integrin-mediated signaling pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12320 |
| fragaria_vesca | FvH4_1g25870 |
| malus_domestica | MD03G1167000.v1.1 MD11G1186200.v1.1 |
| prunus_persica | Prupe.4G267400_v2.0.a1 Prupe.4G267400_v2.0.a1 |
| pyrus_communis | pycom03g12240 pycom12g08670 |
| rosa_chinensis | RchiOBHm_Chr3g0485011 |
| rosa_laevigata | RLG00000000958 RLG00000004598 RLG00000008951 RLG00000023176 RLG00000023289 RLG00000031269 |
| rosa_multiflora | Rmu_sc0006040.1_g000021 Rmu_sc0007628.1_g000001 Rmu_sc0008046.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00397260 Rroxscaffold_6G00413790 |
| rosa_rugosa | Rorug03G0215100 |
| rosa_samantha | Rh2BG228600 Rh3AG265500 Rh3BG301100 Rh3CG299400 Rh3DG295200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 164, 167 |
| AflIII | ACRYGT | 1 cut(s) | 37 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 168, 200 |
| AluBI | AGCT | 2 cut(s) | 96, 184 |
| AluI | AGCT | 2 cut(s) | 96, 184 |
| ApeKI | GCWGC | 1 cut(s) | 170 |
| BbvI | GCAGC | 1 cut(s) | 157 |
| BccI | CCATC | 1 cut(s) | 133 |
| BceAI | ACGGC | 1 cut(s) | 140 |
| BfaI | CTAG | 1 cut(s) | 205 |
| BisI | GCNGC | 3 cut(s) | 165, 168, 171 |
| BlsI | GCNGC | 3 cut(s) | 166, 169, 172 |
| BmrI | ACTGGG | 1 cut(s) | 28 |
| BmsI | GCATC | 1 cut(s) | 142 |
| BmuI | ACTGGG | 1 cut(s) | 28 |
| BpmI | CTGGAG | 1 cut(s) | 93 |
| Bse1I | ACTGG | 2 cut(s) | 23, 110 |
| BseGI | GGATG | 3 cut(s) | 144, 148, 157 |
| BseNI | ACTGG | 2 cut(s) | 23, 110 |
| BseXI | GCAGC | 1 cut(s) | 157 |
| Bsp143I | GATC | 1 cut(s) | 60 |
| BspACI | CCGC | 2 cut(s) | 164, 167 |
| BsrI | ACTGG | 2 cut(s) | 23, 110 |
| BssMI | GATC | 1 cut(s) | 60 |
| BstC8I | GCNNGC | 1 cut(s) | 25 |
| BstDEI | CTNAG | 2 cut(s) | 64, 80 |
| BstF5I | GGATG | 3 cut(s) | 144, 148, 157 |
| BstKTI | GATC | 1 cut(s) | 63 |
| BstMBI | GATC | 1 cut(s) | 60 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 161, 170 |
| BstNSI | RCATGY | 1 cut(s) | 41 |
| BstV1I | GCAGC | 1 cut(s) | 157 |
| BtsCI | GGATG | 3 cut(s) | 144, 148, 157 |
| BtsI | GCAGTG | 1 cut(s) | 129 |
| BtsIMutI | CAGTG | 2 cut(s) | 16, 129 |
| Cac8I | GCNNGC | 1 cut(s) | 25 |
| CviAII | CATG | 1 cut(s) | 38 |
| CviJI | RGCY | 4 cut(s) | 23, 96, 170, 184 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 96, 170, 184 |
| DdeI | CTNAG | 2 cut(s) | 64, 80 |
| DpnI | GATC | 1 cut(s) | 62 |
| DpnII | GATC | 1 cut(s) | 60 |
| FaeI | CATG | 1 cut(s) | 41 |
| FaiI | YATR | 1 cut(s) | 39 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 168, 200 |
| FatI | CATG | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 3 cut(s) | 165, 168, 171 |
| FokI | GGATG | 3 cut(s) | 151, 155, 164 |
| Fsp4HI | GCNGC | 3 cut(s) | 165, 168, 171 |
| FspBI | CTAG | 1 cut(s) | 205 |
| GluI | GCNGC | 3 cut(s) | 165, 168, 171 |
| GsuI | CTGGAG | 1 cut(s) | 93 |
| Hin1II | CATG | 1 cut(s) | 41 |
| HinfI | GANTC | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 188 |
| HpyAV | CCTTC | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 161, 170 |
| HpyF3I | CTNAG | 2 cut(s) | 64, 80 |
| Hsp92II | CATG | 1 cut(s) | 41 |
| Kzo9I | GATC | 1 cut(s) | 60 |
| LmnI | GCTCC | 1 cut(s) | 71 |
| LpnPI | CCDG | 6 cut(s) | 4, 41, 54, 115, 123, 134 |
| Lsp1109I | GCAGC | 1 cut(s) | 157 |
| LweI | GCATC | 1 cut(s) | 142 |
| MaeI | CTAG | 1 cut(s) | 205 |
| MalI | GATC | 1 cut(s) | 62 |
| MboI | GATC | 1 cut(s) | 60 |
| MluCI | AATT | 1 cut(s) | 56 |
| MlyI | GAGTC | 1 cut(s) | 100 |
| MnlI | CCTC | 2 cut(s) | 21, 37 |
| MseI | TTAA | 3 cut(s) | 51, 89, 159 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 161, 170 |
| NdeII | GATC | 1 cut(s) | 60 |
| NlaIII | CATG | 1 cut(s) | 41 |
| NspI | RCATGY | 1 cut(s) | 41 |
| PciI | ACATGT | 1 cut(s) | 37 |
| PkrI | GCNGC | 3 cut(s) | 166, 169, 172 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PscI | ACATGT | 1 cut(s) | 37 |
| SaqAI | TTAA | 3 cut(s) | 51, 89, 159 |
| SatI | GCNGC | 3 cut(s) | 165, 168, 171 |
| Sau3AI | GATC | 1 cut(s) | 60 |
| SchI | GAGTC | 1 cut(s) | 100 |
| SetI | ASST | 4 cut(s) | 13, 48, 98, 186 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| Sse9I | AATT | 1 cut(s) | 56 |
| SsiI | CCGC | 2 cut(s) | 164, 167 |
| SspMI | CTAG | 1 cut(s) | 205 |
| TasI | AATT | 1 cut(s) | 56 |
| TauI | GCSGC | 2 cut(s) | 167, 170 |
| Tru1I | TTAA | 3 cut(s) | 51, 89, 159 |
| Tru9I | TTAA | 3 cut(s) | 51, 89, 159 |
| TscAI | CASTG | 2 cut(s) | 23, 129 |
| TseI | GCWGC | 1 cut(s) | 170 |
| TspDTI | ATGAA | 2 cut(s) | 17, 132 |
| TspRI | CASTG | 2 cut(s) | 23, 129 |
| XceI | RCATGY | 1 cut(s) | 41 |
| XspI | CTAG | 1 cut(s) | 205 |