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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g28941 |
| pyrus_communis | pycom05g01990 pycom08g14640 |
| rosa_chinensis | RchiOBHm_Chr1g0376501 |
| rosa_laevigata | RLG00000026605 |
| rosa_multiflora | Rmu_sc0000996.1_g000014 Rmu_sc0001198.1_g000011 Rmu_sc0001308.1_g000025 Rmu_sc0001308.1_g000032 Rmu_sc0001308.1_g000034 Rmu_sc0001308.1_g000039 Rmu_sc0001308.1_g000040 Rmu_sc0001308.1_g000048 |
| rosa_roxburghii | Rroxscaffold_4G00282050 |
| rosa_rugosa | Rorug01G0185700 |
| rosa_samantha | Rh1AG408200 Rh1AG408700 Rh1AG408800 Rh1AG409800 Rh1AG409900 Rh1AG410200 Rh1AG410500 Rh1BG371700 Rh1CG384400 Rh1CG385400 Rh1DG401300 Rh1DG402400 Rh1DG402500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 864, 1167, 1173 |
| AarI | CACCTGC | 1 cut(s) | 1381 |
| Acc36I | ACCTGC | 1 cut(s) | 1381 |
| AccB1I | GGYRCC | 2 cut(s) | 69, 620 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 386, 958 |
| AccBSI | CCGCTC | 2 cut(s) | 655, 683 |
| AccI | GTMKAC | 2 cut(s) | 53, 1362 |
| AccII | CGCG | 1 cut(s) | 13 |
| AccIII | TCCGGA | 2 cut(s) | 558, 929 |
| AciI | CCGC | 9 cut(s) | 212, 215, 239, 318, 351, 359, 653, 681, 1266 |
| AclWI | GGATC | 3 cut(s) | 404, 560, 569 |
| AcoI | YGGCCR | 2 cut(s) | 216, 240 |
| AcsI | RAATTY | 3 cut(s) | 336, 954, 980 |
| AdeI | CACNNNGTG | 2 cut(s) | 386, 785 |
| AfaI | GTAC | 4 cut(s) | 235, 789, 913, 1135 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 208, 386, 447, 725, 730, 865, 936, 958 |
| AflIII | ACRYGT | 2 cut(s) | 11, 1365 |
| AgsI | TTSAA | 7 cut(s) | 1026, 1103, 1194, 1222, 1253, 1358, 1387 |
| AjiI | CACGTC | 1 cut(s) | 1368 |
| AjnI | CCWGG | 1 cut(s) | 807 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 326, 358, 528, 560 |
| AluBI | AGCT | 4 cut(s) | 144, 757, 804, 1005 |
| AluI | AGCT | 4 cut(s) | 144, 757, 804, 1005 |
| Alw26I | GTCTC | 2 cut(s) | 640, 688 |
| AlwI | GGATC | 3 cut(s) | 404, 560, 569 |
| Aor13HI | TCCGGA | 2 cut(s) | 558, 929 |
| AoxI | GGCC | 4 cut(s) | 216, 240, 856, 1224 |
| ApeKI | GCWGC | 4 cut(s) | 315, 804, 1185, 1292 |
| ApoI | RAATTY | 3 cut(s) | 336, 954, 980 |
| AspLEI | GCGC | 1 cut(s) | 48 |
| AspS9I | GGNCC | 4 cut(s) | 198, 300, 395, 739 |
| AsuHPI | GGTGA | 4 cut(s) | 269, 757, 1135, 1362 |
| AvaII | GGWCC | 4 cut(s) | 198, 300, 395, 739 |
| BanI | GGYRCC | 2 cut(s) | 69, 620 |
| BbsI | GAAGAC | 4 cut(s) | 316, 707, 787, 1085 |
| BbvI | GCAGC | 4 cut(s) | 302, 791, 1172, 1304 |
| BccI | CCATC | 8 cut(s) | 98, 304, 579, 956, 1061, 1148, 1172, 1385 |
| BceAI | ACGGC | 6 cut(s) | 57, 252, 713, 747, 871, 1280 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 454, 488 |
| BciT130I | CCWGG | 1 cut(s) | 809 |
| BcoDI | GTCTC | 2 cut(s) | 640, 688 |
| BfaI | CTAG | 5 cut(s) | 491, 686, 783, 801, 1016 |
| BfuAI | ACCTGC | 1 cut(s) | 1381 |
| BisI | GCNGC | 9 cut(s) | 213, 216, 240, 316, 352, 359, 805, 1186, 1293 |
| BlsI | GCNGC | 9 cut(s) | 214, 217, 241, 317, 353, 360, 806, 1187, 1294 |
| Bme1390I | CCNGG | 1 cut(s) | 809 |
| Bme18I | GGWCC | 4 cut(s) | 198, 300, 395, 739 |
| BmgBI | CACGTC | 1 cut(s) | 1368 |
| BmgT120I | GGNCC | 4 cut(s) | 198, 300, 395, 739 |
| BmiI | GGNNCC | 9 cut(s) | 71, 200, 226, 250, 301, 331, 622, 701, 963 |
| BmrFI | CCNGG | 1 cut(s) | 809 |
| BmsI | GCATC | 7 cut(s) | 45, 127, 149, 983, 1077, 1254, 1399 |
| BpiI | GAAGAC | 4 cut(s) | 316, 707, 787, 1085 |
| BpmI | CTGGAG | 1 cut(s) | 980 |
| Bsa29I | ATCGAT | 1 cut(s) | 564 |
| BsaI | GGTCTC | 1 cut(s) | 640 |
| BsaJI | CCNNGG | 6 cut(s) | 183, 380, 724, 745, 853, 965 |
| BsaWI | WCCGGW | 2 cut(s) | 558, 929 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 35, 65, 953, 983, 1220, 1250 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 208, 386, 447, 725, 730, 865, 936, 958 |
| Bse118I | RCCGGY | 2 cut(s) | 347, 481 |
| Bse1I | ACTGG | 2 cut(s) | 909, 1146 |
| Bse3DI | GCAATG | 1 cut(s) | 500 |
| BseAI | TCCGGA | 2 cut(s) | 558, 929 |
| BseBI | CCWGG | 1 cut(s) | 809 |
| BseCI | ATCGAT | 1 cut(s) | 564 |
| BseDI | CCNNGG | 6 cut(s) | 183, 380, 724, 745, 853, 965 |
| BseGI | GGATG | 2 cut(s) | 948, 1377 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 208, 386, 447, 725, 730, 865, 936, 958 |
| BseMI | GCAATG | 1 cut(s) | 500 |
| BseMII | CTCAG | 1 cut(s) | 89 |
| BseNI | ACTGG | 2 cut(s) | 909, 1146 |
| BseRI | GAGGAG | 5 cut(s) | 56, 628, 696, 699, 1204 |
| BseX3I | CGGCCG | 2 cut(s) | 216, 240 |
| BseXI | GCAGC | 4 cut(s) | 302, 791, 1172, 1304 |
| Bsh1236I | CGCG | 1 cut(s) | 13 |
| Bsh1285I | CGRYCG | 2 cut(s) | 219, 243 |
| BshFI | GGCC | 4 cut(s) | 218, 242, 858, 1226 |
| BshNI | GGYRCC | 2 cut(s) | 69, 620 |
| BshVI | ATCGAT | 1 cut(s) | 564 |
| BsiEI | CGRYCG | 2 cut(s) | 219, 243 |
| BsiSI | CCGG | 5 cut(s) | 348, 482, 511, 559, 930 |
| BslFI | GGGAC | 2 cut(s) | 313, 1294 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 208, 386, 447, 725, 730, 865, 936, 958 |
| BsmAI | GTCTC | 2 cut(s) | 640, 688 |
| BsmBI | CGTCTC | 1 cut(s) | 688 |
| BsmFI | GGGAC | 2 cut(s) | 313, 1294 |
| BsnI | GGCC | 4 cut(s) | 218, 242, 858, 1226 |
| Bso31I | GGTCTC | 1 cut(s) | 640 |
| Bsp13I | TCCGGA | 2 cut(s) | 558, 929 |
| Bsp1407I | TGTACA | 1 cut(s) | 787 |
| Bsp143I | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| Bsp19I | CCATGG | 1 cut(s) | 724 |
| BspACI | CCGC | 9 cut(s) | 212, 215, 239, 318, 351, 359, 653, 681, 1266 |
| BspANI | GGCC | 4 cut(s) | 218, 242, 858, 1226 |
| BspCNI | CTCAG | 1 cut(s) | 90 |
| BspDI | ATCGAT | 1 cut(s) | 564 |
| BspEI | TCCGGA | 2 cut(s) | 558, 929 |
| BspFNI | CGCG | 1 cut(s) | 13 |
| BspHI | TCATGA | 1 cut(s) | 306 |
| BspLI | GGNNCC | 9 cut(s) | 71, 200, 226, 250, 301, 331, 622, 701, 963 |
| BspMI | ACCTGC | 1 cut(s) | 1381 |
| BspPI | GGATC | 3 cut(s) | 404, 560, 569 |
| BspQI | GCTCTTC | 1 cut(s) | 662 |
| BspT107I | GGYRCC | 2 cut(s) | 69, 620 |
| BspTNI | GGTCTC | 1 cut(s) | 640 |
| BsrBI | CCGCTC | 2 cut(s) | 655, 683 |
| BsrDI | GCAATG | 1 cut(s) | 500 |
| BsrFI | RCCGGY | 2 cut(s) | 347, 481 |
| BsrGI | TGTACA | 1 cut(s) | 787 |
| BsrI | ACTGG | 2 cut(s) | 909, 1146 |
| BssAI | RCCGGY | 2 cut(s) | 347, 481 |
| BssECI | CCNNGG | 6 cut(s) | 183, 380, 724, 745, 853, 965 |
| BssMI | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| BssNAI | GTATAC | 2 cut(s) | 54, 1363 |
| BssT1I | CCWWGG | 4 cut(s) | 183, 724, 745, 965 |
| Bst1107I | GTATAC | 2 cut(s) | 54, 1363 |
| Bst2UI | CCWGG | 1 cut(s) | 809 |
| Bst4CI | ACNGT | 3 cut(s) | 224, 248, 906 |
| Bst6I | CTCTTC | 3 cut(s) | 347, 560, 662 |
| BstAUI | TGTACA | 1 cut(s) | 787 |
| BstC8I | GCNNGC | 7 cut(s) | 142, 349, 356, 483, 516, 580, 1331 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstDSI | CCRYGG | 3 cut(s) | 380, 724, 853 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 863 |
| BstF5I | GGATG | 2 cut(s) | 948, 1377 |
| BstFNI | CGCG | 1 cut(s) | 13 |
| BstHHI | GCGC | 1 cut(s) | 48 |
| BstKTI | GATC | 7 cut(s) | 106, 412, 468, 564, 568, 630, 1202 |
| BstMAI | GTCTC | 2 cut(s) | 640, 688 |
| BstMBI | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| BstMCI | CGRYCG | 2 cut(s) | 219, 243 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 168, 511, 680, 970, 1002, 1292 |
| BstNI | CCWGG | 1 cut(s) | 809 |
| BstSCI | CCNGG | 1 cut(s) | 807 |
| BstUI | CGCG | 1 cut(s) | 13 |
| BstV1I | GCAGC | 4 cut(s) | 302, 791, 1172, 1304 |
| BstV2I | GAAGAC | 4 cut(s) | 316, 707, 787, 1085 |
| BstX2I | RGATCY | 1 cut(s) | 409 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 631 |
| BstYI | RGATCY | 1 cut(s) | 409 |
| BstZ17I | GTATAC | 2 cut(s) | 54, 1363 |
| BstZI | CGGCCG | 2 cut(s) | 216, 240 |
| Bsu15I | ATCGAT | 1 cut(s) | 564 |
| BsuRI | GGCC | 4 cut(s) | 218, 242, 858, 1226 |
| BsuTUI | ATCGAT | 1 cut(s) | 564 |
| BtgI | CCRYGG | 3 cut(s) | 380, 724, 853 |
| BtgZI | GCGATG | 1 cut(s) | 1006 |
| BtrI | CACGTC | 1 cut(s) | 1368 |
| BtsCI | GGATG | 2 cut(s) | 948, 1377 |
| BveI | ACCTGC | 1 cut(s) | 1381 |
| Cac8I | GCNNGC | 7 cut(s) | 142, 349, 356, 483, 516, 580, 1331 |
| CciI | TCATGA | 1 cut(s) | 306 |
| CfoI | GCGC | 1 cut(s) | 48 |
| Cfr10I | RCCGGY | 2 cut(s) | 347, 481 |
| Cfr13I | GGNCC | 4 cut(s) | 198, 300, 395, 739 |
| ClaI | ATCGAT | 1 cut(s) | 564 |
| CseI | GACGC | 3 cut(s) | 2, 19, 1079 |
| Csp6I | GTAC | 4 cut(s) | 234, 788, 912, 1134 |
| CviAII | CATG | 4 cut(s) | 289, 307, 631, 725 |
| CviQI | GTAC | 4 cut(s) | 234, 788, 912, 1134 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DpnI | GATC | 7 cut(s) | 105, 411, 467, 563, 567, 629, 1201 |
| DpnII | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| DraIII | CACNNNGTG | 2 cut(s) | 386, 785 |
| EaeI | YGGCCR | 2 cut(s) | 216, 240 |
| EagI | CGGCCG | 2 cut(s) | 216, 240 |
| Eam1104I | CTCTTC | 3 cut(s) | 347, 560, 662 |
| EarI | CTCTTC | 3 cut(s) | 347, 560, 662 |
| EclXI | CGGCCG | 2 cut(s) | 216, 240 |
| Eco130I | CCWWGG | 4 cut(s) | 183, 724, 745, 965 |
| Eco31I | GGTCTC | 1 cut(s) | 640 |
| Eco47I | GGWCC | 4 cut(s) | 198, 300, 395, 739 |
| Eco52I | CGGCCG | 2 cut(s) | 216, 240 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 863 |
| EcoO109I | RGGNCCY | 2 cut(s) | 198, 300 |
| EcoRII | CCWGG | 1 cut(s) | 807 |
| EcoT14I | CCWWGG | 4 cut(s) | 183, 724, 745, 965 |
| EcoT22I | ATGCAT | 1 cut(s) | 38 |
| ErhI | CCWWGG | 4 cut(s) | 183, 724, 745, 965 |
| Esp3I | CGTCTC | 1 cut(s) | 688 |
| FaeI | CATG | 4 cut(s) | 292, 310, 634, 728 |
| FaqI | GGGAC | 2 cut(s) | 313, 1294 |
| FatI | CATG | 4 cut(s) | 288, 306, 630, 724 |
| FauI | CCCGC | 1 cut(s) | 688 |
| FblI | GTMKAC | 2 cut(s) | 53, 1362 |
| Fnu4HI | GCNGC | 9 cut(s) | 213, 216, 240, 316, 352, 359, 805, 1186, 1293 |
| FokI | GGATG | 2 cut(s) | 935, 1364 |
| Fsp4HI | GCNGC | 9 cut(s) | 213, 216, 240, 316, 352, 359, 805, 1186, 1293 |
| FspBI | CTAG | 5 cut(s) | 491, 686, 783, 801, 1016 |
| GlaI | GCGC | 1 cut(s) | 47 |
| GluI | GCNGC | 9 cut(s) | 213, 216, 240, 316, 352, 359, 805, 1186, 1293 |
| GsuI | CTGGAG | 1 cut(s) | 980 |
| HaeIII | GGCC | 4 cut(s) | 218, 242, 858, 1226 |
| HapII | CCGG | 5 cut(s) | 348, 482, 511, 559, 930 |
| HgaI | GACGC | 3 cut(s) | 2, 19, 1079 |
| HhaI | GCGC | 1 cut(s) | 48 |
| Hin1II | CATG | 4 cut(s) | 292, 310, 634, 728 |
| Hin6I | GCGC | 1 cut(s) | 46 |
| HinP1I | GCGC | 1 cut(s) | 46 |
| HincII | GTYRAC | 2 cut(s) | 453, 902 |
| HindII | GTYRAC | 2 cut(s) | 453, 902 |
| HinfI | GANTC | 9 cut(s) | 260, 321, 390, 529, 549, 917, 926, 1190, 1271 |
| HpaII | CCGG | 5 cut(s) | 348, 482, 511, 559, 930 |
| HphI | GGTGA | 4 cut(s) | 269, 757, 1135, 1362 |
| Hpy166II | GTNNAC | 7 cut(s) | 54, 419, 453, 765, 788, 902, 1363 |
| Hpy188I | TCNGA | 4 cut(s) | 268, 395, 414, 1403 |
| Hpy188III | TCNNGA | 6 cut(s) | 307, 533, 559, 686, 930, 959 |
| Hpy8I | GTNNAC | 7 cut(s) | 54, 419, 453, 765, 788, 902, 1363 |
| Hpy99I | CGWCG | 5 cut(s) | 24, 224, 248, 578, 671 |
| HpyAV | CCTTC | 4 cut(s) | 313, 729, 1129, 1228 |
| HpyCH4III | ACNGT | 3 cut(s) | 224, 248, 906 |
| HpyCH4IV | ACGT | 3 cut(s) | 669, 814, 1367 |
| HpyCH4V | TGCA | 6 cut(s) | 36, 123, 140, 171, 292, 611 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 168, 511, 680, 970, 1002, 1292 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| HpySE526I | ACGT | 3 cut(s) | 669, 814, 1367 |
| Hsp92II | CATG | 4 cut(s) | 292, 310, 634, 728 |
| HspAI | GCGC | 1 cut(s) | 46 |
| Kpn2I | TCCGGA | 2 cut(s) | 558, 929 |
| KroI | GCCGGC | 2 cut(s) | 347, 481 |
| KroNI | GCCGGC | 2 cut(s) | 349, 483 |
| Kzo9I | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| LguI | GCTCTTC | 1 cut(s) | 662 |
| LmnI | GCTCC | 6 cut(s) | 4, 43, 122, 335, 705, 961 |
| Lsp1109I | GCAGC | 4 cut(s) | 302, 791, 1172, 1304 |
| LweI | GCATC | 7 cut(s) | 45, 127, 149, 983, 1077, 1254, 1399 |
| MaeI | CTAG | 5 cut(s) | 491, 686, 783, 801, 1016 |
| MaeII | ACGT | 3 cut(s) | 669, 814, 1367 |
| MaeIII | GTNAC | 4 cut(s) | 62, 74, 815, 1368 |
| MalI | GATC | 7 cut(s) | 105, 411, 467, 563, 567, 629, 1201 |
| MbiI | CCGCTC | 2 cut(s) | 655, 683 |
| MboI | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| MfeI | CAATTG | 1 cut(s) | 1382 |
| MflI | RGATCY | 1 cut(s) | 409 |
| MluCI | AATT | 7 cut(s) | 112, 336, 880, 954, 980, 1168, 1382 |
| MluI | ACGCGT | 1 cut(s) | 11 |
| MlyI | GAGTC | 4 cut(s) | 269, 330, 523, 920 |
| MmeI | TCCRAC | 2 cut(s) | 291, 526 |
| Mph1103I | ATGCAT | 1 cut(s) | 38 |
| MreI | CGCCGGCG | 1 cut(s) | 347 |
| MroI | TCCGGA | 2 cut(s) | 558, 929 |
| MroNI | GCCGGC | 2 cut(s) | 347, 481 |
| MseI | TTAA | 3 cut(s) | 110, 129, 942 |
| MslI | CAYNNNNRTG | 1 cut(s) | 828 |
| MspI | CCGG | 5 cut(s) | 348, 482, 511, 559, 930 |
| MspR9I | CCNGG | 1 cut(s) | 809 |
| MunI | CAATTG | 1 cut(s) | 1382 |
| MvaI | CCWGG | 1 cut(s) | 809 |
| MvnI | CGCG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 168, 511, 680, 970, 1002, 1292 |
| NaeI | GCCGGC | 2 cut(s) | 349, 483 |
| NcoI | CCATGG | 1 cut(s) | 724 |
| NdeII | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| NgoMIV | GCCGGC | 2 cut(s) | 347, 481 |
| NlaIII | CATG | 4 cut(s) | 292, 310, 634, 728 |
| NlaIV | GGNNCC | 9 cut(s) | 71, 200, 226, 250, 301, 331, 622, 701, 963 |
| NmeAIII | GCCGAG | 1 cut(s) | 999 |
| NmuCI | GTSAC | 2 cut(s) | 62, 1368 |
| NsiI | ATGCAT | 1 cut(s) | 38 |
| PagI | TCATGA | 1 cut(s) | 306 |
| PaqCI | CACCTGC | 1 cut(s) | 1381 |
| PciSI | GCTCTTC | 1 cut(s) | 662 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 99, 570 |
| PdiI | GCCGGC | 2 cut(s) | 349, 483 |
| PfeI | GAWTC | 5 cut(s) | 390, 549, 917, 1190, 1271 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 386, 958 |
| PkrI | GCNGC | 9 cut(s) | 214, 217, 241, 317, 353, 360, 806, 1187, 1294 |
| PleI | GAGTC | 4 cut(s) | 268, 329, 523, 920 |
| PpsI | GAGTC | 4 cut(s) | 268, 329, 523, 920 |
| PpuMI | RGGWCCY | 2 cut(s) | 198, 300 |
| PsiI | TTATAA | 3 cut(s) | 864, 1167, 1173 |
| Psp5II | RGGWCCY | 2 cut(s) | 198, 300 |
| Psp6I | CCWGG | 1 cut(s) | 807 |
| PspGI | CCWGG | 1 cut(s) | 807 |
| PspN4I | GGNNCC | 9 cut(s) | 71, 200, 226, 250, 301, 331, 622, 701, 963 |
| PspPI | GGNCC | 4 cut(s) | 198, 300, 395, 739 |
| PspPPI | RGGWCCY | 2 cut(s) | 198, 300 |
| PsuI | RGATCY | 1 cut(s) | 409 |
| RsaI | GTAC | 4 cut(s) | 235, 789, 913, 1135 |
| RsaNI | GTAC | 4 cut(s) | 234, 788, 912, 1134 |
| RseI | CAYNNNNRTG | 1 cut(s) | 828 |
| SapI | GCTCTTC | 1 cut(s) | 662 |
| SaqAI | TTAA | 3 cut(s) | 110, 129, 942 |
| SatI | GCNGC | 9 cut(s) | 213, 216, 240, 316, 352, 359, 805, 1186, 1293 |
| Sau3AI | GATC | 7 cut(s) | 103, 409, 465, 561, 565, 627, 1199 |
| Sau96I | GGNCC | 4 cut(s) | 198, 300, 395, 739 |
| SchI | GAGTC | 4 cut(s) | 269, 330, 523, 920 |
| ScrFI | CCNGG | 1 cut(s) | 809 |
| SfaNI | GCATC | 7 cut(s) | 45, 127, 149, 983, 1077, 1254, 1399 |
| SgrAI | CRCCGGYG | 1 cut(s) | 347 |
| SinI | GGWCC | 4 cut(s) | 198, 300, 395, 739 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 828 |
| Sse9I | AATT | 7 cut(s) | 112, 336, 880, 954, 980, 1168, 1382 |
| SsiI | CCGC | 9 cut(s) | 212, 215, 239, 318, 351, 359, 653, 681, 1266 |
| SspMI | CTAG | 5 cut(s) | 491, 686, 783, 801, 1016 |
| StyD4I | CCNGG | 1 cut(s) | 807 |
| StyI | CCWWGG | 4 cut(s) | 183, 724, 745, 965 |
| TaaI | ACNGT | 3 cut(s) | 224, 248, 906 |
| TaiI | ACGT | 3 cut(s) | 672, 817, 1370 |
| TaqI | TCGA | 7 cut(s) | 39, 93, 527, 534, 564, 666, 1206 |
| TasI | AATT | 7 cut(s) | 112, 336, 880, 954, 980, 1168, 1382 |
| TatI | WGTACW | 1 cut(s) | 787 |
| TauI | GCSGC | 5 cut(s) | 215, 218, 242, 354, 361 |
| TfiI | GAWTC | 5 cut(s) | 390, 549, 917, 1190, 1271 |
| Tru1I | TTAA | 3 cut(s) | 110, 129, 942 |
| Tru9I | TTAA | 3 cut(s) | 110, 129, 942 |
| TseFI | GTSAC | 2 cut(s) | 62, 1368 |
| TseI | GCWGC | 4 cut(s) | 315, 804, 1185, 1292 |
| Tsp45I | GTSAC | 2 cut(s) | 62, 1368 |
| TspDTI | ATGAA | 2 cut(s) | 295, 846 |
| TspGWI | ACGGA | 2 cut(s) | 71, 397 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 386, 958 |
| VpaK11BI | GGWCC | 4 cut(s) | 198, 300, 395, 739 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 863 |
| XapI | RAATTY | 3 cut(s) | 336, 954, 980 |
| XbaI | TCTAGA | 1 cut(s) | 685 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 955 |
| XmiI | GTMKAC | 2 cut(s) | 53, 1362 |
| XspI | CTAG | 5 cut(s) | 491, 686, 783, 801, 1016 |
| Zsp2I | ATGCAT | 1 cut(s) | 38 |