integrin-mediated signaling pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12320 |
| fragaria_vesca | FvH4_1g25870 |
| malus_domestica | MD03G1167000.v1.1 MD11G1186200.v1.1 |
| prunus_persica | Prupe.4G267400_v2.0.a1 Prupe.4G267400_v2.0.a1 |
| pyrus_communis | pycom03g12240 pycom12g08670 |
| rosa_chinensis | RchiOBHm_Chr3g0485011 |
| rosa_laevigata | RLG00000000958 RLG00000004598 RLG00000008951 RLG00000023176 RLG00000023289 RLG00000031269 |
| rosa_multiflora | Rmu_sc0006040.1_g000021 Rmu_sc0007628.1_g000001 Rmu_sc0008046.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00397260 Rroxscaffold_6G00413790 |
| rosa_rugosa | Rorug03G0215100 |
| rosa_samantha | Rh2BG228600 Rh3AG265500 Rh3BG301100 Rh3CG299400 Rh3DG295200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 68 |
| AfaI | GTAC | 1 cut(s) | 87 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 18, 19 |
| AflIII | ACRYGT | 1 cut(s) | 37 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 47, 79 |
| AluBI | AGCT | 4 cut(s) | 74, 96, 122, 184 |
| AluI | AGCT | 4 cut(s) | 74, 96, 122, 184 |
| AoxI | GGCC | 2 cut(s) | 21, 171 |
| AspS9I | GGNCC | 2 cut(s) | 21, 172 |
| BanII | GRGCYC | 1 cut(s) | 110 |
| BccI | CCATC | 1 cut(s) | 133 |
| BceAI | ACGGC | 1 cut(s) | 140 |
| BfaI | CTAG | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 2 cut(s) | 21, 172 |
| BmsI | GCATC | 2 cut(s) | 142, 201 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 63, 93 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 18, 19 |
| Bse1I | ACTGG | 1 cut(s) | 193 |
| BseGI | GGATG | 1 cut(s) | 148 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 18, 19 |
| BseNI | ACTGG | 1 cut(s) | 193 |
| BshFI | GGCC | 2 cut(s) | 23, 173 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 18, 19 |
| BsnI | GGCC | 2 cut(s) | 23, 173 |
| Bsp1286I | GDGCHC | 1 cut(s) | 110 |
| Bsp143I | GATC | 1 cut(s) | 60 |
| BspACI | CCGC | 1 cut(s) | 68 |
| BspANI | GGCC | 2 cut(s) | 23, 173 |
| BspQI | GCTCTTC | 1 cut(s) | 98 |
| BsrI | ACTGG | 1 cut(s) | 193 |
| BssMI | GATC | 1 cut(s) | 60 |
| Bst6I | CTCTTC | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 1 cut(s) | 25 |
| BstF5I | GGATG | 1 cut(s) | 148 |
| BstKTI | GATC | 1 cut(s) | 63 |
| BstMBI | GATC | 1 cut(s) | 60 |
| BstNSI | RCATGY | 1 cut(s) | 41 |
| BsuRI | GGCC | 2 cut(s) | 23, 173 |
| BtsCI | GGATG | 1 cut(s) | 148 |
| BtsIMutI | CAGTG | 1 cut(s) | 174 |
| Cac8I | GCNNGC | 1 cut(s) | 25 |
| Cfr13I | GGNCC | 2 cut(s) | 21, 172 |
| Csp6I | GTAC | 1 cut(s) | 86 |
| CviAII | CATG | 1 cut(s) | 38 |
| CviJI | RGCY | 7 cut(s) | 23, 74, 96, 108, 122, 173, 184 |
| CviKI_1 | RGCY | 7 cut(s) | 23, 74, 96, 108, 122, 173, 184 |
| CviQI | GTAC | 1 cut(s) | 86 |
| DpnI | GATC | 1 cut(s) | 62 |
| DpnII | GATC | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 1 cut(s) | 98 |
| EarI | CTCTTC | 1 cut(s) | 98 |
| Eco24I | GRGCYC | 1 cut(s) | 110 |
| EcoT38I | GRGCYC | 1 cut(s) | 110 |
| FaeI | CATG | 1 cut(s) | 41 |
| FaiI | YATR | 2 cut(s) | 39, 99 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 168, 200 |
| FatI | CATG | 1 cut(s) | 37 |
| FauI | CCCGC | 1 cut(s) | 61 |
| FokI | GGATG | 1 cut(s) | 155 |
| FriOI | GRGCYC | 1 cut(s) | 110 |
| FspBI | CTAG | 1 cut(s) | 205 |
| HaeIII | GGCC | 2 cut(s) | 23, 173 |
| Hin1II | CATG | 1 cut(s) | 41 |
| HindIII | AAGCTT | 1 cut(s) | 120 |
| HinfI | GANTC | 1 cut(s) | 164 |
| Hpy166II | GTNNAC | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 1 cut(s) | 197 |
| Hpy8I | GTNNAC | 1 cut(s) | 86 |
| Hsp92II | CATG | 1 cut(s) | 41 |
| Kzo9I | GATC | 1 cut(s) | 60 |
| LguI | GCTCTTC | 1 cut(s) | 98 |
| LmnI | GCTCC | 1 cut(s) | 71 |
| LpnPI | CCDG | 3 cut(s) | 37, 41, 174 |
| LweI | GCATC | 2 cut(s) | 142, 201 |
| MaeI | CTAG | 1 cut(s) | 205 |
| MalI | GATC | 1 cut(s) | 62 |
| MboI | GATC | 1 cut(s) | 60 |
| MboII | GAAGA | 1 cut(s) | 115 |
| MfeI | CAATTG | 1 cut(s) | 111 |
| MhlI | GDGCHC | 1 cut(s) | 110 |
| MluCI | AATT | 2 cut(s) | 56, 111 |
| MnlI | CCTC | 1 cut(s) | 37 |
| MseI | TTAA | 2 cut(s) | 51, 159 |
| MslI | CAYNNNNRTG | 1 cut(s) | 197 |
| MunI | CAATTG | 1 cut(s) | 111 |
| NdeII | GATC | 1 cut(s) | 60 |
| NlaIII | CATG | 1 cut(s) | 41 |
| NspI | RCATGY | 1 cut(s) | 41 |
| PciI | ACATGT | 1 cut(s) | 37 |
| PciSI | GCTCTTC | 1 cut(s) | 98 |
| PfeI | GAWTC | 1 cut(s) | 164 |
| PscI | ACATGT | 1 cut(s) | 37 |
| PspPI | GGNCC | 2 cut(s) | 21, 172 |
| RsaI | GTAC | 1 cut(s) | 87 |
| RsaNI | GTAC | 1 cut(s) | 86 |
| RseI | CAYNNNNRTG | 1 cut(s) | 197 |
| SapI | GCTCTTC | 1 cut(s) | 98 |
| SaqAI | TTAA | 2 cut(s) | 51, 159 |
| Sau3AI | GATC | 1 cut(s) | 60 |
| Sau96I | GGNCC | 2 cut(s) | 21, 172 |
| SduI | GDGCHC | 1 cut(s) | 110 |
| SetI | ASST | 6 cut(s) | 48, 76, 85, 98, 124, 186 |
| SfaNI | GCATC | 2 cut(s) | 142, 201 |
| SgeI | CNNG | 8 cut(s) | 36, 40, 50, 55, 76, 81, 188, 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 197 |
| Sse9I | AATT | 2 cut(s) | 56, 111 |
| SsiI | CCGC | 1 cut(s) | 68 |
| SspMI | CTAG | 1 cut(s) | 205 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 2 cut(s) | 56, 111 |
| TatI | WGTACW | 1 cut(s) | 85 |
| TfiI | GAWTC | 1 cut(s) | 164 |
| Tru1I | TTAA | 2 cut(s) | 51, 159 |
| Tru9I | TTAA | 2 cut(s) | 51, 159 |
| TscAI | CASTG | 1 cut(s) | 174 |
| TspDTI | ATGAA | 3 cut(s) | 17, 132, 177 |
| TspRI | CASTG | 1 cut(s) | 174 |
| XceI | RCATGY | 1 cut(s) | 41 |
| XspI | CTAG | 1 cut(s) | 205 |