pycom02g10390

Gibberellin-regulated protein 11-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
7210898 .. 7211532
635 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10390.3

Sequence Viewer

Length: 321 bp
ATGGCTTTGTCATCAAGAACGCTCATGGCTTCCATGCTTGTCTCTTTTATGCTTCTTCAATGTTTCATTGAAGCAGCTGATCACCAGTATGAGATGTTGGGCGTTGATGGAGCACCGAGCCCCAAGCCTCCAACTTTAGATTGTGGAGTGGCATGTGAAGGAAGATGCAAGCTATCATCGAGGCCTCGTCTTTGCAAAAGGGCATGTGGGAGTTGTTGTGACAAGTGCAGTTGCGTTCCTCCAGGCACTTCTGGCAACTACGAATCTTGTCCTTGCTACTTTAACCTCAAAACCCACAACCAAACCCGCAAGTGCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

11.51

Weight (kDa)

8.44

Isoelectric Point (pI)

58.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 307
AgsI TTSAA 2 cut(s) 59, 71
AjnI CCWGG 1 cut(s) 241
AluBI AGCT 2 cut(s) 77, 172
AluI AGCT 2 cut(s) 77, 172
Alw21I GWGCWC 1 cut(s) 115
Alw26I GTCTC 1 cut(s) 46
AoxI GGCC 1 cut(s) 182
ApeKI GCWGC 1 cut(s) 74
AsuHPI GGTGA 1 cut(s) 74
BaeGI GKGCMC 1 cut(s) 317
BanII GRGCYC 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 115
BbvI GCAGC 1 cut(s) 86
BccI CCATC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 243
BclI TGATCA 1 cut(s) 79
BcoDI GTCTC 1 cut(s) 46
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
Bme1390I CCNGG 1 cut(s) 243
BmrFI CCNGG 1 cut(s) 243
BmsI GCATC 1 cut(s) 155
BpmI CTGGAG 1 cut(s) 225
BsaXI ACNNNNNCTCC 2 cut(s) 202, 232
Bse1I ACTGG 1 cut(s) 85
BseBI CCWGG 1 cut(s) 243
BseNI ACTGG 1 cut(s) 85
BseSI GKGCMC 1 cut(s) 317
BseXI GCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 247
BshFI GGCC 1 cut(s) 184
BsiHKAI GWGCWC 1 cut(s) 115
BsmAI GTCTC 1 cut(s) 46
BsnI GGCC 1 cut(s) 184
Bsp1286I GDGCHC 3 cut(s) 115, 122, 317
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 1 cut(s) 307
BspANI GGCC 1 cut(s) 184
BsrI ACTGG 1 cut(s) 85
BssMI GATC 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 243
BstC8I GCNNGC 1 cut(s) 170
BstKTI GATC 1 cut(s) 82
BstMAI GTCTC 1 cut(s) 46
BstMBI GATC 1 cut(s) 79
BstMWI GCNNNNNNNGC 1 cut(s) 252
BstNI CCWGG 1 cut(s) 243
BstNSI RCATGY 2 cut(s) 156, 207
BstSCI CCNGG 1 cut(s) 241
BstSLI GKGCMC 1 cut(s) 317
BstV1I GCAGC 1 cut(s) 86
BsuRI GGCC 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 170
CviAII CATG 4 cut(s) 25, 34, 153, 204
CviJI RGCY 7 cut(s) 5, 29, 77, 120, 127, 172, 184
CviKI_1 RGCY 7 cut(s) 5, 29, 77, 120, 127, 172, 184
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
Eco147I AGGCCT 1 cut(s) 184
Eco24I GRGCYC 1 cut(s) 122
EcoRII CCWGG 1 cut(s) 241
EcoT38I GRGCYC 1 cut(s) 122
FaeI CATG 4 cut(s) 28, 37, 156, 207
FaiI YATR 6 cut(s) 26, 35, 50, 90, 154, 205
FatI CATG 4 cut(s) 24, 33, 152, 203
FauI CCCGC 1 cut(s) 314
FbaI TGATCA 1 cut(s) 79
Fnu4HI GCNGC 1 cut(s) 75
FriOI GRGCYC 1 cut(s) 122
Fsp4HI GCNGC 1 cut(s) 75
GluI GCNGC 1 cut(s) 75
GsuI CTGGAG 1 cut(s) 225
HaeIII GGCC 1 cut(s) 184
Hin1II CATG 4 cut(s) 28, 37, 156, 207
HinfI GANTC 1 cut(s) 263
HphI GGTGA 1 cut(s) 74
Hpy188III TCNNGA 1 cut(s) 15
HpyAV CCTTC 1 cut(s) 152
HpyCH4V TGCA 3 cut(s) 168, 195, 228
HpyF10VI GCNNNNNNNGC 1 cut(s) 252
Hsp92II CATG 4 cut(s) 28, 37, 156, 207
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 1 cut(s) 79
LmnI GCTCC 1 cut(s) 110
LpnPI CCDG 4 cut(s) 98, 228, 237, 255
Lsp1109I GCAGC 1 cut(s) 86
LweI GCATC 1 cut(s) 155
MaeIII GTNAC 1 cut(s) 218
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MboII GAAGA 2 cut(s) 47, 174
MhlI GDGCHC 3 cut(s) 115, 122, 317
MmeI TCCRAC 1 cut(s) 155
MnlI CCTC 5 cut(s) 138, 174, 195, 249, 296
MseI TTAA 2 cut(s) 282, 319
MslI CAYNNNNRTG 1 cut(s) 87
MspA1I CMGCKG 1 cut(s) 77
MspR9I CCNGG 1 cut(s) 243
MvaI CCWGG 1 cut(s) 243
MwoI GCNNNNNNNGC 1 cut(s) 252
NdeII GATC 1 cut(s) 79
NlaIII CATG 4 cut(s) 28, 37, 156, 207
NmuCI GTSAC 1 cut(s) 218
NspI RCATGY 2 cut(s) 156, 207
PceI AGGCCT 1 cut(s) 184
PfeI GAWTC 1 cut(s) 263
PkrI GCNGC 1 cut(s) 76
Psp6I CCWGG 1 cut(s) 241
PspGI CCWGG 1 cut(s) 241
PvuII CAGCTG 1 cut(s) 77
RseI CAYNNNNRTG 1 cut(s) 87
SaqAI TTAA 2 cut(s) 282, 319
SatI GCNGC 1 cut(s) 75
Sau3AI GATC 1 cut(s) 79
ScrFI CCNGG 1 cut(s) 243
SduI GDGCHC 3 cut(s) 115, 122, 317
SetI ASST 3 cut(s) 79, 174, 288
SfaNI GCATC 1 cut(s) 155
SmiMI CAYNNNNRTG 1 cut(s) 87
SseBI AGGCCT 1 cut(s) 184
SsiI CCGC 1 cut(s) 307
StuI AGGCCT 1 cut(s) 184
StyD4I CCNGG 1 cut(s) 241
TaqI TCGA 1 cut(s) 179
TfiI GAWTC 1 cut(s) 263
Tru1I TTAA 2 cut(s) 282, 319
Tru9I TTAA 2 cut(s) 282, 319
TseFI GTSAC 1 cut(s) 218
TseI GCWGC 1 cut(s) 74
Tsp45I GTSAC 1 cut(s) 218
TspDTI ATGAA 1 cut(s) 55
XceI RCATGY 2 cut(s) 156, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.