaeI	YGGCCR	1 cut(s)	190
Eam1104I	CTCTTC	2 cut(s)	561, 1250
EarI	CTCTTC	2 cut(s)	561, 1250
Eco130I	CCWWGG	3 cut(s)	505, 697, 1019
Eco31I	GGTCTC	1 cut(s)	46
Eco47I	GGWCC	2 cut(s)	778, 1010
Eco57I	CTGAAG	1 cut(s)	1404
Eco88I	CYCGRG	1 cut(s)	59
EcoO109I	RGGNCCY	1 cut(s)	1010
EcoRII	CCWGG	2 cut(s)	379, 1148
EcoT14I	CCWWGG	3 cut(s)	505, 697, 1019
EcoT22I	ATGCAT	1 cut(s)	1466
ErhI	CCWWGG	3 cut(s)	505, 697, 1019
Esp3I	CGTCTC	1 cut(s)	166
FaeI	CATG	5 cut(s)	452, 552, 1023, 1169, 1468
FalI	AAGNNNNNCTT	2 cut(s)	489, 521
FaqI	GGGAC	2 cut(s)	236, 996
FatI	CATG	5 cut(s)	448, 548, 1019, 1165, 1464
FauI	CCCGC	3 cut(s)	691, 1021, 1191
FauNDI	CATATG	1 cut(s)	580
Fnu4HI	GCNGC	4 cut(s)	204, 585, 1119, 1401
FokI	GGATG	8 cut(s)	296, 314, 605, 666, 763, 875, 1035, 1214
Fsp4HI	GCNGC	4 cut(s)	204, 585, 1119, 1401
FspBI	CTAG	1 cut(s)	939
GluI	GCNGC	4 cut(s)	204, 585, 1119, 1401
GsaI	CCCAGC	1 cut(s)	856
HaeIII	GGCC	2 cut(s)	192, 245
HapII	CCGG	2 cut(s)	207, 299
HgaI	GACGC	2 cut(s)	122, 1204
Hin1I	GRCGYC	1 cut(s)	114
Hin1II	CATG	5 cut(s)	452, 552, 1023, 1169, 1468
HindIII	AAGCTT	1 cut(s)	722
HinfI	GANTC	8 cut(s)	53, 88, 215, 917, 1145, 1258, 1419, 1444
HpaII	CCGG	2 cut(s)	207, 299
HphI	GGTGA	3 cut(s)	62, 1052, 1264
Hpy166II	GTNNAC	6 cut(s)	66, 295, 343, 354, 661, 694
Hpy188I	TCNGA	7 cut(s)	309, 629, 673, 782, 922, 1053, 1518
Hpy188III	TCNNGA	5 cut(s)	716, 874, 1192, 1267, 1335
Hpy8I	GTNNAC	6 cut(s)	66, 295, 343, 354, 661, 694
Hpy99I	CGWCG	3 cut(s)	116, 215, 227
HpyAV	CCTTC	5 cut(s)	270, 641, 678, 871, 1073
HpyCH4III	ACNGT	5 cut(s)	160, 814, 963, 1033, 1452
HpyF10VI	GCNNNNNNNGC	8 cut(s)	113, 189, 442, 593, 1195, 1347, 1397, 1470
HpyF3I	CTNAG	7 cut(s)	278, 366, 655, 1084, 1206, 1214, 1497
Hsp92I	GRCGYC	1 cut(s)	114
Hsp92II	CATG	5 cut(s)	452, 552, 1023, 1169, 1468
KroI	GCCGGC	1 cut(s)	206
KroNI	GCCGGC	1 cut(s)	208
Kzo9I	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
LguI	GCTCTTC	1 cut(s)	561
LmnI	GCTCC	3 cut(s)	98, 140, 397
Lsp1109I	GCAGC	3 cut(s)	596, 1105, 1387
LweI	GCATC	8 cut(s)	274, 439, 583, 1091, 1105, 1192, 1328, 1337
MaeI	CTAG	1 cut(s)	939
MalI	GATC	6 cut(s)	6, 378, 653, 1112, 1164, 1323
MbiI	CCGCTC	1 cut(s)	135
MboI	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
MboII	GAAGA	9 cut(s)	220, 466, 469, 578, 616, 1253, 1267, 1331, 1397
MflI	RGATCY	2 cut(s)	4, 651
MhlI	GDGCHC	1 cut(s)	1191
MluCI	AATT	4 cut(s)	755, 866, 1154, 1290
MlyI	GAGTC	3 cut(s)	82, 209, 1267
MmeI	TCCRAC	2 cut(s)	196, 1327
Mph1103I	ATGCAT	1 cut(s)	1466
MreI	CGCCGGCG	1 cut(s)	206
MroNI	GCCGGC	1 cut(s)	206
MseI	TTAA	3 cut(s)	327, 1097, 1157
MspA1I	CMGCKG	1 cut(s)	1327
MspI	CCGG	2 cut(s)	207, 299
MspR9I	CCNGG	3 cut(s)	299, 381, 1150
MvaI	CCWGG	2 cut(s)	381, 1150
MvnI	CGCG	1 cut(s)	1198
MwoI	GCNNNNNNNGC	8 cut(s)	113, 189, 442, 593, 1195, 1347, 1397, 1470
NaeI	GCCGGC	1 cut(s)	208
NciI	CCSGG	1 cut(s)	299
NcoI	CCATGG	1 cut(s)	1019
NdeI	CATATG	1 cut(s)	580
NdeII	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
NgoMIV	GCCGGC	1 cut(s)	206
NheI	GCTAGC	1 cut(s)	938
NlaIII	CATG	5 cut(s)	452, 552, 1023, 1169, 1468
NlaIV	GGNNCC	3 cut(s)	6, 399, 1012
NmeAIII	GCCGAG	2 cut(s)	142, 168
NsiI	ATGCAT	1 cut(s)	1466
NspV	TTCGAA	1 cut(s)	1133
PciSI	GCTCTTC	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	2 cut(s)	207, 219
PdiI	GCCGGC	1 cut(s)	208
PfeI	GAWTC	5 cut(s)	53, 917, 1145, 1419, 1444
PflFI	GACNNNGTC	1 cut(s)	218
PflMI	CCANNNNNTGG	1 cut(s)	859
PkrI	GCNGC	4 cut(s)	205, 586, 1120, 1402
PleI	GAGTC	3 cut(s)	82, 209, 1266
PpsI	GAGTC	3 cut(s)	82, 209, 1266
PpuMI	RGGWCCY	1 cut(s)	1010
PshBI	ATTAAT	1 cut(s)	1157
Psp5II	RGGWCCY	1 cut(s)	1010
Psp6I	CCWGG	2 cut(s)	379, 1148
PspFI	CCCAGC	1 cut(s)	852
PspGI	CCWGG	2 cut(s)	379, 1148
PspN4I	GGNNCC	3 cut(s)	6, 399, 1012
PspPI	GGNCC	2 cut(s)	778, 1010
PspPPI	RGGWCCY	1 cut(s)	1010
PstNI	CAGNNNCTG	1 cut(s)	433
PsuI	RGATCY	2 cut(s)	4, 651
PsyI	GACNNNGTC	1 cut(s)	218
PvuII	CAGCTG	1 cut(s)	1327
RsaI	GTAC	1 cut(s)	1502
RsaNI	GTAC	1 cut(s)	1501
SapI	GCTCTTC	1 cut(s)	561
SaqAI	TTAA	3 cut(s)	327, 1097, 1157
SatI	GCNGC	4 cut(s)	204, 585, 1119, 1401
Sau3AI	GATC	6 cut(s)	4, 376, 651, 1110, 1162, 1321
Sau96I	GGNCC	2 cut(s)	778, 1010
SchI	GAGTC	3 cut(s)	82, 209, 1267
ScrFI	CCNGG	3 cut(s)	299, 381, 1150
SduI	GDGCHC	1 cut(s)	1191
SfaNI	GCATC	8 cut(s)	274, 439, 583, 1091, 1105, 1192, 1328, 1337
SfcI	CTRYAG	3 cut(s)	813, 1032, 1448
SfuI	TTCGAA	1 cut(s)	1133
SgrAI	CRCCGGYG	1 cut(s)	206
SinI	GGWCC	2 cut(s)	778, 1010
SmlI	CTYRAG	3 cut(s)	716, 1265, 1283
SmoI	CTYRAG	3 cut(s)	716, 1265, 1283
Sse9I	AATT	4 cut(s)	755, 866, 1154, 1290
SsiI	CCGC	5 cut(s)	133, 204, 684, 1014, 1198
SspI	AATATT	1 cut(s)	615
SspMI	CTAG	1 cut(s)	939
StyD4I	CCNGG	3 cut(s)	297, 379, 1148
StyI	CCWWGG	3 cut(s)	505, 697, 1019
TaaI	ACNGT	5 cut(s)	160, 814, 963, 1033, 1452
TaqI	TCGA	5 cut(s)	111, 237, 1077, 1113, 1133
TaqII	GACCGA	1 cut(s)	208
TasI	AATT	4 cut(s)	755, 866, 1154, 1290
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	5 cut(s)	53, 917, 1145, 1419, 1444
Tru1I	TTAA	3 cut(s)	327, 1097, 1157
Tru9I	TTAA	3 cut(s)	327, 1097, 1157
TscAI	CASTG	1 cut(s)	975
TseI	GCWGC	3 cut(s)	584, 1118, 1400
TspDTI	ATGAA	4 cut(s)	767, 879, 1287, 1513
TspGWI	ACGGA	1 cut(s)	238
TspRI	CASTG	1 cut(s)	975
Tth111I	GACNNNGTC	1 cut(s)	218
Van91I	CCANNNNNTGG	1 cut(s)	859
VpaK11BI	GGWCC	2 cut(s)	778, 1010
VspI	ATTAAT	1 cut(s)	1157
XapI	RAATTY	2 cut(s)	755, 866
XspI	CTAG	1 cut(s)	939
Zsp2I	ATGCAT	1 cut(s)	1466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.