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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g28941 |
| pyrus_communis | pycom05g01990 pycom08g14640 |
| rosa_chinensis | RchiOBHm_Chr1g0376501 |
| rosa_laevigata | RLG00000026605 |
| rosa_multiflora | Rmu_sc0000996.1_g000014 Rmu_sc0001198.1_g000011 Rmu_sc0001308.1_g000025 Rmu_sc0001308.1_g000032 Rmu_sc0001308.1_g000034 Rmu_sc0001308.1_g000039 Rmu_sc0001308.1_g000040 Rmu_sc0001308.1_g000048 |
| rosa_roxburghii | Rroxscaffold_4G00282050 |
| rosa_rugosa | Rorug01G0185700 |
| rosa_samantha | Rh1AG408200 Rh1AG408700 Rh1AG408800 Rh1AG409800 Rh1AG409900 Rh1AG410200 Rh1AG410500 Rh1BG371700 Rh1CG384400 Rh1CG385400 Rh1DG401300 Rh1DG402400 Rh1DG402500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 808 |
| AccB1I | GGYRCC | 1 cut(s) | 671 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 502 |
| AccBSI | CCGCTC | 1 cut(s) | 608 |
| AccI | GTMKAC | 2 cut(s) | 384, 708 |
| AccII | CGCG | 1 cut(s) | 696 |
| AccIII | TCCGGA | 2 cut(s) | 466, 613 |
| AciI | CCGC | 7 cut(s) | 7, 342, 606, 694, 725, 769, 1257 |
| AclWI | GGATC | 6 cut(s) | 232, 328, 604, 624, 1121, 1164 |
| AcsI | RAATTY | 5 cut(s) | 462, 470, 677, 1406, 1478 |
| AcuI | CTGAAG | 1 cut(s) | 1435 |
| AfaI | GTAC | 3 cut(s) | 524, 782, 1456 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 502, 548, 593, 600, 873 |
| AflIII | ACRYGT | 1 cut(s) | 387 |
| AgsI | TTSAA | 4 cut(s) | 350, 476, 1208, 1348 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 67 |
| AhlI | ACTAGT | 1 cut(s) | 886 |
| AjiI | CACGTC | 1 cut(s) | 721 |
| AjnI | CCWGG | 1 cut(s) | 135 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1311, 1343 |
| AluBI | AGCT | 8 cut(s) | 218, 449, 499, 561, 928, 978, 1232, 1314 |
| AluI | AGCT | 8 cut(s) | 218, 449, 499, 561, 928, 978, 1232, 1314 |
| Alw21I | GWGCWC | 1 cut(s) | 971 |
| Alw26I | GTCTC | 1 cut(s) | 101 |
| AlwI | GGATC | 6 cut(s) | 232, 328, 604, 624, 1121, 1164 |
| Ama87I | CYCGRG | 1 cut(s) | 923 |
| Aor13HI | TCCGGA | 2 cut(s) | 466, 613 |
| AoxI | GGCC | 3 cut(s) | 138, 539, 603 |
| ApeKI | GCWGC | 3 cut(s) | 1088, 1314, 1387 |
| ApoI | RAATTY | 5 cut(s) | 462, 470, 677, 1406, 1478 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 8, 40, 290, 322 |
| AspLEI | GCGC | 1 cut(s) | 1200 |
| AspS9I | GGNCC | 1 cut(s) | 603 |
| AsuC2I | CCSGG | 1 cut(s) | 798 |
| AsuHPI | GGTGA | 3 cut(s) | 471, 1133, 1274 |
| AsuII | TTCGAA | 2 cut(s) | 1065, 1079 |
| AvaI | CYCGRG | 1 cut(s) | 923 |
| BaeGI | GKGCMC | 1 cut(s) | 674 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 690, 723, 1438, 1471 |
| BanI | GGYRCC | 1 cut(s) | 671 |
| BanII | GRGCYC | 1 cut(s) | 805 |
| BauI | CACGAG | 1 cut(s) | 450 |
| BbsI | GAAGAC | 2 cut(s) | 482, 883 |
| Bbv12I | GWGCWC | 1 cut(s) | 971 |
| BbvI | GCAGC | 3 cut(s) | 1075, 1301, 1399 |
| BccI | CCATC | 5 cut(s) | 149, 194, 496, 993, 1287 |
| BceAI | ACGGC | 2 cut(s) | 554, 1250 |
| BciT130I | CCWGG | 1 cut(s) | 137 |
| BciVI | GTATCC | 1 cut(s) | 143 |
| BclI | TGATCA | 1 cut(s) | 454 |
| BcnI | CCSGG | 1 cut(s) | 798 |
| BcoDI | GTCTC | 1 cut(s) | 101 |
| BcuI | ACTAGT | 1 cut(s) | 886 |
| BfaI | CTAG | 2 cut(s) | 887, 1092 |
| BfmI | CTRYAG | 3 cut(s) | 815, 1245, 1411 |
| BfuAI | ACCTGC | 1 cut(s) | 808 |
| BfuI | GTATCC | 1 cut(s) | 143 |
| BglII | AGATCT | 2 cut(s) | 200, 1379 |
| BisI | GCNGC | 4 cut(s) | 606, 1089, 1315, 1388 |
| BlsI | GCNGC | 4 cut(s) | 607, 1090, 1316, 1389 |
| Bme1390I | CCNGG | 2 cut(s) | 137, 798 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 67 |
| BmeT110I | CYCGRG | 1 cut(s) | 923 |
| BmgBI | CACGTC | 1 cut(s) | 721 |
| BmgT120I | GGNCC | 1 cut(s) | 603 |
| BmiI | GGNNCC | 4 cut(s) | 649, 673, 729, 802 |
| BmrFI | CCNGG | 2 cut(s) | 137, 798 |
| BmrI | ACTGGG | 1 cut(s) | 1199 |
| BmsI | GCATC | 3 cut(s) | 1032, 1297, 1406 |
| BmuI | ACTGGG | 1 cut(s) | 1199 |
| BpiI | GAAGAC | 2 cut(s) | 482, 883 |
| BpmI | CTGGAG | 1 cut(s) | 181 |
| Bpu14I | TTCGAA | 2 cut(s) | 1065, 1079 |
| BpuMI | CCSGG | 1 cut(s) | 798 |
| BsaAI | YACGTR | 1 cut(s) | 388 |
| BsaBI | GATNNNNATC | 2 cut(s) | 185, 506 |
| BsaJI | CCNNGG | 3 cut(s) | 277, 378, 796 |
| BsaWI | WCCGGW | 4 cut(s) | 466, 593, 613, 703 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 146, 176 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 502, 548, 593, 600, 873 |
| Bse118I | RCCGGY | 1 cut(s) | 338 |
| Bse1I | ACTGG | 4 cut(s) | 1194, 1223, 1399, 1458 |
| Bse8I | GATNNNNATC | 2 cut(s) | 185, 506 |
| BseAI | TCCGGA | 2 cut(s) | 466, 613 |
| BseBI | CCWGG | 1 cut(s) | 137 |
| BseDI | CCNNGG | 3 cut(s) | 277, 378, 796 |
| BseGI | GGATG | 3 cut(s) | 619, 981, 1395 |
| BseJI | GATNNNNATC | 2 cut(s) | 185, 506 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 502, 548, 593, 600, 873 |
| BseMII | CTCAG | 4 cut(s) | 338, 984, 1215, 1374 |
| BseNI | ACTGG | 4 cut(s) | 1194, 1223, 1399, 1458 |
| BseRI | GAGGAG | 3 cut(s) | 553, 854, 859 |
| BseSI | GKGCMC | 1 cut(s) | 674 |
| BseXI | GCAGC | 3 cut(s) | 1075, 1301, 1399 |
| BseYI | CCCAGC | 2 cut(s) | 495, 557 |
| BsgI | GTGCAG | 1 cut(s) | 681 |
| Bsh1236I | CGCG | 1 cut(s) | 696 |
| BshFI | GGCC | 3 cut(s) | 140, 541, 605 |
| BshNI | GGYRCC | 1 cut(s) | 671 |
| BsiHKAI | GWGCWC | 1 cut(s) | 971 |
| BsiHKCI | CYCGRG | 1 cut(s) | 923 |
| BsiSI | CCGG | 6 cut(s) | 339, 467, 594, 614, 704, 798 |
| BslFI | GGGAC | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 502, 548, 593, 600, 873 |
| BsmAI | GTCTC | 1 cut(s) | 101 |
| BsmFI | GGGAC | 1 cut(s) | 116 |
| BsnI | GGCC | 3 cut(s) | 140, 541, 605 |
| BsoBI | CYCGRG | 1 cut(s) | 923 |
| Bsp119I | TTCGAA | 2 cut(s) | 1065, 1079 |
| Bsp1286I | GDGCHC | 3 cut(s) | 674, 805, 971 |
| Bsp13I | TCCGGA | 2 cut(s) | 466, 613 |
| BspACI | CCGC | 7 cut(s) | 7, 342, 606, 694, 725, 769, 1257 |
| BspANI | GGCC | 3 cut(s) | 140, 541, 605 |
| BspCNI | CTCAG | 4 cut(s) | 337, 983, 1216, 1375 |
| BspEI | TCCGGA | 2 cut(s) | 466, 613 |
| BspFNI | CGCG | 1 cut(s) | 696 |
| BspHI | TCATGA | 1 cut(s) | 763 |
| BspLI | GGNNCC | 4 cut(s) | 649, 673, 729, 802 |
| BspMAI | CTGCAG | 2 cut(s) | 819, 1415 |
| BspMI | ACCTGC | 1 cut(s) | 808 |
| BspPI | GGATC | 6 cut(s) | 232, 328, 604, 624, 1121, 1164 |
| BspQI | GCTCTTC | 1 cut(s) | 615 |
| BspT104I | TTCGAA | 2 cut(s) | 1065, 1079 |
| BspT107I | GGYRCC | 1 cut(s) | 671 |
| BsrBI | CCGCTC | 1 cut(s) | 608 |
| BsrFI | RCCGGY | 1 cut(s) | 338 |
| BsrI | ACTGG | 4 cut(s) | 1194, 1223, 1399, 1458 |
| BssAI | RCCGGY | 1 cut(s) | 338 |
| BssECI | CCNNGG | 3 cut(s) | 277, 378, 796 |
| BssSI | CACGAG | 1 cut(s) | 450 |
| BssT1I | CCWWGG | 2 cut(s) | 277, 378 |
| Bst2BI | CACGAG | 1 cut(s) | 450 |
| Bst2UI | CCWGG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 5 cut(s) | 112, 131, 488, 522, 780 |
| Bst6I | CTCTTC | 2 cut(s) | 615, 1349 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1314, 1410 |
| BstBAI | YACGTR | 1 cut(s) | 388 |
| BstBI | TTCGAA | 2 cut(s) | 1065, 1079 |
| BstC8I | GCNNGC | 2 cut(s) | 340, 694 |
| BstDEI | CTNAG | 4 cut(s) | 324, 970, 1224, 1383 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 546 |
| BstF5I | GGATG | 3 cut(s) | 619, 981, 1395 |
| BstFNI | CGCG | 1 cut(s) | 696 |
| BstHHI | GCGC | 1 cut(s) | 1200 |
| BstMAI | GTCTC | 1 cut(s) | 101 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 409, 558, 975, 1314, 1320, 1410 |
| BstNI | CCWGG | 1 cut(s) | 137 |
| BstSCI | CCNGG | 2 cut(s) | 135, 796 |
| BstSFI | CTRYAG | 3 cut(s) | 815, 1245, 1411 |
| BstSLI | GKGCMC | 1 cut(s) | 674 |
| BstUI | CGCG | 1 cut(s) | 696 |
| BstV1I | GCAGC | 3 cut(s) | 1075, 1301, 1399 |
| BstV2I | GAAGAC | 2 cut(s) | 482, 883 |
| BstX2I | RGATCY | 5 cut(s) | 200, 224, 320, 1169, 1379 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 644, 946, 1189 |
| BstYI | RGATCY | 5 cut(s) | 200, 224, 320, 1169, 1379 |
| BsuI | GTATCC | 1 cut(s) | 143 |
| BsuRI | GGCC | 3 cut(s) | 140, 541, 605 |
| BtrI | CACGTC | 1 cut(s) | 721 |
| BtsCI | GGATG | 3 cut(s) | 619, 981, 1395 |
| BtsIMutI | CAGTG | 4 cut(s) | 117, 1187, 1406, 1465 |
| BveI | ACCTGC | 1 cut(s) | 808 |
| Cac8I | GCNNGC | 2 cut(s) | 340, 694 |
| CciI | TCATGA | 1 cut(s) | 763 |
| CfoI | GCGC | 1 cut(s) | 1200 |
| Cfr10I | RCCGGY | 1 cut(s) | 338 |
| Cfr13I | GGNCC | 1 cut(s) | 603 |
| Csp6I | GTAC | 3 cut(s) | 523, 781, 1455 |
| CviAII | CATG | 5 cut(s) | 88, 301, 458, 764, 898 |
| CviQI | GTAC | 3 cut(s) | 523, 781, 1455 |
| DdeI | CTNAG | 4 cut(s) | 324, 970, 1224, 1383 |
| DriI | GACNNNNNGTC | 1 cut(s) | 67 |
| Eam1104I | CTCTTC | 2 cut(s) | 615, 1349 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 67 |
| EarI | CTCTTC | 2 cut(s) | 615, 1349 |
| EciI | GGCGGA | 3 cut(s) | 22, 357, 740 |
| Eco130I | CCWWGG | 2 cut(s) | 277, 378 |
| Eco24I | GRGCYC | 1 cut(s) | 805 |
| Eco57I | CTGAAG | 1 cut(s) | 1435 |
| Eco88I | CYCGRG | 1 cut(s) | 923 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 546 |
| EcoRI | GAATTC | 1 cut(s) | 462 |
| EcoRII | CCWGG | 1 cut(s) | 135 |
| EcoT14I | CCWWGG | 2 cut(s) | 277, 378 |
| EcoT38I | GRGCYC | 1 cut(s) | 805 |
| ErhI | CCWWGG | 2 cut(s) | 277, 378 |
| FaeI | CATG | 5 cut(s) | 91, 304, 461, 767, 901 |
| FaqI | GGGAC | 1 cut(s) | 116 |
| FatI | CATG | 5 cut(s) | 87, 300, 457, 763, 897 |
| FauI | CCCGC | 1 cut(s) | 701 |
| FbaI | TGATCA | 1 cut(s) | 454 |
| FblI | GTMKAC | 2 cut(s) | 384, 708 |
| Fnu4HI | GCNGC | 4 cut(s) | 606, 1089, 1315, 1388 |
| FokI | GGATG | 3 cut(s) | 606, 968, 1382 |
| FriOI | GRGCYC | 1 cut(s) | 805 |
| Fsp4HI | GCNGC | 4 cut(s) | 606, 1089, 1315, 1388 |
| FspBI | CTAG | 2 cut(s) | 887, 1092 |
| GlaI | GCGC | 1 cut(s) | 1199 |
| GluI | GCNGC | 4 cut(s) | 606, 1089, 1315, 1388 |
| GsaI | CCCAGC | 2 cut(s) | 499, 561 |
| GsuI | CTGGAG | 1 cut(s) | 181 |
| HaeIII | GGCC | 3 cut(s) | 140, 541, 605 |
| HapII | CCGG | 6 cut(s) | 339, 467, 594, 614, 704, 798 |
| HhaI | GCGC | 1 cut(s) | 1200 |
| Hin1II | CATG | 5 cut(s) | 91, 304, 461, 767, 901 |
| Hin6I | GCGC | 1 cut(s) | 1198 |
| HinP1I | GCGC | 1 cut(s) | 1198 |
| HindIII | AAGCTT | 1 cut(s) | 1230 |
| HinfI | GANTC | 1 cut(s) | 68 |
| HpaII | CCGG | 6 cut(s) | 339, 467, 594, 614, 704, 798 |
| HphI | GGTGA | 3 cut(s) | 471, 1133, 1274 |
| Hpy166II | GTNNAC | 4 cut(s) | 117, 385, 518, 709 |
| Hpy188I | TCNGA | 7 cut(s) | 172, 180, 327, 369, 1225, 1384, 1496 |
| Hpy8I | GTNNAC | 4 cut(s) | 117, 385, 518, 709 |
| Hpy99I | CGWCG | 1 cut(s) | 290 |
| HpyAV | CCTTC | 2 cut(s) | 506, 815 |
| HpyCH4III | ACNGT | 5 cut(s) | 112, 131, 488, 522, 780 |
| HpyCH4IV | ACGT | 3 cut(s) | 288, 387, 720 |
| HpyCH4V | TGCA | 6 cut(s) | 662, 817, 1308, 1377, 1404, 1413 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 409, 558, 975, 1314, 1320, 1410 |
| HpyF3I | CTNAG | 4 cut(s) | 324, 970, 1224, 1383 |
| HpySE526I | ACGT | 3 cut(s) | 288, 387, 720 |
| Hsp92II | CATG | 5 cut(s) | 91, 304, 461, 767, 901 |
| HspAI | GCGC | 1 cut(s) | 1198 |
| Kpn2I | TCCGGA | 2 cut(s) | 466, 613 |
| KroI | GCCGGC | 1 cut(s) | 338 |
| KroNI | GCCGGC | 1 cut(s) | 340 |
| Ksp22I | TGATCA | 1 cut(s) | 454 |
| LguI | GCTCTTC | 1 cut(s) | 615 |
| LmnI | GCTCC | 3 cut(s) | 566, 727, 800 |
| Lsp1109I | GCAGC | 3 cut(s) | 1075, 1301, 1399 |
| LweI | GCATC | 3 cut(s) | 1032, 1297, 1406 |
| MaeI | CTAG | 2 cut(s) | 887, 1092 |
| MaeII | ACGT | 3 cut(s) | 288, 387, 720 |
| MaeIII | GTNAC | 2 cut(s) | 125, 1487 |
| MbiI | CCGCTC | 1 cut(s) | 608 |
| MboII | GAAGA | 6 cut(s) | 482, 602, 883, 1048, 1336, 1343 |
| MfeI | CAATTG | 1 cut(s) | 1114 |
| MflI | RGATCY | 5 cut(s) | 200, 224, 320, 1169, 1379 |
| MhlI | GDGCHC | 3 cut(s) | 674, 805, 971 |
| MluCI | AATT | 8 cut(s) | 462, 470, 677, 957, 1114, 1406, 1436, 1478 |
| MlyI | GAGTC | 1 cut(s) | 77 |
| MmeI | TCCRAC | 2 cut(s) | 372, 1179 |
| MroI | TCCGGA | 2 cut(s) | 466, 613 |
| MroNI | GCCGGC | 1 cut(s) | 338 |
| MseI | TTAA | 1 cut(s) | 954 |
| MslI | CAYNNNNRTG | 3 cut(s) | 92, 739, 944 |
| MspA1I | CMGCKG | 1 cut(s) | 499 |
| MspI | CCGG | 6 cut(s) | 339, 467, 594, 614, 704, 798 |
| MspR9I | CCNGG | 2 cut(s) | 137, 798 |
| MunI | CAATTG | 1 cut(s) | 1114 |
| MvaI | CCWGG | 1 cut(s) | 137 |
| MvnI | CGCG | 1 cut(s) | 696 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 409, 558, 975, 1314, 1320, 1410 |
| NaeI | GCCGGC | 1 cut(s) | 340 |
| NciI | CCSGG | 1 cut(s) | 798 |
| NgoMIV | GCCGGC | 1 cut(s) | 338 |
| NlaIII | CATG | 5 cut(s) | 91, 304, 461, 767, 901 |
| NlaIV | GGNNCC | 4 cut(s) | 649, 673, 729, 802 |
| NspV | TTCGAA | 2 cut(s) | 1065, 1079 |
| PaeR7I | CTCGAG | 1 cut(s) | 923 |
| PagI | TCATGA | 1 cut(s) | 763 |
| PciSI | GCTCTTC | 1 cut(s) | 615 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 150, 294, 1297 |
| PdiI | GCCGGC | 1 cut(s) | 340 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 502 |
| PkrI | GCNGC | 4 cut(s) | 607, 1090, 1316, 1389 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| Ppu21I | YACGTR | 1 cut(s) | 388 |
| Psp6I | CCWGG | 1 cut(s) | 135 |
| PspFI | CCCAGC | 2 cut(s) | 495, 557 |
| PspGI | CCWGG | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 4 cut(s) | 649, 673, 729, 802 |
| PspPI | GGNCC | 1 cut(s) | 603 |
| PstI | CTGCAG | 2 cut(s) | 819, 1415 |
| PsuI | RGATCY | 5 cut(s) | 200, 224, 320, 1169, 1379 |
| PvuII | CAGCTG | 1 cut(s) | 499 |
| RsaI | GTAC | 3 cut(s) | 524, 782, 1456 |
| RsaNI | GTAC | 3 cut(s) | 523, 781, 1455 |
| RseI | CAYNNNNRTG | 3 cut(s) | 92, 739, 944 |
| SapI | GCTCTTC | 1 cut(s) | 615 |
| SaqAI | TTAA | 1 cut(s) | 954 |
| SatI | GCNGC | 4 cut(s) | 606, 1089, 1315, 1388 |
| Sau96I | GGNCC | 1 cut(s) | 603 |
| SchI | GAGTC | 1 cut(s) | 77 |
| ScrFI | CCNGG | 2 cut(s) | 137, 798 |
| SduI | GDGCHC | 3 cut(s) | 674, 805, 971 |
| SfaNI | GCATC | 3 cut(s) | 1032, 1297, 1406 |
| SfcI | CTRYAG | 3 cut(s) | 815, 1245, 1411 |
| Sfr274I | CTCGAG | 1 cut(s) | 923 |
| SfuI | TTCGAA | 2 cut(s) | 1065, 1079 |
| SlaI | CTCGAG | 1 cut(s) | 923 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 92, 739, 944 |
| SmlI | CTYRAG | 1 cut(s) | 923 |
| SmoI | CTYRAG | 1 cut(s) | 923 |
| SpeI | ACTAGT | 1 cut(s) | 886 |
| Sse9I | AATT | 8 cut(s) | 462, 470, 677, 957, 1114, 1406, 1436, 1478 |
| SsiI | CCGC | 7 cut(s) | 7, 342, 606, 694, 725, 769, 1257 |
| SspI | AATATT | 1 cut(s) | 1070 |
| SspMI | CTAG | 2 cut(s) | 887, 1092 |
| StyD4I | CCNGG | 2 cut(s) | 135, 796 |
| StyI | CCWWGG | 2 cut(s) | 277, 378 |
| TaaI | ACNGT | 5 cut(s) | 112, 131, 488, 522, 780 |
| TaiI | ACGT | 3 cut(s) | 291, 390, 723 |
| TaqII | GACCGA | 1 cut(s) | 167 |
| TasI | AATT | 8 cut(s) | 462, 470, 677, 957, 1114, 1406, 1436, 1478 |
| TauI | GCSGC | 1 cut(s) | 608 |
| Tru1I | TTAA | 1 cut(s) | 954 |
| Tru9I | TTAA | 1 cut(s) | 954 |
| TscAI | CASTG | 4 cut(s) | 117, 1194, 1406, 1465 |
| TseI | GCWGC | 3 cut(s) | 1088, 1314, 1387 |
| TspDTI | ATGAA | 4 cut(s) | 35, 762, 914, 970 |
| TspGWI | ACGGA | 1 cut(s) | 1127 |
| TspRI | CASTG | 4 cut(s) | 117, 1194, 1406, 1465 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 502 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 546 |
| XapI | RAATTY | 5 cut(s) | 462, 470, 677, 1406, 1478 |
| XhoI | CTCGAG | 1 cut(s) | 923 |
| XmiI | GTMKAC | 2 cut(s) | 384, 708 |
| XspI | CTAG | 2 cut(s) | 887, 1092 |