Prupe.7G258500_v2.0.a1

Glyco_18

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21573463 .. 21575070
1608 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G258500.1

Sequence Viewer

Length: 1143 bp
ATGTCTTCGAAAACCAAAACCCTTCAAATATTTCTCCTTTCCACCCTCCTTTTCCTTATCCAATTCAATGTCTCTTCCGGCCAAACTGTGGTTAAAGGCGCTTACTGGTATTGGGACAGCGGATTTCCAGCATCCAGCATAGATTCCAGCCTTTTCACTAATCTTTTCTGTGCATTTGCTGATCTTGATCCCAATACTTACCAAGTCACCGTTACTTCCTCAAACTCAGCCCAATTCTCGAGCTTCACACAAACAGTCCAACAAAAAAACCCTTCTGTGAAAACCCTCTTGTCCATTGGTGGAGGAGGCAATGATACTATTGCAGACACCTTTGCTTCAATGGCAAGCCAACCCAGCAGGCGAAAATCATTCATTGACTCCTCCATTAACTTAGCCAGGTCCTACAACTTCCATGGTATTGACCTTGATTGGGAGTACCCGGACACCACCACTCACATGACCAACTTTGGCACCCTTCTCACTGAGCTGCGAGCTGCTGTGGCCAATGAGTCCCAGACATCTGGCAACACCGAATTGCTTTTAGCCGCTGCAGTATTTCGCTCTGCAGATTACTATACCATAAATTACCCCATTGAGTCCATATCAAACAGTTTGGACTGGATCAATGTAATGGCTTATGACTTCTATGGCTCTGCTTGGAACTCAAGCAGAGACAGAACTGGACCACCGGCTGCATTATACAACGCAACCGCTAGCCAGGTTAATGGGGATGCTGGCATCACATCTTGGGTTGAGGCAGGTTTGGGTGCGGATAAGATAGCGCTGGGCCTTCCATTTTATGGGTATGCATGGCGTTTGCTGAATGCTGATGAGCATGGCCTTTTTGCTCCGGCTGATGGACCGGCTGATGGACCGGCTATTAGGACAGATGGGAGCATAAACTACAAGGACATACTGGACTTCATAAGCCAGAATGGGACACAGACAGTGTACAATGCGACGGTTGTTACAAACTACTGCTACTCTGGGACAACATGGATTGGCTATGACGACACACAGAGTATCTCTGCCAAGGTTTCATATGCTAAGCAAAAGGGGCTTCTTGGTTACTTCTCATGGCAAGTCAGTGGTGACGACAATAACTGGGCTCTTTCTCAAACAGCTTCAACTACTTGGGGATGA

Protein Analysis

381

Amino Acids

41.36

Weight (kDa)

4.51

Isoelectric Point (pI)

27.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 749
AccB1I GGYRCC 1 cut(s) 470
AccB7I CCANNNNNTGG 2 cut(s) 88, 800
AciI CCGC 4 cut(s) 120, 546, 711, 770
AclWI GGATC 2 cut(s) 182, 629
AcoI YGGCCR 2 cut(s) 79, 501
AfaI GTAC 2 cut(s) 437, 953
AfeI AGCGCT 1 cut(s) 783
AfiI CCNNNNNNNGG 5 cut(s) 88, 430, 800, 857, 869
AgsI TTSAA 4 cut(s) 26, 67, 339, 1128
AjnI CCWGG 2 cut(s) 395, 717
AluBI AGCT 4 cut(s) 243, 487, 494, 1124
AluI AGCT 4 cut(s) 243, 487, 494, 1124
Alw26I GTCTC 2 cut(s) 76, 666
AlwI GGATC 2 cut(s) 182, 629
Ama87I CYCGRG 1 cut(s) 238
Aor51HI AGCGCT 1 cut(s) 783
AoxI GGCC 4 cut(s) 79, 501, 787, 838
ApeKI GCWGC 4 cut(s) 487, 494, 548, 692
AspLEI GCGC 2 cut(s) 101, 784
AspS9I GGNCC 5 cut(s) 399, 683, 787, 860, 872
AsuC2I CCSGG 1 cut(s) 440
AsuHPI GGTGA 2 cut(s) 199, 1103
AsuII TTCGAA 1 cut(s) 8
AsuNHI GCTAGC 1 cut(s) 713
AvaI CYCGRG 1 cut(s) 238
AvaII GGWCC 4 cut(s) 399, 683, 860, 872
BalI TGGCCA 1 cut(s) 503
BanI GGYRCC 1 cut(s) 470
BanII GRGCYC 1 cut(s) 1111
BbvI GCAGC 4 cut(s) 474, 481, 535, 679
BccI CCATC 3 cut(s) 851, 863, 884
BciT130I CCWGG 2 cut(s) 397, 719
BcnI CCSGG 1 cut(s) 440
BcoDI GTCTC 2 cut(s) 76, 666
BfaI CTAG 1 cut(s) 714
BfmI CTRYAG 2 cut(s) 549, 564
BfoI RGCGCY 2 cut(s) 102, 785
BfuAI ACCTGC 1 cut(s) 749
BisI GCNGC 5 cut(s) 488, 495, 546, 549, 693
BlpI GCTNAGC 1 cut(s) 1047
BlsI GCNGC 5 cut(s) 489, 496, 547, 550, 694
Bme1390I CCNGG 3 cut(s) 397, 440, 719
Bme18I GGWCC 4 cut(s) 399, 683, 860, 872
BmeT110I CYCGRG 1 cut(s) 238
BmgT120I GGNCC 5 cut(s) 399, 683, 787, 860, 872
BmiI GGNNCC 1 cut(s) 472
BmrFI CCNGG 3 cut(s) 397, 440, 719
BmrI ACTGGG 1 cut(s) 1114
BmsI GCATC 3 cut(s) 140, 721, 747
BmtI GCTAGC 1 cut(s) 717
BmuI ACTGGG 1 cut(s) 1114
Bpu1102I GCTNAGC 1 cut(s) 1047
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 1 cut(s) 649
BpuMI CCSGG 1 cut(s) 440
BsaBI GATNNNNATC 1 cut(s) 186
BsaJI CCNNGG 2 cut(s) 412, 1032
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 430, 800, 857, 869
Bse118I RCCGGY 3 cut(s) 688, 862, 874
Bse1I ACTGG 5 cut(s) 110, 623, 685, 921, 1109
Bse3DI GCAATG 1 cut(s) 316
Bse8I GATNNNNATC 1 cut(s) 186
BseBI CCWGG 2 cut(s) 397, 719
BseDI CCNNGG 2 cut(s) 412, 1032
BseGI GGATG 2 cut(s) 131, 736
BseJI GATNNNNATC 1 cut(s) 186
BseLI CCNNNNNNNGG 5 cut(s) 88, 430, 800, 857, 869
BseMI GCAATG 1 cut(s) 316
BseMII CTCAG 2 cut(s) 240, 474
BseNI ACTGG 5 cut(s) 110, 623, 685, 921, 1109
BseRI GAGGAG 2 cut(s) 318, 370
BseXI GCAGC 4 cut(s) 474, 481, 535, 679
BseYI CCCAGC 2 cut(s) 353, 784
BshFI GGCC 4 cut(s) 81, 503, 789, 840
BshNI GGYRCC 1 cut(s) 470
BsiHKCI CYCGRG 1 cut(s) 238
BsiSI CCGG 6 cut(s) 78, 440, 689, 851, 863, 875
BslFI GGGAC 4 cut(s) 128, 496, 952, 1003
BslI CCNNNNNNNGG 5 cut(s) 88, 430, 800, 857, 869
BsmAI GTCTC 2 cut(s) 76, 666
BsmFI GGGAC 4 cut(s) 128, 496, 952, 1003
BsmI GAATGC 1 cut(s) 829
BsnI GGCC 4 cut(s) 81, 503, 789, 840
BsoBI CYCGRG 1 cut(s) 238
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 1 cut(s) 1111
Bsp1407I TGTACA 1 cut(s) 951
Bsp143I GATC 3 cut(s) 181, 187, 621
Bsp1720I GCTNAGC 1 cut(s) 1047
Bsp19I CCATGG 1 cut(s) 412
BspACI CCGC 4 cut(s) 120, 546, 711, 770
BspANI GGCC 4 cut(s) 81, 503, 789, 840
BspCNI CTCAG 2 cut(s) 239, 475
BspLI GGNNCC 1 cut(s) 472
BspMAI CTGCAG 2 cut(s) 553, 568
BspMI ACCTGC 1 cut(s) 749
BspOI GCTAGC 1 cut(s) 717
BspPI GGATC 2 cut(s) 182, 629
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 1 cut(s) 470
BsrDI GCAATG 1 cut(s) 316
BsrFI RCCGGY 3 cut(s) 688, 862, 874
BsrGI TGTACA 1 cut(s) 951
BsrI ACTGG 5 cut(s) 110, 623, 685, 921, 1109
BssAI RCCGGY 3 cut(s) 688, 862, 874
BssECI CCNNGG 2 cut(s) 412, 1032
BssMI GATC 3 cut(s) 181, 187, 621
BssT1I CCWWGG 2 cut(s) 412, 1032
Bst2UI CCWGG 2 cut(s) 397, 719
Bst4CI ACNGT 6 cut(s) 88, 211, 256, 611, 949, 964
Bst6I CTCTTC 1 cut(s) 79
BstAUI TGTACA 1 cut(s) 951
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 5 cut(s) 346, 359, 492, 715, 736
BstDEI CTNAG 4 cut(s) 226, 391, 483, 1047
BstDSI CCRYGG 1 cut(s) 412
BstF5I GGATG 2 cut(s) 131, 736
BstH2I RGCGCY 2 cut(s) 102, 785
BstHHI GCGC 2 cut(s) 101, 784
BstKTI GATC 3 cut(s) 184, 190, 624
BstMAI GTCTC 2 cut(s) 76, 666
BstMBI GATC 3 cut(s) 181, 187, 621
BstMWI GCNNNNNNNGC 4 cut(s) 341, 354, 500, 1057
BstNI CCWGG 2 cut(s) 397, 719
BstSCI CCNGG 3 cut(s) 395, 438, 717
BstSFI CTRYAG 2 cut(s) 549, 564
BstV1I GCAGC 4 cut(s) 474, 481, 535, 679
BstXI CCANNNNNNTGG 2 cut(s) 521, 725
BsuRI GGCC 4 cut(s) 81, 503, 789, 840
BtgI CCRYGG 1 cut(s) 412
BtsCI GGATG 2 cut(s) 131, 736
BtsIMutI CAGTG 3 cut(s) 480, 954, 1093
BveI ACCTGC 1 cut(s) 749
Cac8I GCNNGC 5 cut(s) 346, 359, 492, 715, 736
CfoI GCGC 2 cut(s) 101, 784
Cfr10I RCCGGY 3 cut(s) 688, 862, 874
Cfr13I GGNCC 5 cut(s) 399, 683, 787, 860, 872
Csp6I GTAC 2 cut(s) 436, 952
CviAII CATG 6 cut(s) 413, 457, 810, 836, 996, 1077
CviQI GTAC 2 cut(s) 436, 952
DdeI CTNAG 4 cut(s) 226, 391, 483, 1047
DpnI GATC 3 cut(s) 183, 189, 623
DpnII GATC 3 cut(s) 181, 187, 621
EaeI YGGCCR 2 cut(s) 79, 501
Eam1104I CTCTTC 1 cut(s) 79
EarI CTCTTC 1 cut(s) 79
Eco130I CCWWGG 2 cut(s) 412, 1032
Eco24I GRGCYC 1 cut(s) 1111
Eco47I GGWCC 4 cut(s) 399, 683, 860, 872
Eco47III AGCGCT 1 cut(s) 783
Eco88I CYCGRG 1 cut(s) 238
EcoO109I RGGNCCY 1 cut(s) 399
EcoRII CCWGG 2 cut(s) 395, 717
EcoT14I CCWWGG 2 cut(s) 412, 1032
EcoT22I ATGCAT 1 cut(s) 811
EcoT38I GRGCYC 1 cut(s) 1111
ErhI CCWWGG 2 cut(s) 412, 1032
FaeI CATG 6 cut(s) 416, 460, 813, 839, 999, 1080
FaqI GGGAC 4 cut(s) 128, 496, 952, 1003
FatI CATG 6 cut(s) 412, 456, 809, 835, 995, 1076
FauNDI CATATG 1 cut(s) 1042
Fnu4HI GCNGC 5 cut(s) 488, 495, 546, 549, 693
FokI GGATG 2 cut(s) 118, 743
FriOI GRGCYC 1 cut(s) 1111
Fsp4HI GCNGC 5 cut(s) 488, 495, 546, 549, 693
FspBI CTAG 1 cut(s) 714
GlaI GCGC 2 cut(s) 100, 783
GluI GCNGC 5 cut(s) 488, 495, 546, 549, 693
GsaI CCCAGC 2 cut(s) 357, 788
HaeII RGCGCY 2 cut(s) 102, 785
HaeIII GGCC 4 cut(s) 81, 503, 789, 840
HapII CCGG 6 cut(s) 78, 440, 689, 851, 863, 875
HhaI GCGC 2 cut(s) 101, 784
Hin1II CATG 6 cut(s) 416, 460, 813, 839, 999, 1080
Hin6I GCGC 2 cut(s) 99, 782
HinP1I GCGC 2 cut(s) 99, 782
HinfI GANTC 4 cut(s) 143, 377, 509, 596
HpaII CCGG 6 cut(s) 78, 440, 689, 851, 863, 875
HphI GGTGA 2 cut(s) 199, 1103
Hpy166II GTNNAC 1 cut(s) 952
Hpy188III TCNNGA 2 cut(s) 185, 238
Hpy8I GTNNAC 1 cut(s) 952
Hpy99I CGWCG 1 cut(s) 964
HpyAV CCTTC 4 cut(s) 32, 282, 485, 800
HpyCH4III ACNGT 6 cut(s) 88, 211, 256, 611, 949, 964
HpyCH4V TGCA 6 cut(s) 173, 323, 551, 566, 695, 809
HpyF10VI GCNNNNNNNGC 4 cut(s) 341, 354, 500, 1057
HpyF3I CTNAG 4 cut(s) 226, 391, 483, 1047
Hsp92II CATG 6 cut(s) 416, 460, 813, 839, 999, 1080
HspAI GCGC 2 cut(s) 99, 782
Kzo9I GATC 3 cut(s) 181, 187, 621
LmnI GCTCC 2 cut(s) 853, 894
Lsp1109I GCAGC 4 cut(s) 474, 481, 535, 679
LweI GCATC 3 cut(s) 140, 721, 747
MaeI CTAG 1 cut(s) 714
MaeIII GTNAC 5 cut(s) 205, 211, 967, 1067, 1091
MalI GATC 3 cut(s) 183, 189, 623
MboI GATC 3 cut(s) 181, 187, 621
MboII GAAGA 1 cut(s) 66
MhlI GDGCHC 1 cut(s) 1111
MlsI TGGCCA 1 cut(s) 503
MluCI AATT 4 cut(s) 62, 233, 533, 583
MluNI TGGCCA 1 cut(s) 503
MlyI GAGTC 3 cut(s) 371, 518, 605
MmeI TCCRAC 1 cut(s) 283
MnlI CCTC 7 cut(s) 56, 229, 296, 296, 299, 391, 748
Mox20I TGGCCA 1 cut(s) 503
Mph1103I ATGCAT 1 cut(s) 811
MscI TGGCCA 1 cut(s) 503
MseI TTAA 3 cut(s) 93, 387, 723
MslI CAYNNNNRTG 1 cut(s) 455
Msp20I TGGCCA 1 cut(s) 503
MspA1I CMGCKG 2 cut(s) 120, 548
MspI CCGG 6 cut(s) 78, 440, 689, 851, 863, 875
MspR9I CCNGG 3 cut(s) 397, 440, 719
Mva1269I GAATGC 1 cut(s) 829
MvaI CCWGG 2 cut(s) 397, 719
MwoI GCNNNNNNNGC 4 cut(s) 341, 354, 500, 1057
NciI CCSGG 1 cut(s) 440
NcoI CCATGG 1 cut(s) 412
NdeI CATATG 1 cut(s) 1042
NdeII GATC 3 cut(s) 181, 187, 621
NheI GCTAGC 1 cut(s) 713
NlaIII CATG 6 cut(s) 416, 460, 813, 839, 999, 1080
NlaIV GGNNCC 1 cut(s) 472
NmuCI GTSAC 2 cut(s) 205, 1091
NsiI ATGCAT 1 cut(s) 811
NspV TTCGAA 1 cut(s) 8
PaeR7I CTCGAG 1 cut(s) 238
PctI GAATGC 1 cut(s) 829
PfeI GAWTC 1 cut(s) 143
PflMI CCANNNNNTGG 2 cut(s) 88, 800
PkrI GCNGC 5 cut(s) 489, 496, 547, 550, 694
PleI GAGTC 3 cut(s) 371, 517, 604
PpsI GAGTC 3 cut(s) 371, 517, 604
PpuMI RGGWCCY 1 cut(s) 399
Psp5II RGGWCCY 1 cut(s) 399
Psp6I CCWGG 2 cut(s) 395, 717
PspFI CCCAGC 2 cut(s) 353, 784
PspGI CCWGG 2 cut(s) 395, 717
PspN4I GGNNCC 1 cut(s) 472
PspPI GGNCC 5 cut(s) 399, 683, 787, 860, 872
PspPPI RGGWCCY 1 cut(s) 399
PstI CTGCAG 2 cut(s) 553, 568
RsaI GTAC 2 cut(s) 437, 953
RsaNI GTAC 2 cut(s) 436, 952
RseI CAYNNNNRTG 1 cut(s) 455
SaqAI TTAA 3 cut(s) 93, 387, 723
SatI GCNGC 5 cut(s) 488, 495, 546, 549, 693
Sau3AI GATC 3 cut(s) 181, 187, 621
Sau96I GGNCC 5 cut(s) 399, 683, 787, 860, 872
SchI GAGTC 3 cut(s) 371, 518, 605
ScrFI CCNGG 3 cut(s) 397, 440, 719
SduI GDGCHC 1 cut(s) 1111
SfaNI GCATC 3 cut(s) 140, 721, 747
SfcI CTRYAG 2 cut(s) 549, 564
Sfr274I CTCGAG 1 cut(s) 238
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 4 cut(s) 399, 683, 860, 872
SlaI CTCGAG 1 cut(s) 238
SmiMI CAYNNNNRTG 1 cut(s) 455
SmlI CTYRAG 2 cut(s) 238, 664
SmoI CTYRAG 2 cut(s) 238, 664
Sse9I AATT 4 cut(s) 62, 233, 533, 583
SsiI CCGC 4 cut(s) 120, 546, 711, 770
SspI AATATT 1 cut(s) 30
SspMI CTAG 1 cut(s) 714
StyD4I CCNGG 3 cut(s) 395, 438, 717
StyI CCWWGG 2 cut(s) 412, 1032
TaaI ACNGT 6 cut(s) 88, 211, 256, 611, 949, 964
TaqI TCGA 2 cut(s) 8, 239
TasI AATT 4 cut(s) 62, 233, 533, 583
TatI WGTACW 1 cut(s) 951
TauI GCSGC 1 cut(s) 548
TfiI GAWTC 1 cut(s) 143
Tru1I TTAA 3 cut(s) 93, 387, 723
Tru9I TTAA 3 cut(s) 93, 387, 723
TscAI CASTG 3 cut(s) 487, 954, 1093
TseFI GTSAC 2 cut(s) 205, 1091
TseI GCWGC 4 cut(s) 487, 494, 548, 692
Tsp45I GTSAC 2 cut(s) 205, 1091
TspDTI ATGAA 3 cut(s) 361, 913, 1029
TspRI CASTG 3 cut(s) 487, 954, 1093
Van91I CCANNNNNTGG 2 cut(s) 88, 800
VpaK11BI GGWCC 4 cut(s) 399, 683, 860, 872
XhoI CTCGAG 1 cut(s) 238
XspI CTAG 1 cut(s) 714
Zsp2I ATGCAT 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.