pycom02g11790

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0003684
Physical Location & Seq
Reverse (-)
8354184 .. 8360349
6166 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2877 bp
ATGAATCTCAAACTTGTAGCTCACGTCATCAACTCAATTAATACAAGGCACACACGTGTCAAAACACCATTGGAAACTCAACCGACCCCATATAAGTCCCTGGCCCAGAAGACTAAAAAACTACGGACGGCCATTAACTACTCTCAGGTTCAAGTTCAAAGCAGCGATCGATCTCCGGCGGTTTCTGGCGGCTACGACGAAATGGCGATTTCTGAGGGAAGTGAGGAGTTTACCATCATTGATAAATGCAATTCTGATTATTCTGAGGAAGAAAAACTTTTCGATGACTGTGGACAAGAAGAATATATGCGTGATCTATCTCCGGATCATTTGGTGAAAATTGAGGATGGCTGTGGATACGATGCGTTTCACGGATATCGCAACAAAAGGATTGCTCCTGTACTTGAAATTTGGGAATATCCGGGACACAAAAGGTTCAAGGGTACCATGGAGATCAAAGATGTTGTTACAGAGCATGCTCTTGAATTGCTCCCTGCAAAAACACTCTCCCGGTTCAGAGCTGTTAGCAAAGAGTGGAATGAGCTGATTACCAGCCCTTTCTTCATGCACAAGCAAGCTTACCGCTTCCGGGACATCTCTGGCCTCTTTTGTCAACTCCCTGGCGACAGGCCTTTCTTTGTATCTCTTAATCGTGATGCTTATGGCGTTCCCAGTCCTTCCCTCAGCTTCTTGCCTGAACCGGTTACTGTCAGAACCAGCTGCAATGGTCTGCTTTGCTGCCAAAGCTGTGATGGAGAGAACACCTACTACATTTGCAATCCTGCTAACAGGGAGTGGAGTGCGCTGCCCAAGTCGAACTTCTATCATGGCCCTGAACCTGCCCTAGCTCTAGCCTTTGAGCCTTCTGTGCTTAATTTTGCAGAACATTTCCAACTTGTTTGCGCCTTCTCTCTAACTGATCATCCGGTTATCTGTTTCGAGATCTACTCTTCAAGGTCATCCTCATGGAGACTTGCTGACACAGAATGCTGTGAGTTGGATGCTCTGAAGTTGAATGGTGACGGGCTCTTTCTGAAGGGTGTTGCCTTTTGGGAAACTTCTGCTGGAGCTGTTTTGGCTTTTGATTTGAATGACGAGCATTATGGTATTCTGTCGCTTCCTCCCAACAGTGGACCACACGGTGTATTGACAGAGATGAATGGTGAGCTGTGCTACCTTCTGCCTCGCAAAGATGAGAATGAATACACCCTGGACATCTATGGTGACATGGACATGGGTCTGAAACATAGTATTGCTCTTGGTCGTGAGTTTTTCAACAATTTTAACAAGGAGTTGAGGGCGTTGGCATGCGTGAACAATGACGTGGTGATATTTGATTTTGGAAAGGGACTCTATGCTTATAATCGGAAGACAGGGAAGGCTGAAATTCTAAGAAGTGGCGACAGGACTGATGTTGGATATGTAAGGTATCTTCCTTATGTCAACAACCTCGTGCACATTCGCCCTTCGTACATGAGCAGTATACTTGCTGTGGATCCTTCTGCTAAGCTAGCTAGTGAAGTTTCCGGGCACCACAACATACATCTCTTTGGGAAAGTAGTCCTTGGCCGGAGGTTGATCAAGAGACGAATAATGTCTTCTGATAGTGAGCCGTCCCCGGACTCTTCATCTTCTTCACCACCTGCGCCGGACTCGTCCAAGTCATCTCCATCTGGTCCATCTCCAAAGGAATCCCCAGAGGACTCATCTTCGGCGCCACCACCATCCTCGACACCGGCATCATCACCACCACCGTCCTCGCCGCCTCCATCATCATCTCCGCCTCCAAAGGACTCGTCTTCATCGTCATCGCCGCCTCCCAAGGACTCGTCTTCATCATCATCGCCACCTCCCAAGGACTCGTCTTCATCATCATCGCCACCTCCGCCCAAGCAGGGCTCCCAGTCTCCACCTGCACCAAAAGAGGCGACCCCATCTCCACCTCATGCTAAGGAATCGCCGGGGAAGGCAACACCGGTACAACAGACACCAGCGGCAGATGCTGAAAATGAGACTTTGAGTGCGCCTCCTCATCCAGGGCGTTCTCGGACTTCTCCCTCAGGTGCACTCACGCCACCACGTGCTAGTAGTTCCTCATCAAAAAGTAGTTCTGATGATGACGACACATCATCATCTTCAAATAAAGGCAGGGCGGCGGGAGTTGCAATTGGGGCAGCTGTAATTATAATTGTCTTGCTCGTCGTTTGTGTGCTTAAGACATATACGGAAAACGTTGAAATGGTTGAACTAAAAGAAAATTATATAATTATCGTAGAACATGCAATAGACTTATTGACTTGTTCATACAATAAAGGAAAACAACTTTATATGCGCGCAGCTGGTGGTGGCTATTACAACACACAACAACAAAGTTGGCACGATATGAATAATCCACAAGGAGACCATGTGATGAGGCTAAACAACCAACCACCTGGTGGTGGTGCTTGGGCTTCAACACCTCCTCAAATGCCGATGAGCGGTGAAGTGAGCACCAATTACTCAGCACCCCCATTGCCACCTCCCTCACCATCAATGGCACTTGGTTTCAACAAGAGCACATTCACATATGATGAGCTAGCAGCCGCTACTAATGGGTTTGATCAGGCTAATTTGTTGGGTCAGGGCGGGTTCGGGTATGTGCACAAAGGTGTTTTGCCTAATGGAACAATAATTGCAGTGAAAAGTCTCAAGTCTGGCAGTGGGCAAGGAGAAAGAGAATTCGCAGCGGAGGTGGAGATCATTAGTCGCGTTCATCATCGACATCTTGTGTCACTGGTTGGATATTGTATTGTTGGTGAGCAGAGAATGCTGGTCTATGAATTTGTTTCCAACAAAACCATGGAATATCACTTGCATGGTGAGTATGAATGCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

959

Amino Acids

104.37

Weight (kDa)

5.85

Isoelectric Point (pI)

64.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 236 - 405 8.7e-07 F-box protein At3g26010-like, beta-propeller
FBA_3 PF08268 236 - 407 6.6e-06 F-box associated beta propeller domain
FBA_1 PF07734 239 - 394 1.1e-10 F-box associated beta propeller domain
Pkinase PF00069 868 - 952 7.4e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 870 - 952 1.2e-12 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1362, 2186
AarI CACCTGC 2 cut(s) 1651, 1921
Acc36I ACCTGC 3 cut(s) 847, 1651, 1921
Acc65I GGTACC 1 cut(s) 443
AccB1I GGYRCC 3 cut(s) 443, 1530, 1714
AccB7I CCANNNNNTGG 1 cut(s) 2435
AccBSI CCGCTC 1 cut(s) 2478
AccI GTMKAC 1 cut(s) 1483
AccII CGCG 2 cut(s) 2334, 2748
AccIII TCCGGA 1 cut(s) 322
AclI AACGTT 1 cut(s) 2232
AclWI GGATC 3 cut(s) 333, 1490, 1503
AcoI YGGCCR 2 cut(s) 129, 1567
AcsI RAATTY 4 cut(s) 408, 1386, 2717, 2819
AcuI CTGAAG 2 cut(s) 1028, 1055
AcvI CACGTG 2 cut(s) 56, 2081
AcyI GRCGYC 1 cut(s) 1715
AdeI CACNNNGTG 3 cut(s) 1142, 2081, 2435
AfaI GTAC 4 cut(s) 402, 445, 1472, 1980
AfiI CCNNNNNNNGG 7 cut(s) 589, 1130, 1895, 2036, 2435, 2438, 2477
AflII CTTAAG 1 cut(s) 2213
AflIII ACRYGT 2 cut(s) 53, 55
AgeI ACCGGT 2 cut(s) 700, 1975
AjiI CACGTC 2 cut(s) 25, 1324
AjnI CCWGG 5 cut(s) 99, 619, 1209, 2035, 2431
AjuI GAANNNNNNNTTGG 2 cut(s) 803, 835
AleI CACNNNNGTG 2 cut(s) 54, 2646
Alw21I GWGCWC 5 cut(s) 1458, 2068, 2492, 2558, 2643
Alw26I GTCTC 6 cut(s) 964, 1579, 1911, 2006, 2394, 2690
Alw44I GTGCAC 3 cut(s) 1454, 2064, 2639
AlwI GGATC 3 cut(s) 333, 1490, 1503
AlwNI CAGNNNCTG 1 cut(s) 2003
Aor13HI TCCGGA 1 cut(s) 322
AoxI GGCC 6 cut(s) 102, 129, 601, 629, 829, 1567
ApaLI GTGCAC 3 cut(s) 1454, 2064, 2639
ApeKI GCWGC 8 cut(s) 162, 720, 738, 805, 2174, 2336, 2579, 2723
ApoI RAATTY 4 cut(s) 408, 1386, 2717, 2819
ArsI GACNNNNNNTTYG 2 cut(s) 1781, 1813
AseI ATTAAT 1 cut(s) 39
AsiGI ACCGGT 2 cut(s) 700, 1975
Asp718I GGTACC 1 cut(s) 443
AspLEI GCGC 7 cut(s) 805, 905, 1648, 1717, 2026, 2334, 2336
AspS9I GGNCC 4 cut(s) 103, 830, 1133, 1676
AsuC2I CCSGG 6 cut(s) 423, 511, 590, 1528, 1619, 1962
AsuNHI GCTAGC 2 cut(s) 1510, 2575
AvaII GGWCC 2 cut(s) 1133, 1676
AxyI CCTNAGG 1 cut(s) 2059
BaeGI GKGCMC 4 cut(s) 1458, 1533, 2068, 2643
BamHI GGATCC 1 cut(s) 1495
BanI GGYRCC 3 cut(s) 443, 1530, 1714
BanII GRGCYC 2 cut(s) 1029, 1901
BarI GAAGNNNNNNTAC 2 cut(s) 1416, 1448
BauI CACGAG 1 cut(s) 1451
BbrPI CACGTG 2 cut(s) 56, 2081
BbsI GAAGAC 6 cut(s) 116, 1376, 1590, 1791, 1824, 1857
Bbv12I GWGCWC 5 cut(s) 1458, 2068, 2492, 2558, 2643
BbvCI CCTCAGC 1 cut(s) 683
BbvI GCAGC 8 cut(s) 174, 707, 725, 792, 2186, 2348, 2591, 2735
BccI CCATC 9 cut(s) 242, 341, 746, 1678, 1687, 1732, 1777, 1942, 2536
BceAI ACGGC 2 cut(s) 144, 1597
BciT130I CCWGG 5 cut(s) 101, 621, 1211, 2037, 2433
BciVI GTATCC 1 cut(s) 350
BclI TGATCA 3 cut(s) 919, 1578, 2599
BcnI CCSGG 6 cut(s) 423, 511, 590, 1528, 1619, 1962
BcoDI GTCTC 6 cut(s) 964, 1579, 1911, 2006, 2394, 2690
BfaI CTAG 6 cut(s) 845, 851, 1511, 1515, 2085, 2576
BfoI RGCGCY 1 cut(s) 1718
BfrI CTTAAG 1 cut(s) 2213
BfuAI ACCTGC 3 cut(s) 847, 1651, 1921
BfuI GTATCC 1 cut(s) 350
BglII AGATCT 1 cut(s) 942
BlpI GCTNAGC 1 cut(s) 1506
Bme18I GGWCC 2 cut(s) 1133, 1676
BmgBI CACGTC 2 cut(s) 25, 1324
BmgT120I GGNCC 4 cut(s) 103, 830, 1133, 1676
BmiI GGNNCC 5 cut(s) 445, 1497, 1532, 1716, 1900
BmrI ACTGGG 2 cut(s) 666, 1897
BmsI GCATC 5 cut(s) 352, 646, 991, 1748, 1990
BmtI GCTAGC 2 cut(s) 1514, 2579
BmuI ACTGGG 2 cut(s) 666, 1897
BoxI GACNNNNGTC 1 cut(s) 1236
BpiI GAAGAC 6 cut(s) 116, 1376, 1590, 1791, 1824, 1857
BplI GAGNNNNNCTC 4 cut(s) 932, 964, 2011, 2043
BpmI CTGGAG 1 cut(s) 1086
Bpu10I CCTNAGC 2 cut(s) 683, 1950
Bpu1102I GCTNAGC 1 cut(s) 1506
BpuEI CTTGAG 1 cut(s) 2672
BpuMI CCSGG 6 cut(s) 423, 511, 590, 1528, 1619, 1962
Bsa29I ATCGAT 1 cut(s) 169
BsaAI YACGTR 2 cut(s) 56, 2081
BsaHI GRCGYC 1 cut(s) 1715
BsaI GGTCTC 1 cut(s) 2394
BsaWI WCCGGW 4 cut(s) 322, 700, 925, 1975
BsaXI ACNNNNNCTCC 4 cut(s) 1921, 1951, 2391, 2421
Bsc4I CCNNNNNNNGG 7 cut(s) 589, 1130, 1895, 2036, 2435, 2438, 2477
Bse118I RCCGGY 3 cut(s) 700, 1735, 1975
Bse1I ACTGG 3 cut(s) 672, 1903, 2778
Bse21I CCTNAGG 1 cut(s) 2059
Bse3DI GCAATG 2 cut(s) 730, 2510
BseAI TCCGGA 1 cut(s) 322
BseBI CCWGG 5 cut(s) 101, 621, 1211, 2037, 2433
BseCI ATCGAT 1 cut(s) 169
BseGI GGATG 6 cut(s) 352, 922, 959, 1006, 1724, 2032
BseLI CCNNNNNNNGG 7 cut(s) 589, 1130, 1895, 2036, 2435, 2438, 2477
BseMI GCAATG 2 cut(s) 730, 2510
BseMII CTCAG 6 cut(s) 158, 204, 255, 697, 2073, 2514
BseNI ACTGG 3 cut(s) 672, 1903, 2778
BsePI GCGCGC 1 cut(s) 2332
BseRI GAGGAG 3 cut(s) 239, 2019, 2451
BseSI GKGCMC 4 cut(s) 1458, 1533, 2068, 2643
BseXI GCAGC 8 cut(s) 174, 707, 725, 792, 2186, 2348, 2591, 2735
BsgI GTGCAG 1 cut(s) 1899
Bsh1236I CGCG 2 cut(s) 2334, 2748
Bsh1285I CGRYCG 1 cut(s) 169
BshFI GGCC 6 cut(s) 104, 131, 603, 631, 831, 1569
BshNI GGYRCC 3 cut(s) 443, 1530, 1714
BshTI ACCGGT 2 cut(s) 700, 1975
BshVI ATCGAT 1 cut(s) 169
BsiEI CGRYCG 1 cut(s) 169
BsiHKAI GWGCWC 5 cut(s) 1458, 2068, 2492, 2558, 2643
BslFI GGGAC 5 cut(s) 82, 438, 605, 1362, 1600
BslI CCNNNNNNNGG 7 cut(s) 589, 1130, 1895, 2036, 2435, 2438, 2477
BsmAI GTCTC 6 cut(s) 964, 1579, 1911, 2006, 2394, 2690
BsmBI CGTCTC 1 cut(s) 1579
BsmFI GGGAC 5 cut(s) 82, 438, 605, 1362, 1600
BsmI GAATGC 3 cut(s) 992, 2811, 2873
BsnI GGCC 6 cut(s) 104, 131, 603, 631, 831, 1569
Bso31I GGTCTC 1 cut(s) 2394
Bsp1286I GDGCHC 8 cut(s) 1029, 1458, 1533, 1901, 2068, 2492, 2558, 2643
Bsp13I TCCGGA 1 cut(s) 322
Bsp1720I GCTNAGC 1 cut(s) 1506
Bsp19I CCATGG 2 cut(s) 447, 2838
BspANI GGCC 6 cut(s) 104, 131, 603, 631, 831, 1569
BspCNI CTCAG 6 cut(s) 157, 205, 256, 696, 2072, 2513
BspDI ATCGAT 1 cut(s) 169
BspEI TCCGGA 1 cut(s) 322
BspFNI CGCG 2 cut(s) 2334, 2748
BspLI GGNNCC 5 cut(s) 445, 1497, 1532, 1716, 1900
BspMI ACCTGC 3 cut(s) 847, 1651, 1921
BspOI GCTAGC 2 cut(s) 1514, 2579
BspPI GGATC 3 cut(s) 333, 1490, 1503
BspT107I GGYRCC 3 cut(s) 443, 1530, 1714
BspTI CTTAAG 1 cut(s) 2213
BspTNI GGTCTC 1 cut(s) 2394
BsrBI CCGCTC 1 cut(s) 2478
BsrDI GCAATG 2 cut(s) 730, 2510
BsrFI RCCGGY 3 cut(s) 700, 1735, 1975
BsrI ACTGG 3 cut(s) 672, 1903, 2778
BssAI RCCGGY 3 cut(s) 700, 1735, 1975
BssHII GCGCGC 1 cut(s) 2332
BssNAI GTATAC 1 cut(s) 1484
BssNI GRCGYC 1 cut(s) 1715
BssSI CACGAG 1 cut(s) 1451
BssT1I CCWWGG 5 cut(s) 447, 1564, 1821, 1854, 2838
Bst1107I GTATAC 1 cut(s) 1484
Bst2BI CACGAG 1 cut(s) 1451
Bst2UI CCWGG 5 cut(s) 101, 621, 1211, 2037, 2433
Bst4CI ACNGT 5 cut(s) 290, 709, 1130, 1142, 1755
Bst6I CTCTTC 2 cut(s) 955, 1630
BstACI GRCGYC 1 cut(s) 1715
BstAFI CTTAAG 1 cut(s) 2213
BstAPI GCANNNNNTGC 1 cut(s) 2806
BstBAI YACGTR 2 cut(s) 56, 2081
BstC8I GCNNGC 6 cut(s) 477, 576, 1309, 1512, 2334, 2577
BstDSI CCRYGG 2 cut(s) 447, 2838
BstENI CCTNNNNNAGG 1 cut(s) 2034
BstF5I GGATG 6 cut(s) 352, 922, 959, 1006, 1724, 2032
BstFNI CGCG 2 cut(s) 2334, 2748
BstH2I RGCGCY 1 cut(s) 1718
BstHHI GCGC 7 cut(s) 805, 905, 1648, 1717, 2026, 2334, 2336
BstMAI GTCTC 6 cut(s) 964, 1579, 1911, 2006, 2394, 2690
BstMCI CGRYCG 1 cut(s) 169
BstMWI GCNNNNNNNGC 9 cut(s) 744, 868, 1076, 1511, 1885, 2000, 2162, 2171, 2806
BstNI CCWGG 5 cut(s) 101, 621, 1211, 2037, 2433
BstNSI RCATGY 3 cut(s) 479, 1311, 2282
BstPAI GACNNNNGTC 1 cut(s) 1236
BstSLI GKGCMC 4 cut(s) 1458, 1533, 2068, 2643
BstUI CGCG 2 cut(s) 2334, 2748
BstV1I GCAGC 8 cut(s) 174, 707, 725, 792, 2186, 2348, 2591, 2735
BstV2I GAAGAC 6 cut(s) 116, 1376, 1590, 1791, 1824, 1857
BstX2I RGATCY 2 cut(s) 942, 1495
BstXI CCANNNNNNTGG 1 cut(s) 2432
BstYI RGATCY 2 cut(s) 942, 1495
BstZ17I GTATAC 1 cut(s) 1484
Bsu15I ATCGAT 1 cut(s) 169
Bsu36I CCTNAGG 1 cut(s) 2059
BsuI GTATCC 1 cut(s) 350
BsuRI GGCC 6 cut(s) 104, 131, 603, 631, 831, 1569
BsuTUI ATCGAT 1 cut(s) 169
BtgI CCRYGG 2 cut(s) 447, 2838
BtgZI GCGATG 3 cut(s) 1794, 1827, 1860
BtrI CACGTC 2 cut(s) 25, 1324
BtsCI GGATG 6 cut(s) 352, 922, 959, 1006, 1724, 2032
BtsI GCAGTG 2 cut(s) 2682, 2704
BtsIMutI CAGTG 4 cut(s) 1135, 2682, 2704, 2771
BveI ACCTGC 3 cut(s) 847, 1651, 1921
Cac8I GCNNGC 6 cut(s) 477, 576, 1309, 1512, 2334, 2577
CaiI CAGNNNCTG 1 cut(s) 2003
CfoI GCGC 7 cut(s) 805, 905, 1648, 1717, 2026, 2334, 2336
Cfr10I RCCGGY 3 cut(s) 700, 1735, 1975
Cfr13I GGNCC 4 cut(s) 103, 830, 1133, 1676
ClaI ATCGAT 1 cut(s) 169
CsiI ACCWGGT 1 cut(s) 2431
Csp6I GTAC 4 cut(s) 401, 444, 1471, 1979
CspAI ACCGGT 2 cut(s) 700, 1975
CviQI GTAC 4 cut(s) 401, 444, 1471, 1979
DinI GGCGCC 1 cut(s) 1716
DraIII CACNNNGTG 3 cut(s) 1142, 2081, 2435
EaeI YGGCCR 2 cut(s) 129, 1567
Eam1104I CTCTTC 2 cut(s) 955, 1630
EarI CTCTTC 2 cut(s) 955, 1630
EciI GGCGGA 2 cut(s) 1770, 1875
Eco130I CCWWGG 5 cut(s) 447, 1564, 1821, 1854, 2838
Eco147I AGGCCT 1 cut(s) 631
Eco24I GRGCYC 2 cut(s) 1029, 1901
Eco31I GGTCTC 1 cut(s) 2394
Eco32I GATATC 1 cut(s) 377
Eco47I GGWCC 2 cut(s) 1133, 1676
Eco57I CTGAAG 2 cut(s) 1028, 1055
Eco72I CACGTG 2 cut(s) 56, 2081
Eco81I CCTNAGG 1 cut(s) 2059
EcoNI CCTNNNNNAGG 1 cut(s) 2034
EcoRI GAATTC 1 cut(s) 2717
EcoRII CCWGG 5 cut(s) 99, 619, 1209, 2035, 2431
EcoRV GATATC 1 cut(s) 377
EcoT14I CCWWGG 5 cut(s) 447, 1564, 1821, 1854, 2838
EcoT38I GRGCYC 2 cut(s) 1029, 1901
EgeI GGCGCC 1 cut(s) 1716
EheI GGCGCC 1 cut(s) 1716
ErhI CCWWGG 5 cut(s) 447, 1564, 1821, 1854, 2838
Esp3I CGTCTC 1 cut(s) 1579
FalI AAGNNNNNCTT 6 cut(s) 261, 293, 803, 835, 1548, 1580
FaqI GGGAC 5 cut(s) 82, 438, 605, 1362, 1600
FauI CCCGC 2 cut(s) 2149, 2618
FauNDI CATATG 1 cut(s) 2566
FbaI TGATCA 3 cut(s) 919, 1578, 2599
FblI GTMKAC 1 cut(s) 1483
FokI GGATG 6 cut(s) 359, 909, 946, 1013, 1711, 2019
FriOI GRGCYC 2 cut(s) 1029, 1901
FspBI CTAG 6 cut(s) 845, 851, 1511, 1515, 2085, 2576
GlaI GCGC 7 cut(s) 804, 904, 1647, 1716, 2025, 2333, 2335
GsuI CTGGAG 1 cut(s) 1086
HaeII RGCGCY 1 cut(s) 1718
HaeIII GGCC 6 cut(s) 104, 131, 603, 631, 831, 1569
HhaI GCGC 7 cut(s) 805, 905, 1648, 1717, 2026, 2334, 2336
Hin1I GRCGYC 1 cut(s) 1715
Hin6I GCGC 7 cut(s) 803, 903, 1646, 1715, 2024, 2332, 2334
HinP1I GCGC 7 cut(s) 803, 903, 1646, 1715, 2024, 2332, 2334
HincII GTYRAC 2 cut(s) 614, 1444
HindII GTYRAC 2 cut(s) 614, 1444
HindIII AAGCTT 1 cut(s) 576
Hpy188III TCNNGA 6 cut(s) 323, 482, 653, 940, 1265, 1582
Hpy99I CGWCG 2 cut(s) 200, 2204
HpyAV CCTTC 9 cut(s) 687, 873, 916, 1030, 1187, 1372, 1476, 1509, 1960
HpyCH4III ACNGT 5 cut(s) 290, 709, 1130, 1142, 1755
HpyCH4IV ACGT 5 cut(s) 24, 55, 1323, 2080, 2232
HpyF10VI GCNNNNNNNGC 9 cut(s) 744, 868, 1076, 1511, 1885, 2000, 2162, 2171, 2806
HpySE526I ACGT 5 cut(s) 24, 55, 1323, 2080, 2232
Hsp92I GRCGYC 1 cut(s) 1715
HspAI GCGC 7 cut(s) 803, 903, 1646, 1715, 2024, 2332, 2334
KasI GGCGCC 1 cut(s) 1714
Kpn2I TCCGGA 1 cut(s) 322
KpnI GGTACC 1 cut(s) 447
Ksp22I TGATCA 3 cut(s) 919, 1578, 2599
LmnI GCTCC 4 cut(s) 400, 495, 1067, 1904
Lsp1109I GCAGC 8 cut(s) 174, 707, 725, 792, 2186, 2348, 2591, 2735
LweI GCATC 5 cut(s) 352, 646, 991, 1748, 1990
MabI ACCWGGT 1 cut(s) 2431
MaeI CTAG 6 cut(s) 845, 851, 1511, 1515, 2085, 2576
MaeII ACGT 5 cut(s) 24, 55, 1323, 2080, 2232
MaeIII GTNAC 5 cut(s) 466, 703, 1019, 1223, 2769
MbiI CCGCTC 1 cut(s) 2478
MfeI CAATTG 1 cut(s) 2166
MflI RGATCY 2 cut(s) 942, 1495
MhlI GDGCHC 8 cut(s) 1029, 1458, 1533, 1901, 2068, 2492, 2558, 2643
Mly113I GGCGCC 1 cut(s) 1715
MlyI GAGTC 7 cut(s) 1344, 1616, 1646, 1697, 1787, 1820, 1853
MmeI TCCRAC 5 cut(s) 916, 978, 1396, 2758, 2853
MroI TCCGGA 1 cut(s) 322
MseI TTAA 6 cut(s) 39, 135, 648, 873, 1284, 2214
MslI CAYNNNNRTG 5 cut(s) 54, 964, 1232, 2646, 2853
MspA1I CMGCKG 5 cut(s) 720, 1994, 2177, 2339, 2726
MspCI CTTAAG 1 cut(s) 2213
MunI CAATTG 1 cut(s) 2166
Mva1269I GAATGC 3 cut(s) 992, 2811, 2873
MvaI CCWGG 5 cut(s) 101, 621, 1211, 2037, 2433
MvnI CGCG 2 cut(s) 2334, 2748
MwoI GCNNNNNNNGC 9 cut(s) 744, 868, 1076, 1511, 1885, 2000, 2162, 2171, 2806
NarI GGCGCC 1 cut(s) 1715
NciI CCSGG 6 cut(s) 423, 511, 590, 1528, 1619, 1962
NcoI CCATGG 2 cut(s) 447, 2838
NdeI CATATG 1 cut(s) 2566
NheI GCTAGC 2 cut(s) 1510, 2575
NlaIV GGNNCC 5 cut(s) 445, 1497, 1532, 1716, 1900
NmuCI GTSAC 3 cut(s) 1019, 1223, 2769
NspI RCATGY 3 cut(s) 479, 1311, 2282
OliI CACNNNNGTG 2 cut(s) 54, 2646
PaeI GCATGC 2 cut(s) 479, 1311
PaqCI CACCTGC 2 cut(s) 1651, 1921
PauI GCGCGC 1 cut(s) 2332
PceI AGGCCT 1 cut(s) 631
PcsI WCGNNNNNNNCGW 1 cut(s) 1802
PctI GAATGC 3 cut(s) 992, 2811, 2873
PfeI GAWTC 3 cut(s) 4, 1691, 1955
PflMI CCANNNNNTGG 1 cut(s) 2435
PfoI TCCNGGA 2 cut(s) 421, 588
PinAI ACCGGT 2 cut(s) 700, 1975
Ple19I CGATCG 1 cut(s) 169
PleI GAGTC 7 cut(s) 1344, 1616, 1646, 1697, 1787, 1820, 1853
PluTI GGCGCC 1 cut(s) 1718
PmaCI CACGTG 2 cut(s) 56, 2081
PmlI CACGTG 2 cut(s) 56, 2081
PpsI GAGTC 7 cut(s) 1344, 1616, 1646, 1697, 1787, 1820, 1853
Ppu21I YACGTR 2 cut(s) 56, 2081
PshAI GACNNNNGTC 1 cut(s) 1236
PshBI ATTAAT 1 cut(s) 39
PsiI TTATAA 2 cut(s) 1362, 2186
Psp1406I AACGTT 1 cut(s) 2232
Psp6I CCWGG 5 cut(s) 99, 619, 1209, 2035, 2431
PspCI CACGTG 2 cut(s) 56, 2081
PspGI CCWGG 5 cut(s) 99, 619, 1209, 2035, 2431
PspN4I GGNNCC 5 cut(s) 445, 1497, 1532, 1716, 1900
PspPI GGNCC 4 cut(s) 103, 830, 1133, 1676
PsrI GAACNNNNNNTAC 2 cut(s) 752, 784
PstNI CAGNNNCTG 1 cut(s) 2003
PsuI RGATCY 2 cut(s) 942, 1495
PteI GCGCGC 1 cut(s) 2332
PvuI CGATCG 1 cut(s) 169
PvuII CAGCTG 3 cut(s) 720, 2177, 2339
RsaI GTAC 4 cut(s) 402, 445, 1472, 1980
RsaNI GTAC 4 cut(s) 401, 444, 1471, 1979
RseI CAYNNNNRTG 5 cut(s) 54, 964, 1232, 2646, 2853
SaqAI TTAA 6 cut(s) 39, 135, 648, 873, 1284, 2214
Sau96I GGNCC 4 cut(s) 103, 830, 1133, 1676
SchI GAGTC 7 cut(s) 1344, 1616, 1646, 1697, 1787, 1820, 1853
SduI GDGCHC 8 cut(s) 1029, 1458, 1533, 1901, 2068, 2492, 2558, 2643
SexAI ACCWGGT 1 cut(s) 2431
SfaNI GCATC 5 cut(s) 352, 646, 991, 1748, 1990
SfoI GGCGCC 1 cut(s) 1716
SinI GGWCC 2 cut(s) 1133, 1676
SmiMI CAYNNNNRTG 5 cut(s) 54, 964, 1232, 2646, 2853
SmlI CTYRAG 2 cut(s) 2213, 2687
SmoI CTYRAG 2 cut(s) 2213, 2687
SphI GCATGC 2 cut(s) 479, 1311
SseBI AGGCCT 1 cut(s) 631
SspDI GGCGCC 1 cut(s) 1714
SspMI CTAG 6 cut(s) 845, 851, 1511, 1515, 2085, 2576
StuI AGGCCT 1 cut(s) 631
StyI CCWWGG 5 cut(s) 447, 1564, 1821, 1854, 2838
TaaI ACNGT 5 cut(s) 290, 709, 1130, 1142, 1755
TaiI ACGT 5 cut(s) 27, 58, 1326, 2083, 2235
TaqI TCGA 6 cut(s) 169, 282, 815, 939, 1730, 2758
TatI WGTACW 1 cut(s) 400
TauI GCSGC 6 cut(s) 192, 1765, 1816, 1997, 2156, 2585
TfiI GAWTC 3 cut(s) 4, 1691, 1955
Tru1I TTAA 6 cut(s) 39, 135, 648, 873, 1284, 2214
Tru9I TTAA 6 cut(s) 39, 135, 648, 873, 1284, 2214
TscAI CASTG 4 cut(s) 1135, 2682, 2704, 2778
TseFI GTSAC 3 cut(s) 1019, 1223, 2769
TseI GCWGC 8 cut(s) 162, 720, 738, 805, 2174, 2336, 2579, 2723
Tsp45I GTSAC 3 cut(s) 1019, 1223, 2769
TspGWI ACGGA 3 cut(s) 139, 387, 2240
TspRI CASTG 4 cut(s) 1135, 2682, 2704, 2778
Van91I CCANNNNNTGG 1 cut(s) 2435
Vha464I CTTAAG 1 cut(s) 2213
VneI GTGCAC 3 cut(s) 1454, 2064, 2639
VpaK11BI GGWCC 2 cut(s) 1133, 1676
VspI ATTAAT 1 cut(s) 39
XagI CCTNNNNNAGG 1 cut(s) 2034
XapI RAATTY 4 cut(s) 408, 1386, 2717, 2819
XceI RCATGY 3 cut(s) 479, 1311, 2282
XcmI CCANNNNNNNNNTGG 3 cut(s) 749, 2432, 2836
XmiI GTMKAC 1 cut(s) 1483
XspI CTAG 6 cut(s) 845, 851, 1511, 1515, 2085, 2576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.