Prupe.8G244000_v2.0.a1

DUF21 domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21264466 .. 21268460
3995 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G244000.1

Sequence Viewer

Length: 1308 bp
ATGTCCGGGCTCACCTTGGGCTTGATGTCTCTCAATCTCGTCGACCTCGAGATCCTGCAGCGGAGCGGGAGCGCCACCGAGAAGAAGCAAGCTGCTAAGATATTACCTGTTGTGCAAAAGCAGCACCAGCTTTTGGTCACTTTGCTTCTCTGCAATGCTTGTGCCATGGAGGCGCTTCCTTTGTATCTTGATAAAATCTTTCACCCCTTTGTTGCTGTTGTGCTGTCTGTAACATTTGTTCTGTTATTTGGAGAGATTATCCCACAATCAATATGCTCAAGATATGGACTTTCTGTTGGTGCCAATTTCGTTTGGCTTGTTCGCATTTTGATGTGCATCTGTTATCCAATTGCGTACCCAATTGCCAAGGTTCTGGATGCTGTACTTGGTCATAGTGATGATTTGTTTAGGCGAGCACAGTTGAAAGCCCTAGTCTCTATTCACGGCAAAGAGGCTGGTAAGGGAGGTGAACTCACGCATGATGAGACAACAATCATCAGTGGAGCGCTAGATTTAACTGAAAAGACTGCAGAGGAGGCTATGACGCCTATTGAATCAACTTTTTCCTTGGATGTAAATTCAAATTTAGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGTCATAGTCGAGTTCCTGTCTATTATGGAAATCCAAGAAACATTATTGGCCTCCTACTGGTGAAAAATCTTCTCACAGTACGAGCAGAAACGGAGACTCCAGTCAGTGCTGTTTCCATTCGAAGAATTCCCAGGGTTCCTGCAGATATGCCTCTGTATGATATACTTAATGAGTTTCAAAAAGGAAGCAGTCACCTGGCGGCTGTAGTGAAAATCAAAGGAAAGAACAAGAACCTTTTGCCAACTGCTGACAAAGAGAAATTTGAAGAGGATAAACTGTCCCATGAAAAATCTCAATTAGTTGCCTCCTTGCTAAGCAAGCATGATGACAAATCAGGGAGTGTTGTTGTCAACATCGATAAATCTCCAAAGTCTCTGACAAACAAGCCAACTGAGGATATTGAAGATGGGGATGTCATTGGAATCATCACCCTGGAGGATGTTTTTGAAGAACTTCTGCAAGAGGAGATTGTAGATGAAACAGATGTATATATCGATGTACATAGGAGGATACGTGTGGCTGCTGTGGCAGCTGCTTCATCCATGGCACGAGGTCCATCAAGTCGGAAGTTGCTTGCAGGACTAACTGAGCATGGACAAACCCCAAAGAAGTCCGCAGAAGATGATGCACATTCGGTGAGGTATTCAGGGAATCCTCGGGAGCCTCTTCTAGGCAACAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

436

Amino Acids

47.65

Weight (kDa)

6.21

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 299
AccB7I CCANNNNNTGG 1 cut(s) 133
AccBSI CCGCTC 1 cut(s) 66
AccI GTMKAC 1 cut(s) 42
AciI CCGC 4 cut(s) 61, 66, 821, 1236
AclWI GGATC 1 cut(s) 46
AcsI RAATTY 5 cut(s) 577, 583, 609, 747, 881
AcyI GRCGYC 1 cut(s) 545
AfaI GTAC 4 cut(s) 356, 384, 702, 1122
AfeI AGCGCT 1 cut(s) 507
AfiI CCNNNNNNNGG 3 cut(s) 133, 679, 1292
AflIII ACRYGT 1 cut(s) 1135
AgsI TTSAA 7 cut(s) 424, 554, 582, 800, 887, 1025, 1070
AjnI CCWGG 3 cut(s) 752, 816, 1053
AluBI AGCT 3 cut(s) 92, 130, 1154
AluI AGCT 3 cut(s) 92, 130, 1154
Alw21I GWGCWC 1 cut(s) 418
Alw26I GTCTC 5 cut(s) 33, 439, 479, 710, 999
AlwI GGATC 1 cut(s) 46
Ama87I CYCGRG 2 cut(s) 47, 1278
Aor51HI AGCGCT 1 cut(s) 507
AoxI GGCC 1 cut(s) 670
ApeKI GCWGC 6 cut(s) 58, 92, 121, 1142, 1151, 1154
ApoI RAATTY 5 cut(s) 577, 583, 609, 747, 881
Asp700I GAANNNNTTC 1 cut(s) 1074
AspLEI GCGC 3 cut(s) 74, 175, 508
AspS9I GGNCC 1 cut(s) 1175
AsuC2I CCSGG 1 cut(s) 7
AsuHPI GGTGA 7 cut(s) 4, 194, 479, 694, 806, 1042, 1270
AsuII TTCGAA 1 cut(s) 742
AvaI CYCGRG 2 cut(s) 47, 1278
AvaII GGWCC 1 cut(s) 1175
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 12
BauI CACGAG 2 cut(s) 618, 1170
Bbv12I GWGCWC 1 cut(s) 418
BbvI GCAGC 6 cut(s) 70, 79, 133, 1129, 1141, 1163
BccI CCATC 2 cut(s) 1022, 1186
BceAI ACGGC 1 cut(s) 460
BciT130I CCWGG 3 cut(s) 754, 818, 1055
BciVI GTATCC 1 cut(s) 1125
BcnI CCSGG 1 cut(s) 7
BcoDI GTCTC 5 cut(s) 33, 439, 479, 710, 999
BfaI CTAG 3 cut(s) 431, 509, 1292
BfmI CTRYAG 4 cut(s) 56, 528, 762, 825
BfoI RGCGCY 3 cut(s) 75, 176, 509
BfuI GTATCC 1 cut(s) 1125
BglI GCCNNNNNGGC 1 cut(s) 170
BisI GCNGC 7 cut(s) 59, 93, 122, 822, 1143, 1152, 1155
BlpI GCTNAGC 1 cut(s) 935
BlsI GCNGC 7 cut(s) 60, 94, 123, 823, 1144, 1153, 1156
Bme1390I CCNGG 4 cut(s) 7, 754, 818, 1055
Bme18I GGWCC 1 cut(s) 1175
BmeT110I CYCGRG 2 cut(s) 47, 1278
BmgT120I GGNCC 1 cut(s) 1175
BmiI GGNNCC 3 cut(s) 301, 759, 1284
BmrFI CCNGG 4 cut(s) 7, 754, 818, 1055
BmrI ACTGGG 1 cut(s) 601
BmsI GCATC 3 cut(s) 345, 367, 1237
BmuI ACTGGG 1 cut(s) 601
BoxI GACNNNNGTC 1 cut(s) 722
BplI GAGNNNNNCTC 2 cut(s) 456, 488
BpmI CTGGAG 2 cut(s) 705, 1076
Bpu1102I GCTNAGC 1 cut(s) 935
Bpu14I TTCGAA 1 cut(s) 742
BpuEI CTTGAG 1 cut(s) 262
BpuMI CCSGG 1 cut(s) 7
Bsa29I ATCGAT 2 cut(s) 978, 1116
BsaAI YACGTR 1 cut(s) 1136
BsaBI GATNNNNATC 1 cut(s) 335
BsaHI GRCGYC 1 cut(s) 545
BsaJI CCNNGG 9 cut(s) 15, 165, 366, 567, 752, 753, 1053, 1164, 1277
BsaXI ACNNNNNCTCC 4 cut(s) 703, 733, 1120, 1150
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 679, 1292
Bse1I ACTGG 3 cut(s) 596, 684, 722
Bse3DI GCAATG 1 cut(s) 160
Bse8I GATNNNNATC 1 cut(s) 335
BseBI CCWGG 3 cut(s) 754, 818, 1055
BseCI ATCGAT 2 cut(s) 978, 1116
BseDI CCNNGG 9 cut(s) 15, 165, 366, 567, 752, 753, 1053, 1164, 1277
BseGI GGATG 5 cut(s) 382, 577, 1039, 1066, 1160
BseJI GATNNNNATC 1 cut(s) 335
BseLI CCNNNNNNNGG 3 cut(s) 133, 679, 1292
BseMI GCAATG 1 cut(s) 160
BseMII CTCAG 2 cut(s) 1005, 1200
BseNI ACTGG 3 cut(s) 596, 684, 722
BseRI GAGGAG 2 cut(s) 548, 1100
BseXI GCAGC 6 cut(s) 70, 79, 133, 1129, 1141, 1163
BshFI GGCC 1 cut(s) 672
BshNI GGYRCC 1 cut(s) 299
BshVI ATCGAT 2 cut(s) 978, 1116
BsiHKAI GWGCWC 1 cut(s) 418
BsiHKCI CYCGRG 2 cut(s) 47, 1278
BsiSI CCGG 1 cut(s) 6
BslFI GGGAC 1 cut(s) 886
BslI CCNNNNNNNGG 3 cut(s) 133, 679, 1292
BsmAI GTCTC 5 cut(s) 33, 439, 479, 710, 999
BsmFI GGGAC 1 cut(s) 886
BsnI GGCC 1 cut(s) 672
BsoBI CYCGRG 2 cut(s) 47, 1278
Bsp119I TTCGAA 1 cut(s) 742
Bsp1286I GDGCHC 2 cut(s) 12, 418
Bsp1407I TGTACA 1 cut(s) 1120
Bsp143I GATC 1 cut(s) 51
Bsp1720I GCTNAGC 1 cut(s) 935
Bsp19I CCATGG 2 cut(s) 165, 1164
BspACI CCGC 4 cut(s) 61, 66, 821, 1236
BspANI GGCC 1 cut(s) 672
BspCNI CTCAG 2 cut(s) 1006, 1201
BspDI ATCGAT 2 cut(s) 978, 1116
BspLI GGNNCC 3 cut(s) 301, 759, 1284
BspMAI CTGCAG 3 cut(s) 60, 532, 766
BspPI GGATC 1 cut(s) 46
BspT104I TTCGAA 1 cut(s) 742
BspT107I GGYRCC 1 cut(s) 299
BsrBI CCGCTC 1 cut(s) 66
BsrDI GCAATG 1 cut(s) 160
BsrGI TGTACA 1 cut(s) 1120
BsrI ACTGG 3 cut(s) 596, 684, 722
BssECI CCNNGG 9 cut(s) 15, 165, 366, 567, 752, 753, 1053, 1164, 1277
BssMI GATC 1 cut(s) 51
BssNI GRCGYC 1 cut(s) 545
BssSI CACGAG 2 cut(s) 618, 1170
BssT1I CCWWGG 5 cut(s) 15, 165, 366, 567, 1164
Bst2BI CACGAG 2 cut(s) 618, 1170
Bst2UI CCWGG 3 cut(s) 754, 818, 1055
Bst4CI ACNGT 3 cut(s) 420, 700, 900
Bst6I CTCTTC 2 cut(s) 882, 1293
BstACI GRCGYC 1 cut(s) 545
BstAUI TGTACA 1 cut(s) 1120
BstBAI YACGTR 1 cut(s) 1136
BstBI TTCGAA 1 cut(s) 742
BstC8I GCNNGC 4 cut(s) 90, 414, 941, 1197
BstDEI CTNAG 4 cut(s) 96, 935, 1014, 1209
BstDSI CCRYGG 2 cut(s) 165, 1164
BstENI CCTNNNNNAGG 1 cut(s) 1290
BstF5I GGATG 5 cut(s) 382, 577, 1039, 1066, 1160
BstH2I RGCGCY 3 cut(s) 75, 176, 509
BstHHI GCGC 3 cut(s) 74, 175, 508
BstKTI GATC 1 cut(s) 54
BstMAI GTCTC 5 cut(s) 33, 439, 479, 710, 999
BstMBI GATC 1 cut(s) 51
BstMWI GCNNNNNNNGC 7 cut(s) 121, 127, 170, 536, 940, 1148, 1151
BstNI CCWGG 3 cut(s) 754, 818, 1055
BstPAI GACNNNNGTC 1 cut(s) 722
BstSCI CCNGG 4 cut(s) 5, 752, 816, 1053
BstSFI CTRYAG 4 cut(s) 56, 528, 762, 825
BstV1I GCAGC 6 cut(s) 70, 79, 133, 1129, 1141, 1163
BstX2I RGATCY 1 cut(s) 51
BstXI CCANNNNNNTGG 1 cut(s) 373
BstYI RGATCY 1 cut(s) 51
Bsu15I ATCGAT 2 cut(s) 978, 1116
BsuI GTATCC 1 cut(s) 1125
BsuRI GGCC 1 cut(s) 672
BsuTUI ATCGAT 2 cut(s) 978, 1116
BtgI CCRYGG 2 cut(s) 165, 1164
BtsCI GGATG 5 cut(s) 382, 577, 1039, 1066, 1160
BtsIMutI CAGTG 2 cut(s) 505, 733
Cac8I GCNNGC 4 cut(s) 90, 414, 941, 1197
CfoI GCGC 3 cut(s) 74, 175, 508
Cfr13I GGNCC 1 cut(s) 1175
ClaI ATCGAT 2 cut(s) 978, 1116
CseI GACGC 1 cut(s) 553
Csp6I GTAC 4 cut(s) 355, 383, 701, 1121
CviAII CATG 6 cut(s) 166, 479, 905, 944, 1165, 1214
CviQI GTAC 4 cut(s) 355, 383, 701, 1121
DdeI CTNAG 4 cut(s) 96, 935, 1014, 1209
DpnI GATC 1 cut(s) 53
DpnII GATC 1 cut(s) 51
Eam1104I CTCTTC 2 cut(s) 882, 1293
EarI CTCTTC 2 cut(s) 882, 1293
Eco130I CCWWGG 5 cut(s) 15, 165, 366, 567, 1164
Eco24I GRGCYC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 1175
Eco47III AGCGCT 1 cut(s) 507
Eco88I CYCGRG 2 cut(s) 47, 1278
EcoNI CCTNNNNNAGG 1 cut(s) 1290
EcoRI GAATTC 1 cut(s) 747
EcoRII CCWGG 3 cut(s) 752, 816, 1053
EcoT14I CCWWGG 5 cut(s) 15, 165, 366, 567, 1164
EcoT38I GRGCYC 1 cut(s) 12
ErhI CCWWGG 5 cut(s) 15, 165, 366, 567, 1164
FaeI CATG 6 cut(s) 169, 482, 908, 947, 1168, 1217
FaqI GGGAC 1 cut(s) 886
FatI CATG 6 cut(s) 165, 478, 904, 943, 1164, 1213
FauI CCCGC 1 cut(s) 59
FblI GTMKAC 1 cut(s) 42
Fnu4HI GCNGC 7 cut(s) 59, 93, 122, 822, 1143, 1152, 1155
FokI GGATG 5 cut(s) 389, 584, 1046, 1073, 1147
FriOI GRGCYC 1 cut(s) 12
Fsp4HI GCNGC 7 cut(s) 59, 93, 122, 822, 1143, 1152, 1155
FspBI CTAG 3 cut(s) 431, 509, 1292
GlaI GCGC 3 cut(s) 73, 174, 507
GluI GCNGC 7 cut(s) 59, 93, 122, 822, 1143, 1152, 1155
GsuI CTGGAG 2 cut(s) 705, 1076
HaeII RGCGCY 3 cut(s) 75, 176, 509
HaeIII GGCC 1 cut(s) 672
HapII CCGG 1 cut(s) 6
HgaI GACGC 1 cut(s) 553
HhaI GCGC 3 cut(s) 74, 175, 508
Hin1I GRCGYC 1 cut(s) 545
Hin1II CATG 6 cut(s) 169, 482, 908, 947, 1168, 1217
Hin6I GCGC 3 cut(s) 72, 173, 506
HinP1I GCGC 3 cut(s) 72, 173, 506
HincII GTYRAC 2 cut(s) 43, 973
HindII GTYRAC 2 cut(s) 43, 973
HinfI GANTC 4 cut(s) 554, 718, 1044, 1273
HpaII CCGG 1 cut(s) 6
HphI GGTGA 7 cut(s) 4, 194, 479, 694, 806, 1042, 1270
Hpy166II GTNNAC 3 cut(s) 43, 470, 973
Hpy188I TCNGA 2 cut(s) 999, 1188
Hpy188III TCNNGA 5 cut(s) 49, 188, 279, 374, 1280
Hpy8I GTNNAC 3 cut(s) 43, 470, 973
Hpy99I CGWCG 1 cut(s) 44
HpyCH4III ACNGT 3 cut(s) 420, 700, 900
HpyCH4IV ACGT 1 cut(s) 1135
HpyF10VI GCNNNNNNNGC 7 cut(s) 121, 127, 170, 536, 940, 1148, 1151
HpyF3I CTNAG 4 cut(s) 96, 935, 1014, 1209
HpySE526I ACGT 1 cut(s) 1135
Hsp92I GRCGYC 1 cut(s) 545
Hsp92II CATG 6 cut(s) 169, 482, 908, 947, 1168, 1217
HspAI GCGC 3 cut(s) 72, 173, 506
Kzo9I GATC 1 cut(s) 51
LmnI GCTCC 4 cut(s) 63, 69, 503, 1282
Lsp1109I GCAGC 6 cut(s) 70, 79, 133, 1129, 1141, 1163
LweI GCATC 3 cut(s) 345, 367, 1237
MaeI CTAG 3 cut(s) 431, 509, 1292
MaeII ACGT 1 cut(s) 1135
MaeIII GTNAC 3 cut(s) 136, 229, 812
MalI GATC 1 cut(s) 53
MbiI CCGCTC 1 cut(s) 66
MboI GATC 1 cut(s) 51
MboII GAAGA 8 cut(s) 94, 683, 756, 899, 1037, 1082, 1253, 1280
MfeI CAATTG 3 cut(s) 348, 360, 600
MflI RGATCY 1 cut(s) 51
MhlI GDGCHC 2 cut(s) 12, 418
MlyI GAGTC 1 cut(s) 712
MmeI TCCRAC 1 cut(s) 1166
MroXI GAANNNNTTC 1 cut(s) 1074
MseI TTAA 2 cut(s) 515, 789
MslI CAYNNNNRTG 2 cut(s) 329, 396
MspA1I CMGCKG 2 cut(s) 61, 1154
MspI CCGG 1 cut(s) 6
MspR9I CCNGG 4 cut(s) 7, 754, 818, 1055
MunI CAATTG 3 cut(s) 348, 360, 600
MvaI CCWGG 3 cut(s) 754, 818, 1055
MwoI GCNNNNNNNGC 7 cut(s) 121, 127, 170, 536, 940, 1148, 1151
NciI CCSGG 1 cut(s) 7
NcoI CCATGG 2 cut(s) 165, 1164
NdeII GATC 1 cut(s) 51
NlaIII CATG 6 cut(s) 169, 482, 908, 947, 1168, 1217
NlaIV GGNNCC 3 cut(s) 301, 759, 1284
NmuCI GTSAC 2 cut(s) 136, 812
NspV TTCGAA 1 cut(s) 742
PaeR7I CTCGAG 1 cut(s) 47
PasI CCCWGGG 1 cut(s) 753
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PdmI GAANNNNTTC 1 cut(s) 1074
PfeI GAWTC 3 cut(s) 554, 1044, 1273
PflMI CCANNNNNTGG 1 cut(s) 133
PkrI GCNGC 7 cut(s) 60, 94, 123, 823, 1144, 1153, 1156
PleI GAGTC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 712
Ppu21I YACGTR 1 cut(s) 1136
PshAI GACNNNNGTC 1 cut(s) 722
Psp6I CCWGG 3 cut(s) 752, 816, 1053
PspGI CCWGG 3 cut(s) 752, 816, 1053
PspN4I GGNNCC 3 cut(s) 301, 759, 1284
PspPI GGNCC 1 cut(s) 1175
PsrI GAACNNNNNNTAC 2 cut(s) 222, 254
PstI CTGCAG 3 cut(s) 60, 532, 766
PsuI RGATCY 1 cut(s) 51
PvuII CAGCTG 1 cut(s) 1154
RsaI GTAC 4 cut(s) 356, 384, 702, 1122
RsaNI GTAC 4 cut(s) 355, 383, 701, 1121
RseI CAYNNNNRTG 2 cut(s) 329, 396
SalI GTCGAC 1 cut(s) 41
SaqAI TTAA 2 cut(s) 515, 789
SatI GCNGC 7 cut(s) 59, 93, 122, 822, 1143, 1152, 1155
Sau3AI GATC 1 cut(s) 51
Sau96I GGNCC 1 cut(s) 1175
SchI GAGTC 1 cut(s) 712
ScrFI CCNGG 4 cut(s) 7, 754, 818, 1055
SduI GDGCHC 2 cut(s) 12, 418
SfaNI GCATC 3 cut(s) 345, 367, 1237
SfcI CTRYAG 4 cut(s) 56, 528, 762, 825
Sfr274I CTCGAG 1 cut(s) 47
SfuI TTCGAA 1 cut(s) 742
SinI GGWCC 1 cut(s) 1175
SlaI CTCGAG 1 cut(s) 47
SmiMI CAYNNNNRTG 2 cut(s) 329, 396
SmlI CTYRAG 2 cut(s) 47, 277
SmoI CTYRAG 2 cut(s) 47, 277
SsiI CCGC 4 cut(s) 61, 66, 821, 1236
SspMI CTAG 3 cut(s) 431, 509, 1292
StyD4I CCNGG 4 cut(s) 5, 752, 816, 1053
StyI CCWWGG 5 cut(s) 15, 165, 366, 567, 1164
TaaI ACNGT 3 cut(s) 420, 700, 900
TaiI ACGT 1 cut(s) 1138
TaqI TCGA 6 cut(s) 42, 48, 631, 742, 978, 1116
TatI WGTACW 2 cut(s) 382, 1120
TauI GCSGC 1 cut(s) 824
TfiI GAWTC 3 cut(s) 554, 1044, 1273
Tru1I TTAA 2 cut(s) 515, 789
Tru9I TTAA 2 cut(s) 515, 789
TscAI CASTG 2 cut(s) 505, 733
TseFI GTSAC 2 cut(s) 136, 812
TseI GCWGC 6 cut(s) 58, 92, 121, 1142, 1151, 1154
Tsp45I GTSAC 2 cut(s) 136, 812
TspDTI ATGAA 3 cut(s) 921, 1113, 1149
TspGWI ACGGA 1 cut(s) 728
TspRI CASTG 2 cut(s) 505, 733
Van91I CCANNNNNTGG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 1175
XagI CCTNNNNNAGG 1 cut(s) 1290
XapI RAATTY 5 cut(s) 577, 583, 609, 747, 881
XhoI CTCGAG 1 cut(s) 47
XmiI GTMKAC 1 cut(s) 42
XmnI GAANNNNTTC 1 cut(s) 1074
XspI CTAG 3 cut(s) 431, 509, 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.