Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005259

Physical Location & Seq

Genomic Coordinates Forward (+)

1154046 .. 1156168

Gene Structure 2123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G014100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGGAGCAAGTGGATGTTGTGATCGTAGGTGCTGGTCCTGCCGGCATTGCAACCTCTGCATGTCTCAACCGCCTTAATATTTCAAACGTTGTACTTGAAAGAGAAGATTGTTATGCTTCTCTTTGGAAGAAAAGGTCGTATGATCGTCTGAAGCTTCACTTGGCAAAGCAATTTTGCGAGCTTCCCCATATGCCATTTCCTCCAAATGCACCAAAGTATGTCCCCAAGGATCAGTTTGTTGAATACTTGGATTCTTATGTGTCTCATTTTAAGATACAACCTCTGTACCACCGTGTCGTGGAAACTGCTTTTTACGACGCAGATGTCGAAAAATGGCACGTCATTGTGAAAAACACATCTTTGGATGCTCAAGAAATTTACCTTGGTAAGTTTCTTGTGGTTGCAAGTGGTGAAAATAGTGAGGGTTATATTCCTCAAGTGCAAGGCCTGGATAGCTTTGGAGGGGAGTTCATGCATTCAAGTAAGTACGAAAATGGCAAGAAATATAGTGGAAAAAATGTTTTGGTTGTTGGTTGTGGGAACTCAGGCATGGAAATTGCTTATGATTTATCAAATTCGGGTGCAAATACTTCCATTGTTGTCCGTTCTCCGATACATGTTCTCACCAAGGAAATCGTGTTCCTTGGAATGGTGATGGCAAAATACATTCCTATTAATTTGGTCGACAACGTTATGGTTATCTTAAGCAAATTAAGGTTTGGAGATTTATCCAAGTATGGAATTCGAAGGCCCAAAAGTGGACCCTTTTTTCTCAAGGAAAAGGGTCAAGCCCCCATCATTGATGTAGGGAGCGTTAACAAGATCAGGACCGGAGAATTAAAGGTCGTTCCATCCATCACAAGCATCCAAGGAGACAATATCGAGTTTGAGAATGGCTGCAAAGACCGCTTTGATGCTATTGTATTTGCTACTGGCTACAAAAGCACTGTGCTAAATTGGCTCAAGGATGGGCACAATCTCTTCAATGACGATGGAATGCCGAAACAAAGTTTCCCAAATAACTGGAAAGGGAAGAACGGTCTTTACTGTGCTGGATTTTCTAGGCGTGGATTATTTGGCATTTCACATGATGCGCGAATGATAATAAGCGACATTAGCTTTGCTTTGGATCAGAACAAGAAAAAGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

ko00380 ko01100 map00380 map01100

Pfam Domains

Protein Families

FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

384

Amino Acids

42.74

Weight (kDa)

8.78

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005259)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21430
fragaria_vesca	FvH4_2g14550 FvH4_2g15120
malus_domestica	MD10G1010000.v1.1 MD10G1010100.v1.1 MD10G1010200.v1.1 MD10G1010300.v1.1 MD15G1274600.v1.1
prunus_persica	Prupe.8G014100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0484941 RchiOBHm_Chr4g0439711
rosa_laevigata	RLG00000006243 RLG00000023184
rosa_multiflora	Rmu_sc0002724.1_g000045 Rmu_sc0023161.1_g000001
rosa_roxburghii	Rroxscaffold_5G00380650 Rroxscaffold_6G00397340 Rroxscaffold_7G00191000
rosa_rugosa	Rorug03G0214400 Rorug04G0320900 Rorug06G0110500
rosa_samantha	Rh3AG264900 Rh3BG300400 Rh3DG294100 Rh4AG371900 Rh4BG383800 Rh4CG398500
rosa_wichuraiana	Rw3G023670 Rw4G031740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
AccI	GTMKAC	1 cut(s)	684
AccII	CGCG	1 cut(s)	1096
AciI	CCGC	2 cut(s)	70, 907
AclI	AACGTT	2 cut(s)	87, 690
AclWI	GGATC	2 cut(s)	237, 1137
AcsI	RAATTY	3 cut(s)	375, 574, 741
AcuI	CTGAAG	1 cut(s)	170
AfaI	GTAC	3 cut(s)	93, 287, 488
AfiI	CCNNNNNNNGG	3 cut(s)	298, 649, 758
AflII	CTTAAG	1 cut(s)	703
AflIII	ACRYGT	1 cut(s)	616
AgsI	TTSAA	5 cut(s)	84, 98, 242, 480, 985
AjiI	CACGTC	1 cut(s)	340
AjnI	CCWGG	1 cut(s)	447
AjuI	GAANNNNNNNTTGG	4 cut(s)	143, 175, 366, 398
AloI	GAACNNNNNNTCC	2 cut(s)	623, 655
AluBI	AGCT	4 cut(s)	154, 181, 456, 1119
AluI	AGCT	4 cut(s)	154, 181, 456, 1119
Alw26I	GTCTC	3 cut(s)	68, 267, 867
AlwI	GGATC	2 cut(s)	237, 1137
AoxI	GGCC	2 cut(s)	445, 749
ApeKI	GCWGC	1 cut(s)	897
ApoI	RAATTY	3 cut(s)	375, 574, 741
ArsI	GACNNNNNNTTYG	2 cut(s)	1103, 1135
AseI	ATTAAT	1 cut(s)	675
AspLEI	GCGC	1 cut(s)	1096
AspS9I	GGNCC	4 cut(s)	35, 750, 761, 828
AsuHPI	GGTGA	3 cut(s)	422, 616, 664
AsuII	TTCGAA	1 cut(s)	745
AvaII	GGWCC	3 cut(s)	35, 761, 828
BaeGI	GKGCMC	1 cut(s)	975
BaeI	ACNNNNGTAYC	2 cut(s)	269, 302
BbvI	GCAGC	1 cut(s)	884
BccI	CCATC	6 cut(s)	649, 803, 859, 863, 962, 986
BciT130I	CCWGG	1 cut(s)	449
BcoDI	GTCTC	3 cut(s)	68, 267, 867
BfaI	CTAG	1 cut(s)	1062
BfrI	CTTAAG	1 cut(s)	703
BisI	GCNGC	1 cut(s)	898
BlsI	GCNGC	1 cut(s)	899
Bme1390I	CCNGG	1 cut(s)	449
Bme18I	GGWCC	3 cut(s)	35, 761, 828
BmgBI	CACGTC	1 cut(s)	340
BmgT120I	GGNCC	4 cut(s)	35, 750, 761, 828
BmiI	GGNNCC	1 cut(s)	763
BmrFI	CCNGG	1 cut(s)	449
BmsI	GCATC	4 cut(s)	355, 873, 904, 1081
Bpu14I	TTCGAA	1 cut(s)	745
BpuEI	CTTGAG	4 cut(s)	354, 420, 758, 947
BsaJI	CCNNGG	5 cut(s)	225, 382, 627, 643, 868
BsaWI	WCCGGW	1 cut(s)	830
Bsc4I	CCNNNNNNNGG	3 cut(s)	298, 649, 758
Bse118I	RCCGGY	1 cut(s)	41
Bse1I	ACTGG	2 cut(s)	937, 1028
Bse3DI	GCAATG	1 cut(s)	45
BseBI	CCWGG	1 cut(s)	449
BseDI	CCNNGG	5 cut(s)	225, 382, 627, 643, 868
BseGI	GGATG	5 cut(s)	19, 370, 851, 864, 973
BseLI	CCNNNNNNNGG	3 cut(s)	298, 649, 758
BseMI	GCAATG	1 cut(s)	45
BseMII	CTCAG	1 cut(s)	558
BseNI	ACTGG	2 cut(s)	937, 1028
BseSI	GKGCMC	1 cut(s)	975
BseXI	GCAGC	1 cut(s)	884
Bsh1236I	CGCG	1 cut(s)	1096
BshFI	GGCC	2 cut(s)	447, 751
BsiSI	CCGG	2 cut(s)	42, 831
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	3 cut(s)	298, 649, 758
BsmAI	GTCTC	3 cut(s)	68, 267, 867
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	2 cut(s)	475, 1002
BsnI	GGCC	2 cut(s)	447, 751
Bsp119I	TTCGAA	1 cut(s)	745
Bsp1286I	GDGCHC	1 cut(s)	975
Bsp143I	GATC	5 cut(s)	21, 142, 229, 822, 1129
BspACI	CCGC	2 cut(s)	70, 907
BspANI	GGCC	2 cut(s)	447, 751
BspCNI	CTCAG	1 cut(s)	557
BspFNI	CGCG	1 cut(s)	1096
BspLI	GGNNCC	1 cut(s)	763
BspPI	GGATC	2 cut(s)	237, 1137
BspT104I	TTCGAA	1 cut(s)	745
BspTI	CTTAAG	1 cut(s)	703
BsrDI	GCAATG	1 cut(s)	45
BsrFI	RCCGGY	1 cut(s)	41
BsrI	ACTGG	2 cut(s)	937, 1028
BssAI	RCCGGY	1 cut(s)	41
BssECI	CCNNGG	5 cut(s)	225, 382, 627, 643, 868
BssMI	GATC	5 cut(s)	21, 142, 229, 822, 1129
BssT1I	CCWWGG	5 cut(s)	225, 382, 627, 643, 868
Bst2UI	CCWGG	1 cut(s)	449
Bst4CI	ACNGT	4 cut(s)	293, 949, 1040, 1049
Bst6I	CTCTTC	1 cut(s)	986
BstAFI	CTTAAG	1 cut(s)	703
BstAPI	GCANNNNNTGC	1 cut(s)	56
BstBI	TTCGAA	1 cut(s)	745
BstC8I	GCNNGC	2 cut(s)	43, 179
BstDEI	CTNAG	1 cut(s)	544
BstF5I	GGATG	5 cut(s)	19, 370, 851, 864, 973
BstFNI	CGCG	1 cut(s)	1096
BstHHI	GCGC	1 cut(s)	1096
BstKTI	GATC	5 cut(s)	24, 145, 232, 825, 1132
BstMAI	GTCTC	3 cut(s)	68, 267, 867
BstMBI	GATC	5 cut(s)	21, 142, 229, 822, 1129
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 47, 56, 453, 906, 942, 958, 1116
BstNI	CCWGG	1 cut(s)	449
BstNSI	RCATGY	2 cut(s)	63, 620
BstSCI	CCNGG	1 cut(s)	447
BstSLI	GKGCMC	1 cut(s)	975
BstUI	CGCG	1 cut(s)	1096
BstV1I	GCAGC	1 cut(s)	884
BstXI	CCANNNNNNTGG	1 cut(s)	1023
BsuRI	GGCC	2 cut(s)	447, 751
BtrI	CACGTC	1 cut(s)	340
BtsCI	GGATG	5 cut(s)	19, 370, 851, 864, 973
BtsIMutI	CAGTG	1 cut(s)	945
Cac8I	GCNNGC	2 cut(s)	43, 179
CfoI	GCGC	1 cut(s)	1096
Cfr10I	RCCGGY	1 cut(s)	41
Cfr13I	GGNCC	4 cut(s)	35, 750, 761, 828
CseI	GACGC	1 cut(s)	326
Csp6I	GTAC	3 cut(s)	92, 286, 487
CviAII	CATG	5 cut(s)	60, 472, 550, 617, 1088
CviQI	GTAC	3 cut(s)	92, 286, 487
DdeI	CTNAG	1 cut(s)	544
DpnI	GATC	5 cut(s)	23, 144, 231, 824, 1131
DpnII	GATC	5 cut(s)	21, 142, 229, 822, 1129
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
Eam1104I	CTCTTC	1 cut(s)	986
EarI	CTCTTC	1 cut(s)	986
Eco130I	CCWWGG	5 cut(s)	225, 382, 627, 643, 868
Eco147I	AGGCCT	1 cut(s)	447
Eco47I	GGWCC	3 cut(s)	35, 761, 828
Eco57I	CTGAAG	1 cut(s)	170
EcoRI	GAATTC	1 cut(s)	741
EcoRII	CCWGG	1 cut(s)	447
EcoT14I	CCWWGG	5 cut(s)	225, 382, 627, 643, 868
EcoT22I	ATGCAT	1 cut(s)	477
ErhI	CCWWGG	5 cut(s)	225, 382, 627, 643, 868
FaeI	CATG	5 cut(s)	63, 475, 553, 620, 1091
FalI	AAGNNNNNCTT	2 cut(s)	143, 175
FaqI	GGGAC	1 cut(s)	206
FatI	CATG	5 cut(s)	59, 471, 549, 616, 1087
FauNDI	CATATG	1 cut(s)	189
FblI	GTMKAC	1 cut(s)	684
Fnu4HI	GCNGC	1 cut(s)	898
FokI	GGATG	5 cut(s)	26, 377, 838, 851, 980
Fsp4HI	GCNGC	1 cut(s)	898
FspBI	CTAG	1 cut(s)	1062
GlaI	GCGC	1 cut(s)	1095
GluI	GCNGC	1 cut(s)	898
HaeIII	GGCC	2 cut(s)	447, 751
HapII	CCGG	2 cut(s)	42, 831
HgaI	GACGC	1 cut(s)	326
HhaI	GCGC	1 cut(s)	1096
Hin1II	CATG	5 cut(s)	63, 475, 553, 620, 1091
Hin6I	GCGC	1 cut(s)	1094
HinP1I	GCGC	1 cut(s)	1094
HincII	GTYRAC	2 cut(s)	685, 817
HindII	GTYRAC	2 cut(s)	685, 817
HindIII	AAGCTT	1 cut(s)	152
HinfI	GANTC	1 cut(s)	251
HpaI	GTTAAC	1 cut(s)	817
HpaII	CCGG	2 cut(s)	42, 831
HphI	GGTGA	3 cut(s)	422, 616, 664
Hpy166II	GTNNAC	3 cut(s)	685, 761, 817
Hpy188I	TCNGA	3 cut(s)	150, 612, 1134
Hpy188III	TCNNGA	2 cut(s)	371, 826
Hpy8I	GTNNAC	3 cut(s)	685, 761, 817
Hpy99I	CGWCG	1 cut(s)	320
HpyAV	CCTTC	1 cut(s)	741
HpyCH4III	ACNGT	4 cut(s)	293, 949, 1040, 1049
HpyCH4IV	ACGT	3 cut(s)	87, 339, 690
HpyCH4V	TGCA	8 cut(s)	50, 59, 209, 404, 442, 475, 584, 900
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 47, 56, 453, 906, 942, 958, 1116
HpyF3I	CTNAG	1 cut(s)	544
HpySE526I	ACGT	3 cut(s)	87, 339, 690
Hsp92II	CATG	5 cut(s)	63, 475, 553, 620, 1091
HspAI	GCGC	1 cut(s)	1094
KroI	GCCGGC	1 cut(s)	41
KroNI	GCCGGC	1 cut(s)	43
KspAI	GTTAAC	1 cut(s)	817
Kzo9I	GATC	5 cut(s)	21, 142, 229, 822, 1129
LmnI	GCTCC	2 cut(s)	4, 810
Lsp1109I	GCAGC	1 cut(s)	884
LweI	GCATC	4 cut(s)	355, 873, 904, 1081
MaeI	CTAG	1 cut(s)	1062
MaeII	ACGT	3 cut(s)	87, 339, 690
MalI	GATC	5 cut(s)	23, 144, 231, 824, 1131
MboI	GATC	5 cut(s)	21, 142, 229, 822, 1129
MboII	GAAGA	4 cut(s)	116, 139, 973, 1045
MhlI	GDGCHC	1 cut(s)	975
MluCI	AATT	9 cut(s)	170, 375, 555, 574, 676, 710, 741, 836, 955
MnlI	CCTC	6 cut(s)	64, 210, 291, 415, 444, 455
Mph1103I	ATGCAT	1 cut(s)	477
MroNI	GCCGGC	1 cut(s)	41
MseI	TTAA	8 cut(s)	75, 270, 675, 704, 713, 816, 839, 1150
MspCI	CTTAAG	1 cut(s)	703
MspI	CCGG	2 cut(s)	42, 831
MspR9I	CCNGG	1 cut(s)	449
Mva1269I	GAATGC	2 cut(s)	475, 1002
MvaI	CCWGG	1 cut(s)	449
MvnI	CGCG	1 cut(s)	1096
MwoI	GCNNNNNNNGC	8 cut(s)	38, 47, 56, 453, 906, 942, 958, 1116
NaeI	GCCGGC	1 cut(s)	43
NdeI	CATATG	1 cut(s)	189
NdeII	GATC	5 cut(s)	21, 142, 229, 822, 1129
NgoMIV	GCCGGC	1 cut(s)	41
NlaIII	CATG	5 cut(s)	63, 475, 553, 620, 1091
NlaIV	GGNNCC	1 cut(s)	763
NsiI	ATGCAT	1 cut(s)	477
NspI	RCATGY	2 cut(s)	63, 620
NspV	TTCGAA	1 cut(s)	745
PceI	AGGCCT	1 cut(s)	447
PciI	ACATGT	1 cut(s)	616
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PctI	GAATGC	2 cut(s)	475, 1002
PdiI	GCCGGC	1 cut(s)	43
PfeI	GAWTC	1 cut(s)	251
PkrI	GCNGC	1 cut(s)	899
PscI	ACATGT	1 cut(s)	616
PshBI	ATTAAT	1 cut(s)	675
Psp1406I	AACGTT	2 cut(s)	87, 690
Psp6I	CCWGG	1 cut(s)	447
PspGI	CCWGG	1 cut(s)	447
PspN4I	GGNNCC	1 cut(s)	763
PspPI	GGNCC	4 cut(s)	35, 750, 761, 828
PsrI	GAACNNNNNNTAC	2 cut(s)	1028, 1060
RsaI	GTAC	3 cut(s)	93, 287, 488
RsaNI	GTAC	3 cut(s)	92, 286, 487
SalI	GTCGAC	1 cut(s)	683
SaqAI	TTAA	8 cut(s)	75, 270, 675, 704, 713, 816, 839, 1150
SatI	GCNGC	1 cut(s)	898
Sau3AI	GATC	5 cut(s)	21, 142, 229, 822, 1129
Sau96I	GGNCC	4 cut(s)	35, 750, 761, 828
ScrFI	CCNGG	1 cut(s)	449
SduI	GDGCHC	1 cut(s)	975
SfaNI	GCATC	4 cut(s)	355, 873, 904, 1081
SfuI	TTCGAA	1 cut(s)	745
SinI	GGWCC	3 cut(s)	35, 761, 828
SmlI	CTYRAG	5 cut(s)	369, 435, 703, 773, 962
SmoI	CTYRAG	5 cut(s)	369, 435, 703, 773, 962
Sse9I	AATT	9 cut(s)	170, 375, 555, 574, 676, 710, 741, 836, 955
SseBI	AGGCCT	1 cut(s)	447
SsiI	CCGC	2 cut(s)	70, 907
SspI	AATATT	1 cut(s)	79
SspMI	CTAG	1 cut(s)	1062
StuI	AGGCCT	1 cut(s)	447
StyD4I	CCNGG	1 cut(s)	447
StyI	CCWWGG	5 cut(s)	225, 382, 627, 643, 868
TaaI	ACNGT	4 cut(s)	293, 949, 1040, 1049
TaiI	ACGT	3 cut(s)	90, 342, 693
TaqI	TCGA	4 cut(s)	327, 684, 745, 882
TasI	AATT	9 cut(s)	170, 375, 555, 574, 676, 710, 741, 836, 955
TatI	WGTACW	1 cut(s)	91
TfiI	GAWTC	1 cut(s)	251
Tru1I	TTAA	8 cut(s)	75, 270, 675, 704, 713, 816, 839, 1150
Tru9I	TTAA	8 cut(s)	75, 270, 675, 704, 713, 816, 839, 1150
TscAI	CASTG	1 cut(s)	952
TseI	GCWGC	1 cut(s)	897
TspDTI	ATGAA	1 cut(s)	460
TspGWI	ACGGA	1 cut(s)	593
TspRI	CASTG	1 cut(s)	952
Vha464I	CTTAAG	1 cut(s)	703
VpaK11BI	GGWCC	3 cut(s)	35, 761, 828
VspI	ATTAAT	1 cut(s)	675
XapI	RAATTY	3 cut(s)	375, 574, 741
XceI	RCATGY	2 cut(s)	63, 620
XmiI	GTMKAC	1 cut(s)	684
XspI	CTAG	1 cut(s)	1062
Zsp2I	ATGCAT	1 cut(s)	477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.