Glyco_18
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19720 AT4G19740 AT4G19750 AT4G19760 AT4G19770 AT4G19800 AT4G19810 AT4G19810 AT4G19820 |
| fragaria_vesca | FvH4_1g01321 FvH4_1g01362 FvH4_1g01382 |
| malus_domestica | MD02G1011100.v1.1 MD15G1156100.v1.1 |
| prunus_persica | Prupe.4G180800_v2.0.a1 Prupe.7G258500_v2.0.a1 Prupe.7G259000_v2.0.a1 |
| pyrus_communis | pycom02g01000 |
| rosa_chinensis | RchiOBHm_Chr2g0086161 |
| rosa_laevigata | RLG00000027969 RLG00000033389 |
| rosa_multiflora | Rmu_co8454935.1_g000002 Rmu_sc0004510.1_g000010 Rmu_sc0004948.1_g000003 Rmu_sc0004948.1_g000021 |
| rosa_roxburghii | Rroxscaffold_152G00434840 |
| rosa_rugosa | Rorug01G0466300 |
| rosa_samantha | Rh2AG016100 Rh2CG017000 Rh2DG018100 |
| rosa_wichuraiana | Rw2G001390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 172 |
| AccII | CGCG | 2 cut(s) | 491, 921 |
| AccIII | TCCGGA | 1 cut(s) | 112 |
| AclWI | GGATC | 5 cut(s) | 623, 699, 712, 755, 992 |
| AcoI | YGGCCR | 3 cut(s) | 121, 336, 495 |
| AcyI | GRCGYC | 1 cut(s) | 729 |
| AfaI | GTAC | 6 cut(s) | 431, 695, 806, 938, 1028, 1117 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 105, 119, 424, 559, 800 |
| AjnI | CCWGG | 3 cut(s) | 342, 588, 885 |
| AluBI | AGCT | 4 cut(s) | 542, 686, 854, 1109 |
| AluI | AGCT | 4 cut(s) | 542, 686, 854, 1109 |
| Alw26I | GTCTC | 5 cut(s) | 73, 136, 719, 720, 876 |
| AlwI | GGATC | 5 cut(s) | 623, 699, 712, 755, 992 |
| Aor13HI | TCCGGA | 1 cut(s) | 112 |
| AoxI | GGCC | 6 cut(s) | 121, 336, 345, 409, 495, 643 |
| ApeKI | GCWGC | 5 cut(s) | 329, 465, 542, 603, 686 |
| AspLEI | GCGC | 3 cut(s) | 173, 357, 1016 |
| AspS9I | GGNCC | 2 cut(s) | 486, 644 |
| AsuHPI | GGTGA | 3 cut(s) | 148, 199, 219 |
| AvaII | GGWCC | 1 cut(s) | 486 |
| BalI | TGGCCA | 3 cut(s) | 123, 338, 497 |
| BamHI | GGATCC | 1 cut(s) | 704 |
| BbsI | GAAGAC | 2 cut(s) | 541, 782 |
| BbvI | GCAGC | 5 cut(s) | 316, 477, 529, 615, 673 |
| BccI | CCATC | 4 cut(s) | 50, 168, 302, 386 |
| BceAI | ACGGC | 3 cut(s) | 424, 540, 658 |
| BciT130I | CCWGG | 3 cut(s) | 344, 590, 887 |
| BclI | TGATCA | 1 cut(s) | 912 |
| BcoDI | GTCTC | 5 cut(s) | 73, 136, 719, 720, 876 |
| BfaI | CTAG | 3 cut(s) | 419, 608, 648 |
| BfmI | CTRYAG | 2 cut(s) | 543, 568 |
| BfoI | RGCGCY | 1 cut(s) | 1017 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 344 |
| BisI | GCNGC | 8 cut(s) | 75, 99, 330, 466, 543, 604, 687, 919 |
| BlsI | GCNGC | 8 cut(s) | 76, 100, 331, 467, 544, 605, 688, 920 |
| Bme1390I | CCNGG | 3 cut(s) | 344, 590, 887 |
| Bme18I | GGWCC | 1 cut(s) | 486 |
| BmgT120I | GGNCC | 2 cut(s) | 486, 644 |
| BmiI | GGNNCC | 1 cut(s) | 706 |
| BmrFI | CCNGG | 3 cut(s) | 344, 590, 887 |
| BpiI | GAAGAC | 2 cut(s) | 541, 782 |
| BpmI | CTGGAG | 1 cut(s) | 694 |
| BpuEI | CTTGAG | 1 cut(s) | 834 |
| BsaHI | GRCGYC | 1 cut(s) | 729 |
| BsaI | GGTCTC | 1 cut(s) | 876 |
| BsaJI | CCNNGG | 8 cut(s) | 333, 444, 489, 835, 886, 919, 945, 1017 |
| BsaWI | WCCGGW | 1 cut(s) | 112 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 422, 452 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 105, 119, 424, 559, 800 |
| Bse1I | ACTGG | 4 cut(s) | 110, 617, 711, 1075 |
| Bse3DI | GCAATG | 1 cut(s) | 562 |
| BseAI | TCCGGA | 1 cut(s) | 112 |
| BseBI | CCWGG | 3 cut(s) | 344, 590, 887 |
| BseDI | CCNNGG | 8 cut(s) | 333, 444, 489, 835, 886, 919, 945, 1017 |
| BseGI | GGATG | 3 cut(s) | 5, 42, 374 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 105, 119, 424, 559, 800 |
| BseMI | GCAATG | 1 cut(s) | 562 |
| BseNI | ACTGG | 4 cut(s) | 110, 617, 711, 1075 |
| BseRI | GAGGAG | 3 cut(s) | 124, 278, 461 |
| BseXI | GCAGC | 5 cut(s) | 316, 477, 529, 615, 673 |
| Bsh1236I | CGCG | 2 cut(s) | 491, 921 |
| BshFI | GGCC | 6 cut(s) | 123, 338, 347, 411, 497, 645 |
| BsiSI | CCGG | 4 cut(s) | 113, 516, 732, 759 |
| BsiWI | CGTACG | 1 cut(s) | 1026 |
| BslFI | GGGAC | 1 cut(s) | 988 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 105, 119, 424, 559, 800 |
| BsmAI | GTCTC | 5 cut(s) | 73, 136, 719, 720, 876 |
| BsmBI | CGTCTC | 1 cut(s) | 720 |
| BsmFI | GGGAC | 1 cut(s) | 988 |
| BsmI | GAATGC | 2 cut(s) | 173, 362 |
| BsnI | GGCC | 6 cut(s) | 123, 338, 347, 411, 497, 645 |
| Bso31I | GGTCTC | 1 cut(s) | 876 |
| Bsp13I | TCCGGA | 1 cut(s) | 112 |
| Bsp1407I | TGTACA | 2 cut(s) | 693, 936 |
| Bsp143I | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| Bsp19I | CCATGG | 2 cut(s) | 333, 835 |
| BspANI | GGCC | 6 cut(s) | 123, 338, 347, 411, 497, 645 |
| BspEI | TCCGGA | 1 cut(s) | 112 |
| BspFNI | CGCG | 2 cut(s) | 491, 921 |
| BspHI | TCATGA | 1 cut(s) | 624 |
| BspLI | GGNNCC | 1 cut(s) | 706 |
| BspMAI | CTGCAG | 1 cut(s) | 547 |
| BspPI | GGATC | 5 cut(s) | 623, 699, 712, 755, 992 |
| BspQI | GCTCTTC | 1 cut(s) | 1050 |
| BspTNI | GGTCTC | 1 cut(s) | 876 |
| BsrDI | GCAATG | 1 cut(s) | 562 |
| BsrGI | TGTACA | 2 cut(s) | 693, 936 |
| BsrI | ACTGG | 4 cut(s) | 110, 617, 711, 1075 |
| BssECI | CCNNGG | 8 cut(s) | 333, 444, 489, 835, 886, 919, 945, 1017 |
| BssMI | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| BssNI | GRCGYC | 1 cut(s) | 729 |
| BssT1I | CCWWGG | 3 cut(s) | 333, 835, 1017 |
| Bst2UI | CCWGG | 3 cut(s) | 344, 590, 887 |
| Bst4CI | ACNGT | 7 cut(s) | 88, 119, 256, 701, 907, 934, 949 |
| Bst6I | CTCTTC | 6 cut(s) | 27, 38, 53, 158, 170, 1050 |
| BstACI | GRCGYC | 1 cut(s) | 729 |
| BstAUI | TGTACA | 2 cut(s) | 693, 936 |
| BstC8I | GCNNGC | 2 cut(s) | 340, 684 |
| BstDSI | CCRYGG | 6 cut(s) | 333, 444, 489, 835, 919, 945 |
| BstF5I | GGATG | 3 cut(s) | 5, 42, 374 |
| BstFNI | CGCG | 2 cut(s) | 491, 921 |
| BstH2I | RGCGCY | 1 cut(s) | 1017 |
| BstHHI | GCGC | 3 cut(s) | 173, 357, 1016 |
| BstKTI | GATC | 6 cut(s) | 184, 618, 707, 750, 915, 987 |
| BstMAI | GTCTC | 5 cut(s) | 73, 136, 719, 720, 876 |
| BstMBI | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 335, 344, 516, 872 |
| BstNI | CCWGG | 3 cut(s) | 344, 590, 887 |
| BstSCI | CCNGG | 3 cut(s) | 342, 588, 885 |
| BstSFI | CTRYAG | 2 cut(s) | 543, 568 |
| BstUI | CGCG | 2 cut(s) | 491, 921 |
| BstV1I | GCAGC | 5 cut(s) | 316, 477, 529, 615, 673 |
| BstV2I | GAAGAC | 2 cut(s) | 541, 782 |
| BstX2I | RGATCY | 1 cut(s) | 704 |
| BstYI | RGATCY | 1 cut(s) | 704 |
| BsuRI | GGCC | 6 cut(s) | 123, 338, 347, 411, 497, 645 |
| BtgI | CCRYGG | 6 cut(s) | 333, 444, 489, 835, 919, 945 |
| BtsCI | GGATG | 3 cut(s) | 5, 42, 374 |
| BtsIMutI | CAGTG | 2 cut(s) | 124, 474 |
| Cac8I | GCNNGC | 2 cut(s) | 340, 684 |
| CciI | TCATGA | 1 cut(s) | 624 |
| CfoI | GCGC | 3 cut(s) | 173, 357, 1016 |
| Cfr13I | GGNCC | 2 cut(s) | 486, 644 |
| Cfr42I | CCGCGG | 2 cut(s) | 492, 922 |
| CpoI | CGGWCCG | 1 cut(s) | 486 |
| CseI | GACGC | 1 cut(s) | 737 |
| Csp6I | GTAC | 6 cut(s) | 430, 694, 805, 937, 1027, 1116 |
| CspI | CGGWCCG | 1 cut(s) | 486 |
| CviAII | CATG | 4 cut(s) | 334, 625, 836, 1119 |
| CviQI | GTAC | 6 cut(s) | 430, 694, 805, 937, 1027, 1116 |
| DpnI | GATC | 6 cut(s) | 183, 617, 706, 749, 914, 986 |
| DpnII | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| EaeI | YGGCCR | 3 cut(s) | 121, 336, 495 |
| Eam1104I | CTCTTC | 6 cut(s) | 27, 38, 53, 158, 170, 1050 |
| EarI | CTCTTC | 6 cut(s) | 27, 38, 53, 158, 170, 1050 |
| EciI | GGCGGA | 4 cut(s) | 28, 61, 315, 430 |
| Eco130I | CCWWGG | 3 cut(s) | 333, 835, 1017 |
| Eco31I | GGTCTC | 1 cut(s) | 876 |
| Eco47I | GGWCC | 1 cut(s) | 486 |
| EcoRII | CCWGG | 3 cut(s) | 342, 588, 885 |
| EcoT14I | CCWWGG | 3 cut(s) | 333, 835, 1017 |
| ErhI | CCWWGG | 3 cut(s) | 333, 835, 1017 |
| Esp3I | CGTCTC | 1 cut(s) | 720 |
| FaeI | CATG | 4 cut(s) | 337, 628, 839, 1122 |
| FaqI | GGGAC | 1 cut(s) | 988 |
| FatI | CATG | 4 cut(s) | 333, 624, 835, 1118 |
| FauI | CCCGC | 2 cut(s) | 687, 914 |
| FbaI | TGATCA | 1 cut(s) | 912 |
| Fnu4HI | GCNGC | 8 cut(s) | 75, 99, 330, 466, 543, 604, 687, 919 |
| FokI | GGATG | 2 cut(s) | 29, 361 |
| Fsp4HI | GCNGC | 8 cut(s) | 75, 99, 330, 466, 543, 604, 687, 919 |
| FspBI | CTAG | 3 cut(s) | 419, 608, 648 |
| FspI | TGCGCA | 1 cut(s) | 172 |
| GlaI | GCGC | 3 cut(s) | 172, 356, 1015 |
| GluI | GCNGC | 8 cut(s) | 75, 99, 330, 466, 543, 604, 687, 919 |
| GsuI | CTGGAG | 1 cut(s) | 694 |
| HaeII | RGCGCY | 1 cut(s) | 1017 |
| HaeIII | GGCC | 6 cut(s) | 123, 338, 347, 411, 497, 645 |
| HapII | CCGG | 4 cut(s) | 113, 516, 732, 759 |
| HgaI | GACGC | 1 cut(s) | 737 |
| HhaI | GCGC | 3 cut(s) | 173, 357, 1016 |
| Hin1I | GRCGYC | 1 cut(s) | 729 |
| Hin1II | CATG | 4 cut(s) | 337, 628, 839, 1122 |
| Hin6I | GCGC | 3 cut(s) | 171, 355, 1014 |
| HinP1I | GCGC | 3 cut(s) | 171, 355, 1014 |
| HincII | GTYRAC | 1 cut(s) | 537 |
| HindII | GTYRAC | 1 cut(s) | 537 |
| HinfI | GANTC | 5 cut(s) | 371, 503, 735, 762, 1093 |
| HpaII | CCGG | 4 cut(s) | 113, 516, 732, 759 |
| HphI | GGTGA | 3 cut(s) | 148, 199, 219 |
| Hpy166II | GTNNAC | 2 cut(s) | 537, 937 |
| Hpy188I | TCNGA | 1 cut(s) | 930 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 625 |
| Hpy8I | GTNNAC | 2 cut(s) | 537, 937 |
| Hpy99I | CGWCG | 1 cut(s) | 92 |
| HpyAV | CCTTC | 5 cut(s) | 253, 334, 412, 444, 653 |
| HpyCH4III | ACNGT | 7 cut(s) | 88, 119, 256, 701, 907, 934, 949 |
| HpyCH4IV | ACGT | 2 cut(s) | 621, 629 |
| HpyCH4V | TGCA | 2 cut(s) | 545, 689 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 335, 344, 516, 872 |
| HpySE526I | ACGT | 2 cut(s) | 621, 629 |
| Hsp92I | GRCGYC | 1 cut(s) | 729 |
| Hsp92II | CATG | 4 cut(s) | 337, 628, 839, 1122 |
| HspAI | GCGC | 3 cut(s) | 171, 355, 1014 |
| Kpn2I | TCCGGA | 1 cut(s) | 112 |
| Ksp22I | TGATCA | 1 cut(s) | 912 |
| KspI | CCGCGG | 2 cut(s) | 492, 922 |
| Kzo9I | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| LguI | GCTCTTC | 1 cut(s) | 1050 |
| Lsp1109I | GCAGC | 5 cut(s) | 316, 477, 529, 615, 673 |
| MaeI | CTAG | 3 cut(s) | 419, 608, 648 |
| MaeII | ACGT | 2 cut(s) | 621, 629 |
| MaeIII | GTNAC | 4 cut(s) | 205, 956, 989, 1052 |
| MalI | GATC | 6 cut(s) | 183, 617, 706, 749, 914, 986 |
| MboI | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| MboII | GAAGA | 9 cut(s) | 14, 25, 40, 145, 157, 541, 782, 787, 1037 |
| MflI | RGATCY | 1 cut(s) | 704 |
| MlsI | TGGCCA | 3 cut(s) | 123, 338, 497 |
| MluCI | AATT | 3 cut(s) | 233, 383, 815 |
| MluNI | TGGCCA | 3 cut(s) | 123, 338, 497 |
| MlyI | GAGTC | 3 cut(s) | 365, 512, 1087 |
| MmeI | TCCRAC | 2 cut(s) | 283, 336 |
| Mox20I | TGGCCA | 3 cut(s) | 123, 338, 497 |
| MroI | TCCGGA | 1 cut(s) | 112 |
| MscI | TGGCCA | 3 cut(s) | 123, 338, 497 |
| MseI | TTAA | 2 cut(s) | 93, 821 |
| MslI | CAYNNNNRTG | 4 cut(s) | 63, 449, 1071, 1123 |
| Msp20I | TGGCCA | 3 cut(s) | 123, 338, 497 |
| MspA1I | CMGCKG | 4 cut(s) | 491, 542, 686, 921 |
| MspI | CCGG | 4 cut(s) | 113, 516, 732, 759 |
| MspR9I | CCNGG | 3 cut(s) | 344, 590, 887 |
| Mva1269I | GAATGC | 2 cut(s) | 173, 362 |
| MvaI | CCWGG | 3 cut(s) | 344, 590, 887 |
| MvnI | CGCG | 2 cut(s) | 491, 921 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 335, 344, 516, 872 |
| NcoI | CCATGG | 2 cut(s) | 333, 835 |
| NdeII | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| NlaIII | CATG | 4 cut(s) | 337, 628, 839, 1122 |
| NlaIV | GGNNCC | 1 cut(s) | 706 |
| NmeAIII | GCCGAG | 2 cut(s) | 331, 842 |
| NmuCI | GTSAC | 1 cut(s) | 205 |
| NsbI | TGCGCA | 1 cut(s) | 172 |
| PagI | TCATGA | 1 cut(s) | 624 |
| PciSI | GCTCTTC | 1 cut(s) | 1050 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 735 |
| PctI | GAATGC | 2 cut(s) | 173, 362 |
| PfeI | GAWTC | 2 cut(s) | 735, 762 |
| Pfl23II | CGTACG | 1 cut(s) | 1026 |
| PkrI | GCNGC | 8 cut(s) | 76, 100, 331, 467, 544, 605, 688, 920 |
| PleI | GAGTC | 3 cut(s) | 365, 511, 1087 |
| PpsI | GAGTC | 3 cut(s) | 365, 511, 1087 |
| Psp6I | CCWGG | 3 cut(s) | 342, 588, 885 |
| PspGI | CCWGG | 3 cut(s) | 342, 588, 885 |
| PspLI | CGTACG | 1 cut(s) | 1026 |
| PspN4I | GGNNCC | 1 cut(s) | 706 |
| PspPI | GGNCC | 2 cut(s) | 486, 644 |
| PstI | CTGCAG | 1 cut(s) | 547 |
| PsuI | RGATCY | 1 cut(s) | 704 |
| PvuII | CAGCTG | 2 cut(s) | 542, 686 |
| RsaI | GTAC | 6 cut(s) | 431, 695, 806, 938, 1028, 1117 |
| RsaNI | GTAC | 6 cut(s) | 430, 694, 805, 937, 1027, 1116 |
| RseI | CAYNNNNRTG | 4 cut(s) | 63, 449, 1071, 1123 |
| Rsr2I | CGGWCCG | 1 cut(s) | 486 |
| RsrII | CGGWCCG | 1 cut(s) | 486 |
| SacII | CCGCGG | 2 cut(s) | 492, 922 |
| SapI | GCTCTTC | 1 cut(s) | 1050 |
| SaqAI | TTAA | 2 cut(s) | 93, 821 |
| SatI | GCNGC | 8 cut(s) | 75, 99, 330, 466, 543, 604, 687, 919 |
| Sau3AI | GATC | 6 cut(s) | 181, 615, 704, 747, 912, 984 |
| Sau96I | GGNCC | 2 cut(s) | 486, 644 |
| SchI | GAGTC | 3 cut(s) | 365, 512, 1087 |
| ScrFI | CCNGG | 3 cut(s) | 344, 590, 887 |
| SfcI | CTRYAG | 2 cut(s) | 543, 568 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 344 |
| Sfr303I | CCGCGG | 2 cut(s) | 492, 922 |
| SgrBI | CCGCGG | 2 cut(s) | 492, 922 |
| SinI | GGWCC | 1 cut(s) | 486 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 63, 449, 1071, 1123 |
| SmlI | CTYRAG | 1 cut(s) | 849 |
| SmoI | CTYRAG | 1 cut(s) | 849 |
| Sse9I | AATT | 3 cut(s) | 233, 383, 815 |
| SspMI | CTAG | 3 cut(s) | 419, 608, 648 |
| StyD4I | CCNGG | 3 cut(s) | 342, 588, 885 |
| StyI | CCWWGG | 3 cut(s) | 333, 835, 1017 |
| TaaI | ACNGT | 7 cut(s) | 88, 119, 256, 701, 907, 934, 949 |
| TaiI | ACGT | 2 cut(s) | 624, 632 |
| TaqI | TCGA | 1 cut(s) | 599 |
| TasI | AATT | 3 cut(s) | 233, 383, 815 |
| TatI | WGTACW | 3 cut(s) | 693, 936, 1115 |
| TauI | GCSGC | 3 cut(s) | 77, 101, 921 |
| TfiI | GAWTC | 2 cut(s) | 735, 762 |
| Tru1I | TTAA | 2 cut(s) | 93, 821 |
| Tru9I | TTAA | 2 cut(s) | 93, 821 |
| TscAI | CASTG | 2 cut(s) | 124, 481 |
| TseFI | GTSAC | 1 cut(s) | 205 |
| TseI | GCWGC | 5 cut(s) | 329, 465, 542, 603, 686 |
| Tsp45I | GTSAC | 1 cut(s) | 205 |
| TspDTI | ATGAA | 1 cut(s) | 355 |
| TspGWI | ACGGA | 3 cut(s) | 461, 738, 783 |
| TspRI | CASTG | 2 cut(s) | 124, 481 |
| VpaK11BI | GGWCC | 1 cut(s) | 486 |
| XspI | CTAG | 3 cut(s) | 419, 608, 648 |