Prupe.7G259000_v2.0.a1

Glyco_18

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21601467 .. 21603066
1600 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G259000.1

Sequence Viewer

Length: 1110 bp
ATGTCTTCCAAGTTAACACTTCCATTGATCCTTCTTTCGGGTCTCATTTTCCTTGCCCAACTCAGCTTCTCAACCGGCCAAACTGTGGTTAAGGGCGCTTACTGGTTTCCTGACAGTGGCTTCCCAGCCTCCAGCATAAATTCCAGCCTTTTCACTCATCTATTTTGCGCATTTGCTGATCTTAATTCCGACACTTACCAAGTCACCGTTTCTTCCTCAAACTCAGCCCCCTTCTCAAGCTTCACACAAACAGTACAAAAAAACAACCCTGCAGTGAAAACCCTCTTATCCATTGGCGGAGGAAATGCTAATCCAGCAACCTTTGCGGCAATGGCCAGCCAAGCCAGCCGGCGCAAATCATTCATTAACTCCTCCATCACGTTAGCAAGGTCTTACAACTTCCACGGCCTGGACCTCGACTGGGAATATCCATCCTCCACCACTGAGATGACCAACTTGGGCAGCCTTCTCACCGAGTGGCGAGCTGCCGTGGCCAATGAGTCCAAGGCCTCTGGCAAGACTGCTTTGCTTTTAGCCGCCGCTGTCTTTCGCTCTGCAGATTACTACACCATAAATTACCCCTTCCAGGCCATATCAAACAGTTTAGACTGGATCAATGTCATGGCTTATGACTTCTACGGCCCTGGTTGGTCCCCAAACAACACCGGACCACCTGCAGCATTGTACAACAGTCAGGTTAGCGGGAATGCTGGTATCACATCCTGGATTCAAGCAGGTTTGGCTGCCAAAAAGATAGTGCTAGGCCTTCCCTTTTATGGCTACGCATGGCGTTTATTGAACGCGAATAACCATGGCCTTTATGCTCCTGCTAATGGATCGGCTATAGGGCAATACGGGGATCAAGGCTACAACCAAATAAGAAATTTCATAAGCCAGAATGGGGCACAAACAGTGTACAATGCCACGGTTGTTACAAACTATTGCTACTCAGGAACAACATGGATTGGTTATGATGATACGCAGAGCATCTCTGCAAAGGTTTCATATGCCAAGGTAACAAAAGGGCTTCTTGGTTACTTTGCGTGGCATGTTGGTGCTGACAACAGTAATTGGGCTCTTTCTCAAACAGCTTCAAGCACATGGGGATGA

Protein Analysis

370

Amino Acids

39.69

Weight (kDa)

8.65

Isoelectric Point (pI)

28.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 682
Acc16I TGCGCA 1 cut(s) 169
Acc36I ACCTGC 2 cut(s) 682, 725
AccB7I CCANNNNNTGG 2 cut(s) 85, 409
AccII CGCG 1 cut(s) 803
AciI CCGC 5 cut(s) 297, 326, 537, 540, 702
AclWI GGATC 4 cut(s) 22, 620, 844, 867
AcoI YGGCCR 3 cut(s) 76, 333, 492
AcsI RAATTY 2 cut(s) 139, 883
AdeI CACNNNGTG 1 cut(s) 477
AfaI GTAC 3 cut(s) 255, 686, 917
AfiI CCNNNNNNNGG 9 cut(s) 37, 85, 116, 409, 421, 586, 776, 833, 901
AgsI TTSAA 3 cut(s) 731, 799, 1095
AjnI CCWGG 4 cut(s) 408, 585, 643, 722
AluBI AGCT 4 cut(s) 66, 240, 485, 1091
AluI AGCT 4 cut(s) 66, 240, 485, 1091
Alw26I GTCTC 1 cut(s) 47
AlwI GGATC 4 cut(s) 22, 620, 844, 867
AoxI GGCC 9 cut(s) 76, 333, 406, 492, 507, 588, 640, 763, 814
ApeKI GCWGC 4 cut(s) 462, 485, 677, 743
ApoI RAATTY 2 cut(s) 139, 883
AspLEI GCGC 3 cut(s) 98, 170, 354
AspS9I GGNCC 4 cut(s) 412, 641, 651, 668
AsuHPI GGTGA 2 cut(s) 196, 463
AvaII GGWCC 3 cut(s) 412, 651, 668
BaeGI GKGCMC 1 cut(s) 907
BalI TGGCCA 2 cut(s) 335, 494
BanII GRGCYC 1 cut(s) 1078
BbvI GCAGC 4 cut(s) 472, 474, 689, 730
BccI CCATC 2 cut(s) 383, 439
BceAI ACGGC 3 cut(s) 421, 473, 655
BciT130I CCWGG 4 cut(s) 410, 587, 645, 724
BcoDI GTCTC 1 cut(s) 47
BfaI CTAG 1 cut(s) 761
BfmI CTRYAG 4 cut(s) 270, 555, 675, 843
BfoI RGCGCY 1 cut(s) 99
BfuAI ACCTGC 2 cut(s) 682, 725
BisI GCNGC 7 cut(s) 327, 463, 486, 537, 540, 678, 744
BlsI GCNGC 7 cut(s) 328, 464, 487, 538, 541, 679, 745
Bme1390I CCNGG 4 cut(s) 410, 587, 645, 724
Bme18I GGWCC 3 cut(s) 412, 651, 668
BmgT120I GGNCC 4 cut(s) 412, 641, 651, 668
BmiI GGNNCC 1 cut(s) 653
BmrFI CCNGG 4 cut(s) 410, 587, 645, 724
BmrI ACTGGG 1 cut(s) 430
BmsI GCATC 1 cut(s) 996
BmuI ACTGGG 1 cut(s) 430
BpmI CTGGAG 1 cut(s) 115
BpuEI CTTGAG 1 cut(s) 220
BsaI GGTCTC 1 cut(s) 47
BsaJI CCNNGG 7 cut(s) 403, 489, 504, 643, 811, 924, 1011
BsaWI WCCGGW 1 cut(s) 665
Bsc4I CCNNNNNNNGG 9 cut(s) 37, 85, 116, 409, 421, 586, 776, 833, 901
Bse118I RCCGGY 2 cut(s) 74, 348
Bse1I ACTGG 3 cut(s) 107, 425, 614
Bse3DI GCAATG 1 cut(s) 336
BseBI CCWGG 4 cut(s) 410, 587, 645, 724
BseDI CCNNGG 7 cut(s) 403, 489, 504, 643, 811, 924, 1011
BseGI GGATG 2 cut(s) 431, 719
BseLI CCNNNNNNNGG 9 cut(s) 37, 85, 116, 409, 421, 586, 776, 833, 901
BseMI GCAATG 1 cut(s) 336
BseMII CTCAG 4 cut(s) 76, 237, 435, 963
BseNI ACTGG 3 cut(s) 107, 425, 614
BseRI GAGGAG 1 cut(s) 361
BseSI GKGCMC 1 cut(s) 907
BseXI GCAGC 4 cut(s) 472, 474, 689, 730
BseYI CCCAGC 1 cut(s) 124
Bsh1236I CGCG 1 cut(s) 803
BshFI GGCC 9 cut(s) 78, 335, 408, 494, 509, 590, 642, 765, 816
BsiSI CCGG 3 cut(s) 75, 349, 666
BslFI GGGAC 1 cut(s) 637
BslI CCNNNNNNNGG 9 cut(s) 37, 85, 116, 409, 421, 586, 776, 833, 901
BsmAI GTCTC 1 cut(s) 47
BsmFI GGGAC 1 cut(s) 637
BsmI GAATGC 1 cut(s) 712
BsnI GGCC 9 cut(s) 78, 335, 408, 494, 509, 590, 642, 765, 816
Bso31I GGTCTC 1 cut(s) 47
Bsp1286I GDGCHC 2 cut(s) 907, 1078
Bsp1407I TGTACA 2 cut(s) 684, 915
Bsp143I GATC 5 cut(s) 27, 178, 612, 836, 859
Bsp19I CCATGG 1 cut(s) 811
BspACI CCGC 5 cut(s) 297, 326, 537, 540, 702
BspANI GGCC 9 cut(s) 78, 335, 408, 494, 509, 590, 642, 765, 816
BspCNI CTCAG 4 cut(s) 75, 236, 436, 962
BspFNI CGCG 1 cut(s) 803
BspLI GGNNCC 1 cut(s) 653
BspMAI CTGCAG 3 cut(s) 274, 559, 679
BspMI ACCTGC 2 cut(s) 682, 725
BspPI GGATC 4 cut(s) 22, 620, 844, 867
BspTNI GGTCTC 1 cut(s) 47
BsrDI GCAATG 1 cut(s) 336
BsrFI RCCGGY 2 cut(s) 74, 348
BsrGI TGTACA 2 cut(s) 684, 915
BsrI ACTGG 3 cut(s) 107, 425, 614
BssAI RCCGGY 2 cut(s) 74, 348
BssECI CCNNGG 7 cut(s) 403, 489, 504, 643, 811, 924, 1011
BssMI GATC 5 cut(s) 27, 178, 612, 836, 859
BssT1I CCWWGG 3 cut(s) 504, 811, 1011
Bst2UI CCWGG 4 cut(s) 410, 587, 645, 724
Bst4CI ACNGT 9 cut(s) 85, 116, 208, 253, 602, 692, 913, 928, 1067
BstAPI GCANNNNNTGC 1 cut(s) 323
BstAUI TGTACA 2 cut(s) 684, 915
BstC8I GCNNGC 4 cut(s) 337, 346, 350, 483
BstDEI CTNAG 4 cut(s) 62, 223, 444, 949
BstDSI CCRYGG 4 cut(s) 403, 489, 811, 924
BstF5I GGATG 2 cut(s) 431, 719
BstFNI CGCG 1 cut(s) 803
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 3 cut(s) 98, 170, 354
BstKTI GATC 5 cut(s) 30, 181, 615, 839, 862
BstMAI GTCTC 1 cut(s) 47
BstMBI GATC 5 cut(s) 27, 178, 612, 836, 859
BstMWI GCNNNNNNNGC 7 cut(s) 314, 323, 332, 341, 345, 491, 740
BstNI CCWGG 4 cut(s) 410, 587, 645, 724
BstNSI RCATGY 1 cut(s) 1052
BstSCI CCNGG 4 cut(s) 408, 585, 643, 722
BstSFI CTRYAG 4 cut(s) 270, 555, 675, 843
BstSLI GKGCMC 1 cut(s) 907
BstUI CGCG 1 cut(s) 803
BstV1I GCAGC 4 cut(s) 472, 474, 689, 730
BsuRI GGCC 9 cut(s) 78, 335, 408, 494, 509, 590, 642, 765, 816
BtgI CCRYGG 4 cut(s) 403, 489, 811, 924
BtsCI GGATG 2 cut(s) 431, 719
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 4 cut(s) 121, 279, 441, 918
BveI ACCTGC 2 cut(s) 682, 725
Cac8I GCNNGC 4 cut(s) 337, 346, 350, 483
CfoI GCGC 3 cut(s) 98, 170, 354
Cfr10I RCCGGY 2 cut(s) 74, 348
Cfr13I GGNCC 4 cut(s) 412, 641, 651, 668
Csp6I GTAC 3 cut(s) 254, 685, 916
CviAII CATG 6 cut(s) 622, 786, 812, 960, 1049, 1101
CviQI GTAC 3 cut(s) 254, 685, 916
DdeI CTNAG 4 cut(s) 62, 223, 444, 949
DpnI GATC 5 cut(s) 29, 180, 614, 838, 861
DpnII GATC 5 cut(s) 27, 178, 612, 836, 859
DraIII CACNNNGTG 1 cut(s) 477
EaeI YGGCCR 3 cut(s) 76, 333, 492
EciI GGCGGA 1 cut(s) 312
Eco130I CCWWGG 3 cut(s) 504, 811, 1011
Eco147I AGGCCT 2 cut(s) 509, 765
Eco24I GRGCYC 1 cut(s) 1078
Eco31I GGTCTC 1 cut(s) 47
Eco47I GGWCC 3 cut(s) 412, 651, 668
EcoRII CCWGG 4 cut(s) 408, 585, 643, 722
EcoT14I CCWWGG 3 cut(s) 504, 811, 1011
EcoT38I GRGCYC 1 cut(s) 1078
ErhI CCWWGG 3 cut(s) 504, 811, 1011
FaeI CATG 6 cut(s) 625, 789, 815, 963, 1052, 1104
FalI AAGNNNNNCTT 2 cut(s) 1014, 1046
FaqI GGGAC 1 cut(s) 637
FatI CATG 6 cut(s) 621, 785, 811, 959, 1048, 1100
FauI CCCGC 1 cut(s) 695
FauNDI CATATG 1 cut(s) 1006
Fnu4HI GCNGC 7 cut(s) 327, 463, 486, 537, 540, 678, 744
FokI GGATG 2 cut(s) 418, 706
FriOI GRGCYC 1 cut(s) 1078
Fsp4HI GCNGC 7 cut(s) 327, 463, 486, 537, 540, 678, 744
FspBI CTAG 1 cut(s) 761
FspI TGCGCA 1 cut(s) 169
GlaI GCGC 3 cut(s) 97, 169, 353
GluI GCNGC 7 cut(s) 327, 463, 486, 537, 540, 678, 744
GsaI CCCAGC 1 cut(s) 128
GsuI CTGGAG 1 cut(s) 115
HaeII RGCGCY 1 cut(s) 99
HaeIII GGCC 9 cut(s) 78, 335, 408, 494, 509, 590, 642, 765, 816
HapII CCGG 3 cut(s) 75, 349, 666
HhaI GCGC 3 cut(s) 98, 170, 354
Hin1II CATG 6 cut(s) 625, 789, 815, 963, 1052, 1104
Hin6I GCGC 3 cut(s) 96, 168, 352
HinP1I GCGC 3 cut(s) 96, 168, 352
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 238
HinfI GANTC 2 cut(s) 500, 727
HpaI GTTAAC 1 cut(s) 15
HpaII CCGG 3 cut(s) 75, 349, 666
HphI GGTGA 2 cut(s) 196, 463
Hpy166II GTNNAC 2 cut(s) 15, 916
Hpy188I TCNGA 1 cut(s) 190
Hpy188III TCNNGA 2 cut(s) 110, 951
Hpy8I GTNNAC 2 cut(s) 15, 916
HpyAV CCTTC 5 cut(s) 41, 241, 476, 592, 776
HpyCH4III ACNGT 9 cut(s) 85, 116, 208, 253, 602, 692, 913, 928, 1067
HpyCH4IV ACGT 1 cut(s) 380
HpyCH4V TGCA 4 cut(s) 272, 557, 677, 995
HpyF10VI GCNNNNNNNGC 7 cut(s) 314, 323, 332, 341, 345, 491, 740
HpyF3I CTNAG 4 cut(s) 62, 223, 444, 949
HpySE526I ACGT 1 cut(s) 380
Hsp92II CATG 6 cut(s) 625, 789, 815, 963, 1052, 1104
HspAI GCGC 3 cut(s) 96, 168, 352
KroI GCCGGC 1 cut(s) 348
KroNI GCCGGC 1 cut(s) 350
KspAI GTTAAC 1 cut(s) 15
Kzo9I GATC 5 cut(s) 27, 178, 612, 836, 859
LmnI GCTCC 1 cut(s) 829
Lsp1109I GCAGC 4 cut(s) 472, 474, 689, 730
LweI GCATC 1 cut(s) 996
MaeI CTAG 1 cut(s) 761
MaeII ACGT 1 cut(s) 380
MaeIII GTNAC 4 cut(s) 202, 931, 1015, 1034
MalI GATC 5 cut(s) 29, 180, 614, 838, 861
MboI GATC 5 cut(s) 27, 178, 612, 836, 859
MboII GAAGA 1 cut(s) 204
MhlI GDGCHC 2 cut(s) 907, 1078
MlsI TGGCCA 2 cut(s) 335, 494
MluCI AATT 5 cut(s) 139, 184, 574, 883, 1069
MluNI TGGCCA 2 cut(s) 335, 494
MlyI GAGTC 1 cut(s) 509
MmeI TCCRAC 1 cut(s) 213
MnlI CCTC 8 cut(s) 139, 226, 293, 293, 382, 425, 445, 520
Mox20I TGGCCA 2 cut(s) 335, 494
MroNI GCCGGC 1 cut(s) 348
MscI TGGCCA 2 cut(s) 335, 494
MseI TTAA 4 cut(s) 14, 90, 183, 366
MslI CAYNNNNRTG 3 cut(s) 446, 1053, 1105
Msp20I TGGCCA 2 cut(s) 335, 494
MspA1I CMGCKG 1 cut(s) 542
MspI CCGG 3 cut(s) 75, 349, 666
MspR9I CCNGG 4 cut(s) 410, 587, 645, 724
Mva1269I GAATGC 1 cut(s) 712
MvaI CCWGG 4 cut(s) 410, 587, 645, 724
MvnI CGCG 1 cut(s) 803
MwoI GCNNNNNNNGC 7 cut(s) 314, 323, 332, 341, 345, 491, 740
NaeI GCCGGC 1 cut(s) 350
NcoI CCATGG 1 cut(s) 811
NdeI CATATG 1 cut(s) 1006
NdeII GATC 5 cut(s) 27, 178, 612, 836, 859
NgoMIV GCCGGC 1 cut(s) 348
NlaIII CATG 6 cut(s) 625, 789, 815, 963, 1052, 1104
NlaIV GGNNCC 1 cut(s) 653
NmuCI GTSAC 1 cut(s) 202
NsbI TGCGCA 1 cut(s) 169
NspI RCATGY 1 cut(s) 1052
PaqCI CACCTGC 1 cut(s) 682
PceI AGGCCT 2 cut(s) 509, 765
PctI GAATGC 1 cut(s) 712
PdiI GCCGGC 1 cut(s) 350
PfeI GAWTC 1 cut(s) 727
PflMI CCANNNNNTGG 2 cut(s) 85, 409
PfoI TCCNGGA 1 cut(s) 722
PkrI GCNGC 7 cut(s) 328, 464, 487, 538, 541, 679, 745
PleI GAGTC 1 cut(s) 508
PpsI GAGTC 1 cut(s) 508
Psp6I CCWGG 4 cut(s) 408, 585, 643, 722
PspFI CCCAGC 1 cut(s) 124
PspGI CCWGG 4 cut(s) 408, 585, 643, 722
PspN4I GGNNCC 1 cut(s) 653
PspPI GGNCC 4 cut(s) 412, 641, 651, 668
PstI CTGCAG 3 cut(s) 274, 559, 679
RsaI GTAC 3 cut(s) 255, 686, 917
RsaNI GTAC 3 cut(s) 254, 685, 916
RseI CAYNNNNRTG 3 cut(s) 446, 1053, 1105
SaqAI TTAA 4 cut(s) 14, 90, 183, 366
SatI GCNGC 7 cut(s) 327, 463, 486, 537, 540, 678, 744
Sau3AI GATC 5 cut(s) 27, 178, 612, 836, 859
Sau96I GGNCC 4 cut(s) 412, 641, 651, 668
SchI GAGTC 1 cut(s) 509
ScrFI CCNGG 4 cut(s) 410, 587, 645, 724
SduI GDGCHC 2 cut(s) 907, 1078
SfaNI GCATC 1 cut(s) 996
SfcI CTRYAG 4 cut(s) 270, 555, 675, 843
SinI GGWCC 3 cut(s) 412, 651, 668
SmiMI CAYNNNNRTG 3 cut(s) 446, 1053, 1105
SmlI CTYRAG 1 cut(s) 235
SmoI CTYRAG 1 cut(s) 235
Sse9I AATT 5 cut(s) 139, 184, 574, 883, 1069
SseBI AGGCCT 2 cut(s) 509, 765
SsiI CCGC 5 cut(s) 297, 326, 537, 540, 702
SspMI CTAG 1 cut(s) 761
StuI AGGCCT 2 cut(s) 509, 765
StyD4I CCNGG 4 cut(s) 408, 585, 643, 722
StyI CCWWGG 3 cut(s) 504, 811, 1011
TaaI ACNGT 9 cut(s) 85, 116, 208, 253, 602, 692, 913, 928, 1067
TaiI ACGT 1 cut(s) 383
TaqI TCGA 1 cut(s) 417
TasI AATT 5 cut(s) 139, 184, 574, 883, 1069
TatI WGTACW 3 cut(s) 253, 684, 915
TauI GCSGC 3 cut(s) 329, 539, 542
TfiI GAWTC 1 cut(s) 727
Tru1I TTAA 4 cut(s) 14, 90, 183, 366
Tru9I TTAA 4 cut(s) 14, 90, 183, 366
TscAI CASTG 4 cut(s) 121, 279, 448, 918
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 4 cut(s) 462, 485, 677, 743
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 3 cut(s) 352, 877, 993
TspRI CASTG 4 cut(s) 121, 279, 448, 918
Van91I CCANNNNNTGG 2 cut(s) 85, 409
VpaK11BI GGWCC 3 cut(s) 412, 651, 668
XapI RAATTY 2 cut(s) 139, 883
XceI RCATGY 1 cut(s) 1052
XspI CTAG 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.