pycom06g09680

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0002270
Physical Location & Seq
Reverse (-)
14986157 .. 14988959
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2361 bp
ATGAGAATAGGAGTGGCGACATCTTTGTTTACTCAGAAGTACACTCCTGACACTTGCCACAGGGAGCAGGATCGCTTCCATCTTTTTCGGTTAGAAAACCGTCGCTTTCTTCTCCACTTCATCCGAAACTCAAAGTTTCCCTCCCGTTCCGGAAATCGACTCGGTCGTCACGGATTCGCGTCCCTGCAAATGGTGTTCGGGACACAACTCACCCCTCCTTCTGAAGGCCACGACGACGAAGCCGAAACCGAAAATCCGACCGTCTCGGACCTGTTTTTGGCGCTGAGAGCGGCGTCTCGGCCGGAGGATTTCGGCCGAGTCGAACAGGCATTATCGGCGAGGGAAGCGAAACTGAGGCGAGAAATCGAGAAGCAGAGGTACGAGAACGCGCTGCTCGACGAGAAGCACGAGTTCGAGCGGCTCGAGAAGCTCAGAGCAGAGGAGGAGCTCAGGCTCAAGCTCTCACCGATCAAGGCGGAGGCGGTGAGCGAAGAGAACGGCGGCGAGGGCAGAGAGGTAATTTTGGAGCTCCGGACGCAGAACGAGGAGCTGGAGCGCCGCATTTCGCGGCTGGAGAAGGGCGGTAAGACATTGAGGAAGAAGGGTTTGAGTAACAGCATCCAGAGAAGAAGGAGCGATCGGTTGGCAGCAATCGGTGGTGATACCGCTGCTAACAATGATAGCGGTGAAGGTAGCTCTGCTCCGGTTAAAGGAAAGAACGCTCTGAGAATTTCAGGTTACAGAAGGAGCATACAGAAGCAGATAAGAAGGAAGATGGGGAAGAACAAGATGGAAAATTTGAGGTGGGGGAGAGGAGAAGAATATGTACAATACCGATGTAATATGCTGTCGTTTTTCAGTACAATGCAGCGAATTAAGGGACACTTAACTGAACGGCACTTGGAGTTGCTTCGACAGACTCCTTTTTGGCCATTAATATCCGCGTTTTACAGCGGTGTGATATCGGAAGATCAATGCAAGAAATCGGAGAGTGATGTCCGCGACATTATCAAGTGCTACAACTCAAGAACAATGAGTTTTCAGTTTGGTAGCACATCTGCATCGTTGACGACAGTAGACATGGCAGAAATTTTGGGACTTCCACAAGAAGGTGAAGAATTGAAGTTAAAGGGATCAAGAAGTTACAAATCAGATTTTGTCGAAAGATATTTTAACGCCAAAAGAGTGTATAAAACGTTGGTGGATAAAGCCTTGGACGACGCAATAGAAGGGAAAAGAGAAACAGACGTAGAGGATGTTGTACGCCTGATTTTGATAGAATTATGCATAACCTTTTTGTTATGTAACTCGGGCCAAGTTACTTCATGGAATTTAGTCAAGTATTGTGAGGATTTAGAAAGTATTTCAAGATATTCATGGGCGAAAGCTGTGGCTGACGTTCTGCACCAGGGATTGGAAAAAAGGACCGGGCGGTTCAAGCCATATTCTGTTCCTGGGTGCGTGGTTGCCATAATGCTTTGGTTGTGTGAGAGAACTAACCTCATACAACCAATCAAGGGAAGGGAGGGACAGAAACCAGCTCTCGTAAAATGGAGCATGCAGGAACTGCACTTGAAACTTAAACAAGTACATGTCGCAGACATTGGGTTGAGCTTTAAGAAGGACAAGGAGAGGAAGAAACTAGGAGAAAATGAAAAAGCACGCGAAGAAGCTATTATAACCAATGGACGAGAAGAACGAGAAGAATGGGAAAATGTGACTGGTGATACAGTGGGCGAATTGGAAGATCATCTCCGAGCTCGAAAGAGAAAAATGAAATTCGTCCGCGAACCCCCTATTTCAAAAAGGTTAAATGACAATGAGGACTTGGAAGAAAGATCAGAAGATGTTTGGAGAGTGATTCAGAATGCAAGTGCTGATCAAGGAAAAGTGAGTAGGCTAACTGAAAAGTTGGAGAGTAAGAAGGAAAAAACAAAAAAGTTGAAGAGGAAACTAAAAGAAGAAAAGAAGGAAAAGAGAAAGCTGAAAGAGGAAAATGAGGTCTTAACTTCTGAAAAGAAATCATTGTTTGATTCTCTGAAGAGGTTGGTGAAAATGCTGGAAGAAACTCTTGAAGCAGAAAGGGAAGCGGTGAAAAACCTAAAGAAAGAAAAAATGGAGCTGATCAAGGAAAATCGAGAACTCAAAGAAAAGCTCAATCAAGGAAGTCCATGCTCTGCAGTGCAATTGAGGGAGGACGTGCAACTTGAGGTATCTCCGATGCAATCCTTTTCGACAAGTCCTGAGAAAGGCGTCATGAAGAGGGTATTAGATTTGGAGGTTGAGGATGAACAGCGGGGCGAAAAGAAAAGGAAAGTAGACGAGGAAAGAAATGGAAAGAAGGGAGGATGTCCTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

787

Amino Acids

90.96

Weight (kDa)

9.27

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 334 - 525 3.1e-08 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1679
AasI GACNNNNNNGTC 1 cut(s) 165
AccB7I CCANNNNNTGG 1 cut(s) 1414
AccBSI CCGCTC 2 cut(s) 290, 418
AccI GTMKAC 2 cut(s) 1077, 2319
AccII CGCG 7 cut(s) 179, 389, 568, 944, 1002, 1665, 1788
AccIII TCCGGA 2 cut(s) 149, 531
AclI AACGTT 1 cut(s) 1196
AclWI GGATC 2 cut(s) 78, 1141
AcoI YGGCCR 3 cut(s) 299, 313, 929
AcsI RAATTY 5 cut(s) 729, 796, 1089, 1330, 1778
AcuI CTGAAG 2 cut(s) 243, 2060
AcyI GRCGYC 2 cut(s) 293, 2253
AfaI GTAC 6 cut(s) 41, 380, 828, 862, 1263, 1590
AfiI CCNNNNNNNGG 8 cut(s) 190, 224, 277, 710, 1109, 1414, 1517, 2249
AflIII ACRYGT 1 cut(s) 1591
AgsI TTSAA 7 cut(s) 1123, 1368, 1438, 1576, 1803, 1945, 2075
AjiI CACGTC 1 cut(s) 2200
AjnI CCWGG 2 cut(s) 1407, 1453
Alw21I GWGCWC 3 cut(s) 450, 531, 1762
Alw26I GTCTC 2 cut(s) 268, 300
AlwI GGATC 2 cut(s) 78, 1141
AlwNI CAGNNNCTG 1 cut(s) 1567
Ama87I CYCGRG 2 cut(s) 422, 1309
Aor13HI TCCGGA 2 cut(s) 149, 531
AoxI GGCC 5 cut(s) 226, 299, 313, 929, 1312
ApeKI GCWGC 4 cut(s) 391, 647, 668, 868
ApoI RAATTY 5 cut(s) 729, 796, 1089, 1330, 1778
AseI ATTAAT 1 cut(s) 935
AspLEI GCGC 3 cut(s) 283, 391, 558
AspS9I GGNCC 3 cut(s) 268, 1312, 1425
AsuC2I CCSGG 1 cut(s) 1429
AsuHPI GGTGA 9 cut(s) 202, 456, 496, 671, 698, 1124, 1736, 2062, 2104
AvaI CYCGRG 2 cut(s) 422, 1309
AvaII GGWCC 2 cut(s) 268, 1425
BalI TGGCCA 1 cut(s) 931
BanII GRGCYC 3 cut(s) 450, 531, 1762
BarI GAAGNNNNNNTAC 4 cut(s) 362, 394, 810, 842
BauI CACGAG 1 cut(s) 407
Bbv12I GWGCWC 3 cut(s) 450, 531, 1762
BbvI GCAGC 4 cut(s) 378, 655, 659, 880
BccI CCATC 3 cut(s) 87, 769, 784
BceAI ACGGC 2 cut(s) 514, 911
BciT130I CCWGG 2 cut(s) 1409, 1455
BclI TGATCA 2 cut(s) 1879, 2124
BcnI CCSGG 1 cut(s) 1429
BcoDI GTCTC 2 cut(s) 268, 300
BfaI CTAG 1 cut(s) 1643
BfmI CTRYAG 1 cut(s) 2178
BfoI RGCGCY 2 cut(s) 284, 559
BisI GCNGC 9 cut(s) 291, 392, 419, 502, 559, 569, 648, 669, 869
BlsI GCNGC 9 cut(s) 292, 393, 420, 503, 560, 570, 649, 670, 870
Bme1390I CCNGG 3 cut(s) 1409, 1429, 1455
Bme18I GGWCC 2 cut(s) 268, 1425
BmeT110I CYCGRG 2 cut(s) 422, 1309
BmgBI CACGTC 1 cut(s) 2200
BmgT120I GGNCC 3 cut(s) 268, 1312, 1425
BmrFI CCNGG 3 cut(s) 1409, 1429, 1455
BmsI GCATC 3 cut(s) 627, 1070, 2211
BpmI CTGGAG 2 cut(s) 572, 593
Bpu10I CCTNAGC 1 cut(s) 449
BpuEI CTTGAG 3 cut(s) 440, 1009, 2228
BpuMI CCSGG 1 cut(s) 1429
BsaHI GRCGYC 2 cut(s) 293, 2253
BsaJI CCNNGG 3 cut(s) 1212, 1408, 1454
BsaWI WCCGGW 3 cut(s) 149, 531, 703
Bsc4I CCNNNNNNNGG 8 cut(s) 190, 224, 277, 710, 1109, 1414, 1517, 2249
Bse1I ACTGG 1 cut(s) 1726
BseAI TCCGGA 2 cut(s) 149, 531
BseBI CCWGG 2 cut(s) 1409, 1455
BseDI CCNNGG 3 cut(s) 1212, 1408, 1454
BseGI GGATG 5 cut(s) 120, 618, 1261, 2293, 2354
BseLI CCNNNNNNNGG 8 cut(s) 190, 224, 277, 710, 1109, 1414, 1517, 2249
BseMII CTCAG 7 cut(s) 47, 275, 344, 445, 463, 716, 2235
BseNI ACTGG 1 cut(s) 1726
BseRI GAGGAG 4 cut(s) 455, 458, 560, 828
BseX3I CGGCCG 2 cut(s) 299, 313
BseXI GCAGC 4 cut(s) 378, 655, 659, 880
BsgI GTGCAG 2 cut(s) 1388, 1553
Bsh1236I CGCG 7 cut(s) 179, 389, 568, 944, 1002, 1665, 1788
Bsh1285I CGRYCG 5 cut(s) 166, 261, 302, 316, 640
BshFI GGCC 5 cut(s) 228, 301, 315, 931, 1314
BsiEI CGRYCG 5 cut(s) 166, 261, 302, 316, 640
BsiHKAI GWGCWC 3 cut(s) 450, 531, 1762
BsiHKCI CYCGRG 2 cut(s) 422, 1309
BsiSI CCGG 5 cut(s) 150, 302, 532, 704, 1428
BslFI GGGAC 5 cut(s) 166, 214, 894, 1110, 1542
BslI CCNNNNNNNGG 8 cut(s) 190, 224, 277, 710, 1109, 1414, 1517, 2249
BsmAI GTCTC 2 cut(s) 268, 300
BsmBI CGTCTC 2 cut(s) 268, 300
BsmFI GGGAC 5 cut(s) 166, 214, 894, 1110, 1542
BsmI GAATGC 1 cut(s) 1873
BsnI GGCC 5 cut(s) 228, 301, 315, 931, 1314
BsoBI CYCGRG 2 cut(s) 422, 1309
Bsp1286I GDGCHC 3 cut(s) 450, 531, 1762
Bsp13I TCCGGA 2 cut(s) 149, 531
Bsp1407I TGTACA 1 cut(s) 826
Bsp143I GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
BspANI GGCC 5 cut(s) 228, 301, 315, 931, 1314
BspCNI CTCAG 7 cut(s) 46, 276, 345, 444, 462, 717, 2236
BspEI TCCGGA 2 cut(s) 149, 531
BspFNI CGCG 7 cut(s) 179, 389, 568, 944, 1002, 1665, 1788
BspHI TCATGA 1 cut(s) 2256
BspMAI CTGCAG 1 cut(s) 2182
BspPI GGATC 2 cut(s) 78, 1141
BsrBI CCGCTC 2 cut(s) 290, 418
BsrGI TGTACA 1 cut(s) 826
BsrI ACTGG 1 cut(s) 1726
BssECI CCNNGG 3 cut(s) 1212, 1408, 1454
BssMI GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
BssNI GRCGYC 2 cut(s) 293, 2253
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 1212
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 2 cut(s) 1409, 1455
Bst4CI ACNGT 4 cut(s) 101, 262, 1075, 1732
Bst6I CTCTTC 4 cut(s) 486, 1940, 2036, 2255
BstACI GRCGYC 2 cut(s) 293, 2253
BstAPI GCANNNNNTGC 1 cut(s) 1567
BstAUI TGTACA 1 cut(s) 826
BstC8I GCNNGC 2 cut(s) 1559, 1663
BstDEI CTNAG 7 cut(s) 33, 284, 353, 431, 449, 725, 2244
BstENI CCTNNNNNAGG 2 cut(s) 222, 2247
BstF5I GGATG 5 cut(s) 120, 618, 1261, 2293, 2354
BstFNI CGCG 7 cut(s) 179, 389, 568, 944, 1002, 1665, 1788
BstH2I RGCGCY 2 cut(s) 284, 559
BstHHI GCGC 3 cut(s) 283, 391, 558
BstKTI GATC 9 cut(s) 73, 471, 640, 973, 1136, 1750, 1841, 1882, 2127
BstMAI GTCTC 2 cut(s) 268, 300
BstMBI GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
BstMCI CGRYCG 5 cut(s) 166, 261, 302, 316, 640
BstMWI GCNNNNNNNGC 8 cut(s) 287, 335, 344, 427, 507, 535, 1438, 1567
BstNI CCWGG 2 cut(s) 1409, 1455
BstNSI RCATGY 2 cut(s) 1561, 1595
BstSCI CCNGG 3 cut(s) 1407, 1427, 1453
BstSFI CTRYAG 1 cut(s) 2178
BstUI CGCG 7 cut(s) 179, 389, 568, 944, 1002, 1665, 1788
BstV1I GCAGC 4 cut(s) 378, 655, 659, 880
BstZI CGGCCG 2 cut(s) 299, 313
BsuRI GGCC 5 cut(s) 228, 301, 315, 931, 1314
BtrI CACGTC 1 cut(s) 2200
BtsCI GGATG 5 cut(s) 120, 618, 1261, 2293, 2354
BtsI GCAGTG 1 cut(s) 2187
BtsIMutI CAGTG 2 cut(s) 1737, 2187
Cac8I GCNNGC 2 cut(s) 1559, 1663
CaiI CAGNNNCTG 1 cut(s) 1567
CciI TCATGA 1 cut(s) 2256
CfoI GCGC 3 cut(s) 283, 391, 558
Cfr13I GGNCC 3 cut(s) 268, 1312, 1425
CseI GACGC 5 cut(s) 168, 282, 544, 1229, 2242
Csp6I GTAC 6 cut(s) 40, 379, 827, 861, 1262, 1589
CviAII CATG 7 cut(s) 1081, 1326, 1377, 1558, 1592, 2172, 2257
CviQI GTAC 6 cut(s) 40, 379, 827, 861, 1262, 1589
DdeI CTNAG 7 cut(s) 33, 284, 353, 431, 449, 725, 2244
DpnI GATC 9 cut(s) 72, 470, 639, 972, 1135, 1749, 1840, 1881, 2126
DpnII GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
DrdI GACNNNNNNGTC 1 cut(s) 165
DseDI GACNNNNNNGTC 1 cut(s) 165
EaeI YGGCCR 3 cut(s) 299, 313, 929
EagI CGGCCG 2 cut(s) 299, 313
Eam1104I CTCTTC 4 cut(s) 486, 1940, 2036, 2255
EarI CTCTTC 4 cut(s) 486, 1940, 2036, 2255
EciI GGCGGA 1 cut(s) 491
Ecl136II GAGCTC 3 cut(s) 448, 529, 1760
EclXI CGGCCG 2 cut(s) 299, 313
Eco130I CCWWGG 1 cut(s) 1212
Eco24I GRGCYC 3 cut(s) 450, 531, 1762
Eco32I GATATC 1 cut(s) 963
Eco47I GGWCC 2 cut(s) 268, 1425
Eco52I CGGCCG 2 cut(s) 299, 313
Eco53kI GAGCTC 3 cut(s) 448, 529, 1760
Eco57I CTGAAG 2 cut(s) 243, 2060
Eco88I CYCGRG 2 cut(s) 422, 1309
EcoICRI GAGCTC 3 cut(s) 448, 529, 1760
EcoNI CCTNNNNNAGG 2 cut(s) 222, 2247
EcoRII CCWGG 2 cut(s) 1407, 1453
EcoRV GATATC 1 cut(s) 963
EcoT14I CCWWGG 1 cut(s) 1212
EcoT22I ATGCAT 1 cut(s) 1289
EcoT38I GRGCYC 3 cut(s) 450, 531, 1762
ErhI CCWWGG 1 cut(s) 1212
Esp3I CGTCTC 2 cut(s) 268, 300
FaeI CATG 7 cut(s) 1084, 1329, 1380, 1561, 1595, 2175, 2260
FalI AAGNNNNNCTT 4 cut(s) 869, 901, 2055, 2087
FaqI GGGAC 5 cut(s) 166, 214, 894, 1110, 1542
FatI CATG 7 cut(s) 1080, 1325, 1376, 1557, 1591, 2171, 2256
FauI CCCGC 1 cut(s) 2289
FbaI TGATCA 2 cut(s) 1879, 2124
FblI GTMKAC 2 cut(s) 1077, 2319
Fnu4HI GCNGC 9 cut(s) 291, 392, 419, 502, 559, 569, 648, 669, 869
FokI GGATG 4 cut(s) 107, 605, 1268, 2300
FriOI GRGCYC 3 cut(s) 450, 531, 1762
Fsp4HI GCNGC 9 cut(s) 291, 392, 419, 502, 559, 569, 648, 669, 869
FspBI CTAG 1 cut(s) 1643
GlaI GCGC 3 cut(s) 282, 390, 557
GluI GCNGC 9 cut(s) 291, 392, 419, 502, 559, 569, 648, 669, 869
GsuI CTGGAG 2 cut(s) 572, 593
HaeII RGCGCY 2 cut(s) 284, 559
HaeIII GGCC 5 cut(s) 228, 301, 315, 931, 1314
HapII CCGG 5 cut(s) 150, 302, 532, 704, 1428
HgaI GACGC 5 cut(s) 168, 282, 544, 1229, 2242
HhaI GCGC 3 cut(s) 283, 391, 558
Hin1I GRCGYC 2 cut(s) 293, 2253
Hin1II CATG 7 cut(s) 1084, 1329, 1380, 1561, 1595, 2175, 2260
Hin6I GCGC 3 cut(s) 281, 389, 556
HinP1I GCGC 3 cut(s) 281, 389, 556
HincII GTYRAC 1 cut(s) 1068
HindII GTYRAC 1 cut(s) 1068
HinfI GANTC 6 cut(s) 159, 174, 318, 919, 1861, 2033
HpaII CCGG 5 cut(s) 150, 302, 532, 704, 1428
HphI GGTGA 9 cut(s) 202, 456, 496, 671, 698, 1124, 1736, 2062, 2104
Hpy166II GTNNAC 5 cut(s) 30, 42, 1068, 1078, 2320
Hpy8I GTNNAC 5 cut(s) 30, 42, 1068, 1078, 2320
Hpy99I CGWCG 5 cut(s) 105, 236, 239, 401, 1223
HpyCH4III ACNGT 4 cut(s) 101, 262, 1075, 1732
HpyCH4IV ACGT 4 cut(s) 1196, 1248, 1398, 2199
HpyF10VI GCNNNNNNNGC 8 cut(s) 287, 335, 344, 427, 507, 535, 1438, 1567
HpyF3I CTNAG 7 cut(s) 33, 284, 353, 431, 449, 725, 2244
HpySE526I ACGT 4 cut(s) 1196, 1248, 1398, 2199
Hsp92I GRCGYC 2 cut(s) 293, 2253
Hsp92II CATG 7 cut(s) 1084, 1329, 1380, 1561, 1595, 2175, 2260
HspAI GCGC 3 cut(s) 281, 389, 556
Kpn2I TCCGGA 2 cut(s) 149, 531
Ksp22I TGATCA 2 cut(s) 1879, 2124
Kzo9I GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
Lsp1109I GCAGC 4 cut(s) 378, 655, 659, 880
LweI GCATC 3 cut(s) 627, 1070, 2211
MaeI CTAG 1 cut(s) 1643
MaeII ACGT 4 cut(s) 1196, 1248, 1398, 2199
MaeIII GTNAC 7 cut(s) 167, 611, 737, 1142, 1304, 1318, 1717
MalI GATC 9 cut(s) 72, 470, 639, 972, 1135, 1749, 1840, 1881, 2126
MbiI CCGCTC 2 cut(s) 290, 418
MboI GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
MfeI CAATTG 1 cut(s) 2186
MhlI GDGCHC 3 cut(s) 450, 531, 1762
MlsI TGGCCA 1 cut(s) 931
MluNI TGGCCA 1 cut(s) 931
MlyI GAGTC 3 cut(s) 153, 327, 913
MmeI TCCRAC 2 cut(s) 281, 1893
Mox20I TGGCCA 1 cut(s) 931
Mph1103I ATGCAT 1 cut(s) 1289
MroI TCCGGA 2 cut(s) 149, 531
MscI TGGCCA 1 cut(s) 931
Msp20I TGGCCA 1 cut(s) 931
MspA1I CMGCKG 3 cut(s) 668, 954, 2296
MspI CCGG 5 cut(s) 150, 302, 532, 704, 1428
MspR9I CCNGG 3 cut(s) 1409, 1429, 1455
MunI CAATTG 1 cut(s) 2186
Mva1269I GAATGC 1 cut(s) 1873
MvaI CCWGG 2 cut(s) 1409, 1455
MvnI CGCG 7 cut(s) 179, 389, 568, 944, 1002, 1665, 1788
MwoI GCNNNNNNNGC 8 cut(s) 287, 335, 344, 427, 507, 535, 1438, 1567
NciI CCSGG 1 cut(s) 1429
NdeII GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
NlaIII CATG 7 cut(s) 1084, 1329, 1380, 1561, 1595, 2175, 2260
NmeAIII GCCGAG 2 cut(s) 277, 341
NmuCI GTSAC 2 cut(s) 167, 1717
NsiI ATGCAT 1 cut(s) 1289
NspI RCATGY 2 cut(s) 1561, 1595
PaeI GCATGC 1 cut(s) 1561
PaeR7I CTCGAG 1 cut(s) 422
PagI TCATGA 1 cut(s) 2256
PciI ACATGT 1 cut(s) 1591
PcsI WCGNNNNNNNCGW 7 cut(s) 163, 240, 318, 393, 405, 420, 1696
PctI GAATGC 1 cut(s) 1873
PfeI GAWTC 3 cut(s) 174, 1861, 2033
PflFI GACNNNGTC 1 cut(s) 162
PflMI CCANNNNNTGG 1 cut(s) 1414
PkrI GCNGC 9 cut(s) 292, 393, 420, 503, 560, 570, 649, 670, 870
Ple19I CGATCG 1 cut(s) 640
PleI GAGTC 3 cut(s) 153, 326, 913
PpsI GAGTC 3 cut(s) 153, 326, 913
PscI ACATGT 1 cut(s) 1591
PshBI ATTAAT 1 cut(s) 935
PsiI TTATAA 1 cut(s) 1679
Psp124BI GAGCTC 3 cut(s) 450, 531, 1762
Psp1406I AACGTT 1 cut(s) 1196
Psp6I CCWGG 2 cut(s) 1407, 1453
PspGI CCWGG 2 cut(s) 1407, 1453
PspPI GGNCC 3 cut(s) 268, 1312, 1425
PstI CTGCAG 1 cut(s) 2182
PstNI CAGNNNCTG 1 cut(s) 1567
PsyI GACNNNGTC 1 cut(s) 162
PvuI CGATCG 1 cut(s) 640
RsaI GTAC 6 cut(s) 41, 380, 828, 862, 1263, 1590
RsaNI GTAC 6 cut(s) 40, 379, 827, 861, 1262, 1589
SacI GAGCTC 3 cut(s) 450, 531, 1762
SatI GCNGC 9 cut(s) 291, 392, 419, 502, 559, 569, 648, 669, 869
Sau3AI GATC 9 cut(s) 70, 468, 637, 970, 1133, 1747, 1838, 1879, 2124
Sau96I GGNCC 3 cut(s) 268, 1312, 1425
SchI GAGTC 3 cut(s) 153, 327, 913
ScrFI CCNGG 3 cut(s) 1409, 1429, 1455
SduI GDGCHC 3 cut(s) 450, 531, 1762
SfaNI GCATC 3 cut(s) 627, 1070, 2211
SfcI CTRYAG 1 cut(s) 2178
Sfr274I CTCGAG 1 cut(s) 422
SinI GGWCC 2 cut(s) 268, 1425
SlaI CTCGAG 1 cut(s) 422
SmlI CTYRAG 4 cut(s) 422, 455, 1024, 2207
SmoI CTYRAG 4 cut(s) 422, 455, 1024, 2207
SphI GCATGC 1 cut(s) 1561
SspMI CTAG 1 cut(s) 1643
SstI GAGCTC 3 cut(s) 450, 531, 1762
StyD4I CCNGG 3 cut(s) 1407, 1427, 1453
StyI CCWWGG 1 cut(s) 1212
TaaI ACNGT 4 cut(s) 101, 262, 1075, 1732
TaiI ACGT 4 cut(s) 1199, 1251, 1401, 2202
TaqII GACCGA 1 cut(s) 152
TatI WGTACW 4 cut(s) 39, 826, 860, 1588
TauI GCSGC 5 cut(s) 293, 421, 504, 561, 571
TfiI GAWTC 3 cut(s) 174, 1861, 2033
TscAI CASTG 2 cut(s) 1737, 2187
TseFI GTSAC 2 cut(s) 167, 1717
TseI GCWGC 4 cut(s) 391, 647, 668, 868
Tsp45I GTSAC 2 cut(s) 167, 1717
TspDTI ATGAA 7 cut(s) 109, 1314, 1365, 1668, 1790, 2273, 2304
TspGWI ACGGA 1 cut(s) 186
TspRI CASTG 2 cut(s) 1737, 2187
Tth111I GACNNNGTC 1 cut(s) 162
Van91I CCANNNNNTGG 1 cut(s) 1414
VpaK11BI GGWCC 2 cut(s) 268, 1425
VspI ATTAAT 1 cut(s) 935
XagI CCTNNNNNAGG 2 cut(s) 222, 2247
XapI RAATTY 5 cut(s) 729, 796, 1089, 1330, 1778
XceI RCATGY 2 cut(s) 1561, 1595
XhoI CTCGAG 1 cut(s) 422
XmiI GTMKAC 2 cut(s) 1077, 2319
XspI CTAG 1 cut(s) 1643
Zsp2I ATGCAT 1 cut(s) 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.