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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g28941 |
| pyrus_communis | pycom05g01990 pycom08g14640 |
| rosa_chinensis | RchiOBHm_Chr1g0376501 |
| rosa_laevigata | RLG00000026605 |
| rosa_multiflora | Rmu_sc0000996.1_g000014 Rmu_sc0001198.1_g000011 Rmu_sc0001308.1_g000025 Rmu_sc0001308.1_g000032 Rmu_sc0001308.1_g000034 Rmu_sc0001308.1_g000039 Rmu_sc0001308.1_g000040 Rmu_sc0001308.1_g000048 |
| rosa_roxburghii | Rroxscaffold_4G00282050 |
| rosa_rugosa | Rorug01G0185700 |
| rosa_samantha | Rh1AG408200 Rh1AG408700 Rh1AG408800 Rh1AG409800 Rh1AG409900 Rh1AG410200 Rh1AG410500 Rh1BG371700 Rh1CG384400 Rh1CG385400 Rh1DG401300 Rh1DG402400 Rh1DG402500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 422 |
| AciI | CCGC | 2 cut(s) | 360, 582 |
| AclWI | GGATC | 2 cut(s) | 224, 267 |
| AcsI | RAATTY | 3 cut(s) | 59, 575, 647 |
| AcuI | CTGAAG | 1 cut(s) | 604 |
| AfaI | GTAC | 2 cut(s) | 457, 625 |
| AfeI | AGCGCT | 1 cut(s) | 71 |
| AgsI | TTSAA | 2 cut(s) | 311, 517 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 480, 512 |
| AluBI | AGCT | 5 cut(s) | 31, 81, 335, 368, 483 |
| AluI | AGCT | 5 cut(s) | 31, 81, 335, 368, 483 |
| AlwI | GGATC | 2 cut(s) | 224, 267 |
| Ama87I | CYCGRG | 1 cut(s) | 26 |
| Aor51HI | AGCGCT | 1 cut(s) | 71 |
| ApeKI | GCWGC | 3 cut(s) | 191, 483, 556 |
| ApoI | RAATTY | 3 cut(s) | 59, 575, 647 |
| AspLEI | GCGC | 3 cut(s) | 72, 303, 423 |
| AsuHPI | GGTGA | 2 cut(s) | 236, 377 |
| AsuII | TTCGAA | 2 cut(s) | 168, 182 |
| AvaI | CYCGRG | 1 cut(s) | 26 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 607, 640 |
| BbvI | GCAGC | 3 cut(s) | 178, 470, 568 |
| BccI | CCATC | 2 cut(s) | 96, 390 |
| BfaI | CTAG | 1 cut(s) | 195 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BfoI | RGCGCY | 1 cut(s) | 73 |
| BglII | AGATCT | 1 cut(s) | 548 |
| BisI | GCNGC | 3 cut(s) | 192, 484, 557 |
| BlsI | GCNGC | 3 cut(s) | 193, 485, 558 |
| BmeT110I | CYCGRG | 1 cut(s) | 26 |
| BmrI | ACTGGG | 1 cut(s) | 302 |
| BmsI | GCATC | 3 cut(s) | 135, 400, 575 |
| BmuI | ACTGGG | 1 cut(s) | 302 |
| Bpu14I | TTCGAA | 2 cut(s) | 168, 182 |
| Bse118I | RCCGGY | 1 cut(s) | 387 |
| Bse1I | ACTGG | 4 cut(s) | 297, 326, 568, 627 |
| BseGI | GGATG | 3 cut(s) | 84, 564, 590 |
| BseMII | CTCAG | 3 cut(s) | 87, 318, 543 |
| BseNI | ACTGG | 4 cut(s) | 297, 326, 568, 627 |
| BseXI | GCAGC | 3 cut(s) | 178, 470, 568 |
| BsiHKCI | CYCGRG | 1 cut(s) | 26 |
| BsiSI | CCGG | 1 cut(s) | 388 |
| BsmI | GAATGC | 1 cut(s) | 423 |
| BsoBI | CYCGRG | 1 cut(s) | 26 |
| Bsp119I | TTCGAA | 2 cut(s) | 168, 182 |
| Bsp1407I | TGTACA | 1 cut(s) | 455 |
| Bsp143I | GATC | 4 cut(s) | 16, 229, 272, 548 |
| BspACI | CCGC | 2 cut(s) | 360, 582 |
| BspCNI | CTCAG | 3 cut(s) | 86, 319, 544 |
| BspHI | TCATGA | 1 cut(s) | 435 |
| BspPI | GGATC | 2 cut(s) | 224, 267 |
| BspT104I | TTCGAA | 2 cut(s) | 168, 182 |
| BsrFI | RCCGGY | 1 cut(s) | 387 |
| BsrGI | TGTACA | 1 cut(s) | 455 |
| BsrI | ACTGG | 4 cut(s) | 297, 326, 568, 627 |
| BssAI | RCCGGY | 1 cut(s) | 387 |
| BssMI | GATC | 4 cut(s) | 16, 229, 272, 548 |
| Bst6I | CTCTTC | 1 cut(s) | 518 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 483, 579 |
| BstAUI | TGTACA | 1 cut(s) | 455 |
| BstBI | TTCGAA | 2 cut(s) | 168, 182 |
| BstDEI | CTNAG | 3 cut(s) | 73, 327, 552 |
| BstF5I | GGATG | 3 cut(s) | 84, 564, 590 |
| BstH2I | RGCGCY | 1 cut(s) | 73 |
| BstHHI | GCGC | 3 cut(s) | 72, 303, 423 |
| BstKTI | GATC | 4 cut(s) | 19, 232, 275, 551 |
| BstMBI | GATC | 4 cut(s) | 16, 229, 272, 548 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 78, 483, 489, 579 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstV1I | GCAGC | 3 cut(s) | 178, 470, 568 |
| BstX2I | RGATCY | 2 cut(s) | 272, 548 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 49, 292 |
| BstYI | RGATCY | 2 cut(s) | 272, 548 |
| BtsCI | GGATG | 3 cut(s) | 84, 564, 590 |
| BtsIMutI | CAGTG | 3 cut(s) | 290, 575, 634 |
| CciI | TCATGA | 1 cut(s) | 435 |
| CfoI | GCGC | 3 cut(s) | 72, 303, 423 |
| Cfr10I | RCCGGY | 1 cut(s) | 387 |
| Csp6I | GTAC | 2 cut(s) | 456, 624 |
| CviAII | CATG | 2 cut(s) | 429, 436 |
| CviJI | RGCY | 5 cut(s) | 31, 81, 335, 368, 483 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 81, 335, 368, 483 |
| CviQI | GTAC | 2 cut(s) | 456, 624 |
| DdeI | CTNAG | 3 cut(s) | 73, 327, 552 |
| DpnI | GATC | 4 cut(s) | 18, 231, 274, 550 |
| DpnII | GATC | 4 cut(s) | 16, 229, 272, 548 |
| Eam1104I | CTCTTC | 1 cut(s) | 518 |
| EarI | CTCTTC | 1 cut(s) | 518 |
| Eco47III | AGCGCT | 1 cut(s) | 71 |
| Eco57I | CTGAAG | 1 cut(s) | 604 |
| Eco88I | CYCGRG | 1 cut(s) | 26 |
| FaeI | CATG | 2 cut(s) | 432, 439 |
| FatI | CATG | 2 cut(s) | 428, 435 |
| Fnu4HI | GCNGC | 3 cut(s) | 192, 484, 557 |
| FokI | GGATG | 3 cut(s) | 71, 551, 597 |
| Fsp4HI | GCNGC | 3 cut(s) | 192, 484, 557 |
| FspAI | RTGCGCAY | 1 cut(s) | 422 |
| FspBI | CTAG | 1 cut(s) | 195 |
| FspI | TGCGCA | 1 cut(s) | 422 |
| GlaI | GCGC | 3 cut(s) | 71, 302, 422 |
| GluI | GCNGC | 3 cut(s) | 192, 484, 557 |
| HaeII | RGCGCY | 1 cut(s) | 73 |
| HapII | CCGG | 1 cut(s) | 388 |
| HhaI | GCGC | 3 cut(s) | 72, 303, 423 |
| Hin1II | CATG | 2 cut(s) | 432, 439 |
| Hin6I | GCGC | 3 cut(s) | 70, 301, 421 |
| HinP1I | GCGC | 3 cut(s) | 70, 301, 421 |
| HindIII | AAGCTT | 1 cut(s) | 333 |
| HpaII | CCGG | 1 cut(s) | 388 |
| HphI | GGTGA | 2 cut(s) | 236, 377 |
| Hpy188I | TCNGA | 3 cut(s) | 328, 553, 665 |
| Hpy188III | TCNNGA | 4 cut(s) | 26, 200, 436, 500 |
| HpyCH4V | TGCA | 3 cut(s) | 477, 546, 573 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 78, 483, 489, 579 |
| HpyF3I | CTNAG | 3 cut(s) | 73, 327, 552 |
| Hsp92II | CATG | 2 cut(s) | 432, 439 |
| HspAI | GCGC | 3 cut(s) | 70, 301, 421 |
| Kzo9I | GATC | 4 cut(s) | 16, 229, 272, 548 |
| LpnPI | CCDG | 9 cut(s) | 20, 213, 226, 278, 307, 401, 581, 639, 640 |
| Lsp1109I | GCAGC | 3 cut(s) | 178, 470, 568 |
| LweI | GCATC | 3 cut(s) | 135, 400, 575 |
| MaeI | CTAG | 1 cut(s) | 195 |
| MaeIII | GTNAC | 1 cut(s) | 656 |
| MalI | GATC | 4 cut(s) | 18, 231, 274, 550 |
| MboI | GATC | 4 cut(s) | 16, 229, 272, 548 |
| MboII | GAAGA | 3 cut(s) | 151, 505, 512 |
| MflI | RGATCY | 2 cut(s) | 272, 548 |
| MluCI | AATT | 4 cut(s) | 59, 575, 605, 647 |
| MmeI | TCCRAC | 1 cut(s) | 282 |
| MnlI | CCTC | 5 cut(s) | 40, 89, 265, 322, 457 |
| MseI | TTAA | 1 cut(s) | 57 |
| MslI | CAYNNNNRTG | 1 cut(s) | 47 |
| MspI | CCGG | 1 cut(s) | 388 |
| Mva1269I | GAATGC | 1 cut(s) | 423 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 78, 483, 489, 579 |
| NdeII | GATC | 4 cut(s) | 16, 229, 272, 548 |
| NlaIII | CATG | 2 cut(s) | 432, 439 |
| NsbI | TGCGCA | 1 cut(s) | 422 |
| NspV | TTCGAA | 2 cut(s) | 168, 182 |
| PaeR7I | CTCGAG | 1 cut(s) | 26 |
| PagI | TCATGA | 1 cut(s) | 435 |
| PctI | GAATGC | 1 cut(s) | 423 |
| PkrI | GCNGC | 3 cut(s) | 193, 485, 558 |
| PsuI | RGATCY | 2 cut(s) | 272, 548 |
| RsaI | GTAC | 2 cut(s) | 457, 625 |
| RsaNI | GTAC | 2 cut(s) | 456, 624 |
| RseI | CAYNNNNRTG | 1 cut(s) | 47 |
| SaqAI | TTAA | 1 cut(s) | 57 |
| SatI | GCNGC | 3 cut(s) | 192, 484, 557 |
| Sau3AI | GATC | 4 cut(s) | 16, 229, 272, 548 |
| SfaNI | GCATC | 3 cut(s) | 135, 400, 575 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| Sfr274I | CTCGAG | 1 cut(s) | 26 |
| SfuI | TTCGAA | 2 cut(s) | 168, 182 |
| SlaI | CTCGAG | 1 cut(s) | 26 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 47 |
| SmlI | CTYRAG | 1 cut(s) | 26 |
| SmoI | CTYRAG | 1 cut(s) | 26 |
| Sse9I | AATT | 4 cut(s) | 59, 575, 605, 647 |
| SsiI | CCGC | 2 cut(s) | 360, 582 |
| SspI | AATATT | 1 cut(s) | 173 |
| SspMI | CTAG | 1 cut(s) | 195 |
| TaqI | TCGA | 4 cut(s) | 27, 168, 182, 263 |
| TasI | AATT | 4 cut(s) | 59, 575, 605, 647 |
| TatI | WGTACW | 1 cut(s) | 455 |
| Tru1I | TTAA | 1 cut(s) | 57 |
| Tru9I | TTAA | 1 cut(s) | 57 |
| TscAI | CASTG | 3 cut(s) | 297, 575, 634 |
| TseI | GCWGC | 3 cut(s) | 191, 483, 556 |
| TspDTI | ATGAA | 2 cut(s) | 17, 73 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| TspRI | CASTG | 3 cut(s) | 297, 575, 634 |
| XapI | RAATTY | 3 cut(s) | 59, 575, 647 |
| XhoI | CTCGAG | 1 cut(s) | 26 |
| XspI | CTAG | 1 cut(s) | 195 |