RLG00000006243

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0005259
Physical Location & Seq
Forward (+)
5495494 .. 5497403
1910 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006243

Sequence Viewer

Length: 1155 bp
ATGGAGGAAGTAGAGGTAGTCATAGTAGGTGCAGGTCCTGCTGGTCTAGCAACCTCTGCATGTCTTAACCGCCTCAATATCTCAAATGTTGTACTCGAAAGAGAAGATTGCTATGCTTCTCTTTGGAAGAATGGGACATACGATCGTTTGAAGCTTCACTTAGCAAAGCAATTCTGTGAACTACCGTATATGCCTTTCCCTAAAAATGCACCCACATATGTTCCTAGGAAAGAGTTTATTCAATACTTGGATACTTATGTGTCCGCTTTCGAGATAAAACCTCTGTACAACAGAATTGTGAAGGCTGCTTTTTATGATGAGGCTGTGGAAAAATGGAGTGTCCTTGTCAACAACACAAAACAGGGTGTACAAGAAAGTTACTACGGGAAATCTCTTGTGGTTGCGACGGGAGAAAATAGTGAAGCCTATTTTCCTCAAACAAAAGGTTTGGGTAGCTTTAAAGGCGAAATCACTCATTCAAGTGAGTACGGAAATGGCCAGAAGTACTGTGGGAAAAATGTTTTAGTTGTTGGAGCTGGAAATTCCGGAATGGAAATTGCCTACGACTTATTAAATTTCGGCGCAAATACTTGTATTGTTGTCCGTACCCCGATACATGTTGTTACCAAGGAGATCATGTTCATTGGAATGGTTCTGTTAAAGTACCTTCCTGTTAAGGTTGTAGATGCCATTGTGATGTTCTTAACCAAATGGAAATTTGGAAATTTATCCAAGTATGGGATTCAAATTCCAAAAATGGGGCCATTTTATCTCAAGGAAGCCAAAGGTCGATCCCCCATCATCGATGTTGGGACCATCGAAAAGATCAAGAGTGGAGAGATACAGGTTTTGCCATCCATAGCAAGCATAGAAGGAAATGAAATCCGGTTTGAGAATGGCTACCTGAAATGTTATGATGCTATAGTATTTGCTACAGGCTATAAAAGCTCTGTGCTAAAGTGGCTTAAGGACGAAAACAACCTCTTTAATGACAATGGAATGCCGAAGAGAGGTTTCCCTAACCACTGGAAGTCACAAAATGGCCTTTACTGTGTTGGATTCTCAAGACGTGGATTATTTGGCATTTCACAAGATGCACAGAATATAACAAATGATATAATTTCCTCTCTCAATAAGAGCAAAAGAAGGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

385

Amino Acids

43.0

Weight (kDa)

9.04

Isoelectric Point (pI)

35.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_3 PF01494 3 - 36 8.9e-06 FAD binding domain
FMO-like PF00743 5 - 317 1.5e-22 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 5 - 207 8.2e-15 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 7 - 204 2.3e-20 Pyridine nucleotide-disulphide oxidoreductase
Lys_Orn_oxgnase PF13434 68 - 196 1.1e-13 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 23
AccIII TCCGGA 1 cut(s) 545
AciI CCGC 2 cut(s) 70, 264
AclWI GGATC 1 cut(s) 786
AcoI YGGCCR 1 cut(s) 496
AcsI RAATTY 5 cut(s) 541, 574, 716, 724, 747
AfaI GTAC 7 cut(s) 93, 287, 369, 488, 506, 607, 665
AfiI CCNNNNNNNGG 3 cut(s) 738, 758, 1010
AflII CTTAAG 1 cut(s) 965
AflIII ACRYGT 1 cut(s) 616
AgsI TTSAA 4 cut(s) 151, 242, 480, 746
AjiI CACGTC 1 cut(s) 1070
AloI GAACNNNNNNTCC 2 cut(s) 623, 655
AluBI AGCT 4 cut(s) 154, 456, 536, 948
AluI AGCT 4 cut(s) 154, 456, 536, 948
AlwI GGATC 1 cut(s) 786
AlwNI CAGNNNCTG 1 cut(s) 38
Aor13HI TCCGGA 1 cut(s) 545
AoxI GGCC 3 cut(s) 496, 761, 1042
ApeKI GCWGC 1 cut(s) 305
ApoI RAATTY 5 cut(s) 541, 574, 716, 724, 747
AspA2I CCTAGG 1 cut(s) 224
AspLEI GCGC 1 cut(s) 584
AspS9I GGNCC 3 cut(s) 35, 761, 813
AvaII GGWCC 2 cut(s) 35, 813
AvrII CCTAGG 1 cut(s) 224
BaeI ACNNNNGTAYC 2 cut(s) 243, 276
BalI TGGCCA 1 cut(s) 498
BbvI GCAGC 1 cut(s) 292
BccI CCATC 3 cut(s) 806, 824, 862
BciVI GTATCC 1 cut(s) 244
BfaI CTAG 2 cut(s) 47, 225
BfmI CTRYAG 2 cut(s) 921, 933
BfrI CTTAAG 1 cut(s) 965
BfuAI ACCTGC 1 cut(s) 23
BfuI GTATCC 1 cut(s) 244
BisI GCNGC 1 cut(s) 306
BlnI CCTAGG 1 cut(s) 224
BlsI GCNGC 1 cut(s) 307
BmcAI AGTACT 1 cut(s) 506
Bme18I GGWCC 2 cut(s) 35, 813
BmgBI CACGTC 1 cut(s) 1070
BmgT120I GGNCC 3 cut(s) 35, 761, 813
BmiI GGNNCC 2 cut(s) 762, 814
BmsI GCATC 3 cut(s) 676, 907, 1084
BpuEI CTTGAG 2 cut(s) 758, 1048
Bsa29I ATCGAT 1 cut(s) 804
BsaJI CCNNGG 2 cut(s) 224, 627
BsaWI WCCGGW 2 cut(s) 545, 885
BsaXI ACNNNNNCTCC 2 cut(s) 623, 653
Bsc4I CCNNNNNNNGG 3 cut(s) 738, 758, 1010
Bse1I ACTGG 1 cut(s) 1031
BseAI TCCGGA 1 cut(s) 545
BseCI ATCGAT 1 cut(s) 804
BseDI CCNNGG 2 cut(s) 224, 627
BseGI GGATG 1 cut(s) 854
BseLI CCNNNNNNNGG 3 cut(s) 738, 758, 1010
BseNI ACTGG 1 cut(s) 1031
BseXI GCAGC 1 cut(s) 292
BsgI GTGCAG 1 cut(s) 51
Bsh1285I CGRYCG 1 cut(s) 145
BshFI GGCC 3 cut(s) 498, 763, 1044
BshVI ATCGAT 1 cut(s) 804
BsiEI CGRYCG 1 cut(s) 145
BsiSI CCGG 2 cut(s) 546, 886
BslFI GGGAC 2 cut(s) 148, 826
BslI CCNNNNNNNGG 3 cut(s) 738, 758, 1010
BsmFI GGGAC 2 cut(s) 148, 826
BsmI GAATGC 1 cut(s) 1005
BsnI GGCC 3 cut(s) 498, 763, 1044
Bsp13I TCCGGA 1 cut(s) 545
Bsp1407I TGTACA 2 cut(s) 285, 367
Bsp143I GATC 4 cut(s) 142, 633, 791, 825
BspACI CCGC 2 cut(s) 70, 264
BspANI GGCC 3 cut(s) 498, 763, 1044
BspDI ATCGAT 1 cut(s) 804
BspEI TCCGGA 1 cut(s) 545
BspLI GGNNCC 2 cut(s) 762, 814
BspMI ACCTGC 1 cut(s) 23
BspPI GGATC 1 cut(s) 786
BspTI CTTAAG 1 cut(s) 965
BsrGI TGTACA 2 cut(s) 285, 367
BsrI ACTGG 1 cut(s) 1031
BssECI CCNNGG 2 cut(s) 224, 627
BssMI GATC 4 cut(s) 142, 633, 791, 825
BssT1I CCWWGG 2 cut(s) 224, 627
Bst4CI ACNGT 3 cut(s) 186, 509, 1052
Bst6I CTCTTC 1 cut(s) 1001
BstAFI CTTAAG 1 cut(s) 965
BstAPI GCANNNNNTGC 2 cut(s) 38, 56
BstAUI TGTACA 2 cut(s) 285, 367
BstC8I GCNNGC 1 cut(s) 865
BstDEI CTNAG 1 cut(s) 160
BstF5I GGATG 1 cut(s) 854
BstHHI GCGC 1 cut(s) 584
BstKTI GATC 4 cut(s) 145, 636, 794, 828
BstMBI GATC 4 cut(s) 142, 633, 791, 825
BstMCI CGRYCG 1 cut(s) 145
BstMWI GCNNNNNNNGC 6 cut(s) 38, 47, 56, 462, 945, 961
BstNSI RCATGY 2 cut(s) 63, 620
BstSFI CTRYAG 2 cut(s) 921, 933
BstV1I GCAGC 1 cut(s) 292
Bsu15I ATCGAT 1 cut(s) 804
BsuI GTATCC 1 cut(s) 244
BsuRI GGCC 3 cut(s) 498, 763, 1044
BsuTUI ATCGAT 1 cut(s) 804
BtrI CACGTC 1 cut(s) 1070
BtsCI GGATG 1 cut(s) 854
BtsIMutI CAGTG 1 cut(s) 1024
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 1 cut(s) 865
CaiI CAGNNNCTG 1 cut(s) 38
CfoI GCGC 1 cut(s) 584
Cfr13I GGNCC 3 cut(s) 35, 761, 813
ClaI ATCGAT 1 cut(s) 804
Csp6I GTAC 7 cut(s) 92, 286, 368, 487, 505, 606, 664
CviAII CATG 3 cut(s) 60, 617, 637
CviQI GTAC 7 cut(s) 92, 286, 368, 487, 505, 606, 664
DdeI CTNAG 1 cut(s) 160
DpnI GATC 4 cut(s) 144, 635, 793, 827
DpnII GATC 4 cut(s) 142, 633, 791, 825
DraI TTTAAA 1 cut(s) 460
EaeI YGGCCR 1 cut(s) 496
Eam1104I CTCTTC 1 cut(s) 1001
EarI CTCTTC 1 cut(s) 1001
Eco130I CCWWGG 2 cut(s) 224, 627
Eco47I GGWCC 2 cut(s) 35, 813
EcoO109I RGGNCCY 1 cut(s) 35
EcoT14I CCWWGG 2 cut(s) 224, 627
ErhI CCWWGG 2 cut(s) 224, 627
FaeI CATG 3 cut(s) 63, 620, 640
FalI AAGNNNNNCTT 2 cut(s) 143, 175
FaqI GGGAC 2 cut(s) 148, 826
FatI CATG 3 cut(s) 59, 616, 636
FauNDI CATATG 1 cut(s) 217
Fnu4HI GCNGC 1 cut(s) 306
FokI GGATG 1 cut(s) 841
Fsp4HI GCNGC 1 cut(s) 306
FspBI CTAG 2 cut(s) 47, 225
GlaI GCGC 1 cut(s) 583
GluI GCNGC 1 cut(s) 306
HaeIII GGCC 3 cut(s) 498, 763, 1044
HapII CCGG 2 cut(s) 546, 886
HhaI GCGC 1 cut(s) 584
Hin1II CATG 3 cut(s) 63, 620, 640
Hin6I GCGC 1 cut(s) 582
HinP1I GCGC 1 cut(s) 582
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 2 cut(s) 742, 1059
HpaII CCGG 2 cut(s) 546, 886
Hpy166II GTNNAC 3 cut(s) 179, 349, 368
Hpy188III TCNNGA 4 cut(s) 271, 546, 829, 1065
Hpy8I GTNNAC 3 cut(s) 179, 349, 368
Hpy99I CGWCG 1 cut(s) 409
HpyAV CCTTC 4 cut(s) 295, 677, 866, 1140
HpyCH4III ACNGT 3 cut(s) 186, 509, 1052
HpyCH4IV ACGT 1 cut(s) 1069
HpyCH4V TGCA 4 cut(s) 32, 59, 209, 1097
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 47, 56, 462, 945, 961
HpyF3I CTNAG 1 cut(s) 160
HpySE526I ACGT 1 cut(s) 1069
Hsp92II CATG 3 cut(s) 63, 620, 640
HspAI GCGC 1 cut(s) 582
Kpn2I TCCGGA 1 cut(s) 545
Kzo9I GATC 4 cut(s) 142, 633, 791, 825
LmnI GCTCC 1 cut(s) 533
Lsp1109I GCAGC 1 cut(s) 292
LweI GCATC 3 cut(s) 676, 907, 1084
MaeI CTAG 2 cut(s) 47, 225
MaeII ACGT 1 cut(s) 1069
MaeIII GTNAC 3 cut(s) 377, 622, 1032
MalI GATC 4 cut(s) 144, 635, 793, 827
MboI GATC 4 cut(s) 142, 633, 791, 825
MboII GAAGA 3 cut(s) 116, 139, 1018
MlsI TGGCCA 1 cut(s) 498
MluCI AATT 9 cut(s) 170, 294, 541, 555, 574, 716, 724, 747, 1119
MluNI TGGCCA 1 cut(s) 498
MmeI TCCRAC 2 cut(s) 511, 1036
MnlI CCTC 9 cut(s) 7, 64, 83, 291, 313, 444, 992, 1004, 1135
Mox20I TGGCCA 1 cut(s) 498
MroI TCCGGA 1 cut(s) 545
MscI TGGCCA 1 cut(s) 498
MseI TTAA 8 cut(s) 66, 459, 572, 659, 675, 704, 966, 987
MslI CAYNNNNRTG 3 cut(s) 480, 647, 695
Msp20I TGGCCA 1 cut(s) 498
MspCI CTTAAG 1 cut(s) 965
MspI CCGG 2 cut(s) 546, 886
Mva1269I GAATGC 1 cut(s) 1005
MwoI GCNNNNNNNGC 6 cut(s) 38, 47, 56, 462, 945, 961
NdeI CATATG 1 cut(s) 217
NdeII GATC 4 cut(s) 142, 633, 791, 825
NlaIII CATG 3 cut(s) 63, 620, 640
NlaIV GGNNCC 2 cut(s) 762, 814
NmuCI GTSAC 1 cut(s) 1032
NspI RCATGY 2 cut(s) 63, 620
PciI ACATGT 1 cut(s) 616
PctI GAATGC 1 cut(s) 1005
PfeI GAWTC 2 cut(s) 742, 1059
PkrI GCNGC 1 cut(s) 307
Ple19I CGATCG 1 cut(s) 145
PpuMI RGGWCCY 1 cut(s) 35
PscI ACATGT 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 35
PspN4I GGNNCC 2 cut(s) 762, 814
PspPI GGNCC 3 cut(s) 35, 761, 813
PspPPI RGGWCCY 1 cut(s) 35
PstNI CAGNNNCTG 1 cut(s) 38
PvuI CGATCG 1 cut(s) 145
RsaI GTAC 7 cut(s) 93, 287, 369, 488, 506, 607, 665
RsaNI GTAC 7 cut(s) 92, 286, 368, 487, 505, 606, 664
RseI CAYNNNNRTG 3 cut(s) 480, 647, 695
SaqAI TTAA 8 cut(s) 66, 459, 572, 659, 675, 704, 966, 987
SatI GCNGC 1 cut(s) 306
Sau3AI GATC 4 cut(s) 142, 633, 791, 825
Sau96I GGNCC 3 cut(s) 35, 761, 813
ScaI AGTACT 1 cut(s) 506
SfaNI GCATC 3 cut(s) 676, 907, 1084
SfcI CTRYAG 2 cut(s) 921, 933
SinI GGWCC 2 cut(s) 35, 813
SmiMI CAYNNNNRTG 3 cut(s) 480, 647, 695
SmlI CTYRAG 3 cut(s) 773, 965, 1063
SmoI CTYRAG 3 cut(s) 773, 965, 1063
Sse9I AATT 9 cut(s) 170, 294, 541, 555, 574, 716, 724, 747, 1119
SsiI CCGC 2 cut(s) 70, 264
SspMI CTAG 2 cut(s) 47, 225
StyI CCWWGG 2 cut(s) 224, 627
TaaI ACNGT 3 cut(s) 186, 509, 1052
TaiI ACGT 1 cut(s) 1072
TaqI TCGA 5 cut(s) 96, 270, 790, 804, 819
TasI AATT 9 cut(s) 170, 294, 541, 555, 574, 716, 724, 747, 1119
TatI WGTACW 4 cut(s) 91, 285, 367, 504
TfiI GAWTC 2 cut(s) 742, 1059
Tru1I TTAA 8 cut(s) 66, 459, 572, 659, 675, 704, 966, 987
Tru9I TTAA 8 cut(s) 66, 459, 572, 659, 675, 704, 966, 987
TscAI CASTG 1 cut(s) 1031
TseFI GTSAC 1 cut(s) 1032
TseI GCWGC 1 cut(s) 305
Tsp45I GTSAC 1 cut(s) 1032
TspDTI ATGAA 2 cut(s) 631, 894
TspGWI ACGGA 2 cut(s) 504, 593
TspRI CASTG 1 cut(s) 1031
Vha464I CTTAAG 1 cut(s) 965
VpaK11BI GGWCC 2 cut(s) 35, 813
XapI RAATTY 5 cut(s) 541, 574, 716, 724, 747
XceI RCATGY 2 cut(s) 63, 620
XcmI CCANNNNNNNNNTGG 1 cut(s) 506
XmaJI CCTAGG 1 cut(s) 224
XspI CTAG 2 cut(s) 47, 225
ZrmI AGTACT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.