60S ribosomal Protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G32670 |
| fragaria_vesca | FvH4_3g05760 |
| malus_domestica | MD09G1149400.v1.1 MD17G1135800.v1.1 |
| pyrus_communis | pycom09g06870 pycom17g12950 |
| rosa_chinensis | RchiOBHm_Chr1g0331531 RchiOBHm_Chr1g0354441 RchiOBHm_Chr4g0408671 RchiOBHm_Chr5g0013781 RchiOBHm_Chr5g0040271 RchiOBHm_Chr5g0077631 RchiOBHm_Chr6g0245431 |
| rosa_laevigata | RLG00000027688 RLG00000032046 |
| rosa_multiflora | Rmu_co8334583.1_g000001 Rmu_sc0002736.1_g000001 Rmu_sc0004645.1_g000004 Rmu_ssc0000256.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00062860 Rroxscaffold_4G00303150 Rroxscaffold_7G00189450 |
| rosa_rugosa | Rorug02G0509500 Rorug04G0140600 Rorug04G0140600 Rorug05G0012800 |
| rosa_samantha | Rh4CG158800 Rh4CG275900 Rh5CG115100 Rh5DG101900 Rh6CG232200 |
| rosa_wichuraiana | Rw7G030000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 26 |
| AcoI | YGGCCR | 1 cut(s) | 84 |
| AcsI | RAATTY | 1 cut(s) | 135 |
| AdeI | CACNNNGTG | 1 cut(s) | 253 |
| AfaI | GTAC | 4 cut(s) | 35, 179, 188, 227 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 387 |
| AflIII | ACRYGT | 1 cut(s) | 174 |
| AgsI | TTSAA | 2 cut(s) | 52, 218 |
| AjnI | CCWGG | 2 cut(s) | 386, 416 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 7, 39, 335, 367 |
| AluBI | AGCT | 2 cut(s) | 287, 394 |
| AluI | AGCT | 2 cut(s) | 287, 394 |
| Alw21I | GWGCWC | 1 cut(s) | 323 |
| Alw26I | GTCTC | 1 cut(s) | 186 |
| AoxI | GGCC | 3 cut(s) | 84, 377, 419 |
| ApoI | RAATTY | 1 cut(s) | 135 |
| AspS9I | GGNCC | 3 cut(s) | 6, 378, 420 |
| AsuHPI | GGTGA | 1 cut(s) | 265 |
| AvaII | GGWCC | 1 cut(s) | 6 |
| BalI | TGGCCA | 1 cut(s) | 86 |
| Bbv12I | GWGCWC | 1 cut(s) | 323 |
| BccI | CCATC | 4 cut(s) | 95, 128, 299, 391 |
| BciT130I | CCWGG | 2 cut(s) | 388, 418 |
| BcoDI | GTCTC | 1 cut(s) | 186 |
| Bme1390I | CCNGG | 2 cut(s) | 388, 418 |
| Bme18I | GGWCC | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 3 cut(s) | 6, 378, 420 |
| BmiI | GGNNCC | 1 cut(s) | 380 |
| BmrFI | CCNGG | 2 cut(s) | 388, 418 |
| BmsI | GCATC | 3 cut(s) | 248, 276, 422 |
| BpuEI | CTTGAG | 2 cut(s) | 61, 380 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 387 |
| Bse1I | ACTGG | 1 cut(s) | 166 |
| Bse3DI | GCAATG | 1 cut(s) | 76 |
| BseBI | CCWGG | 2 cut(s) | 388, 418 |
| BseGI | GGATG | 4 cut(s) | 267, 291, 383, 413 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 387 |
| BseMI | GCAATG | 1 cut(s) | 76 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseNI | ACTGG | 1 cut(s) | 166 |
| BseYI | CCCAGC | 1 cut(s) | 295 |
| BshFI | GGCC | 3 cut(s) | 86, 379, 421 |
| BsiHKAI | GWGCWC | 1 cut(s) | 323 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 387 |
| BsmAI | GTCTC | 1 cut(s) | 186 |
| BsnI | GGCC | 3 cut(s) | 86, 379, 421 |
| Bsp1286I | GDGCHC | 1 cut(s) | 323 |
| Bsp1407I | TGTACA | 2 cut(s) | 177, 225 |
| Bsp143I | GATC | 1 cut(s) | 345 |
| BspANI | GGCC | 3 cut(s) | 86, 379, 421 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspLI | GGNNCC | 1 cut(s) | 380 |
| BsrDI | GCAATG | 1 cut(s) | 76 |
| BsrGI | TGTACA | 2 cut(s) | 177, 225 |
| BsrI | ACTGG | 1 cut(s) | 166 |
| BssMI | GATC | 1 cut(s) | 345 |
| Bst2UI | CCWGG | 2 cut(s) | 388, 418 |
| Bst4CI | ACNGT | 1 cut(s) | 306 |
| BstAUI | TGTACA | 2 cut(s) | 177, 225 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstF5I | GGATG | 4 cut(s) | 267, 291, 383, 413 |
| BstKTI | GATC | 1 cut(s) | 348 |
| BstMAI | GTCTC | 1 cut(s) | 186 |
| BstMBI | GATC | 1 cut(s) | 345 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 218 |
| BstNI | CCWGG | 2 cut(s) | 388, 418 |
| BstNSI | RCATGY | 1 cut(s) | 178 |
| BstSCI | CCNGG | 2 cut(s) | 386, 416 |
| BsuRI | GGCC | 3 cut(s) | 86, 379, 421 |
| BtsCI | GGATG | 4 cut(s) | 267, 291, 383, 413 |
| BtsIMutI | CAGTG | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 3 cut(s) | 6, 378, 420 |
| Csp6I | GTAC | 4 cut(s) | 34, 178, 187, 226 |
| CviAII | CATG | 2 cut(s) | 175, 223 |
| CviJI | RGCY | 8 cut(s) | 86, 142, 156, 221, 287, 379, 394, 421 |
| CviKI_1 | RGCY | 8 cut(s) | 86, 142, 156, 221, 287, 379, 394, 421 |
| CviQI | GTAC | 4 cut(s) | 34, 178, 187, 226 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 1 cut(s) | 347 |
| DpnII | GATC | 1 cut(s) | 345 |
| DraIII | CACNNNGTG | 1 cut(s) | 253 |
| EaeI | YGGCCR | 1 cut(s) | 84 |
| Eco32I | GATATC | 1 cut(s) | 149 |
| Eco47I | GGWCC | 1 cut(s) | 6 |
| EcoO109I | RGGNCCY | 1 cut(s) | 378 |
| EcoRII | CCWGG | 2 cut(s) | 386, 416 |
| EcoRV | GATATC | 1 cut(s) | 149 |
| FaeI | CATG | 2 cut(s) | 178, 226 |
| FaiI | YATR | 6 cut(s) | 132, 176, 224, 336, 406, 434 |
| FatI | CATG | 2 cut(s) | 174, 222 |
| FokI | GGATG | 4 cut(s) | 254, 278, 370, 400 |
| GsaI | CCCAGC | 1 cut(s) | 299 |
| HaeIII | GGCC | 3 cut(s) | 86, 379, 421 |
| Hin1II | CATG | 2 cut(s) | 178, 226 |
| HphI | GGTGA | 1 cut(s) | 265 |
| Hpy166II | GTNNAC | 1 cut(s) | 228 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy188III | TCNNGA | 5 cut(s) | 40, 124, 280, 367, 397 |
| Hpy8I | GTNNAC | 1 cut(s) | 228 |
| HpyAV | CCTTC | 1 cut(s) | 364 |
| HpyCH4III | ACNGT | 1 cut(s) | 306 |
| HpyCH4V | TGCA | 2 cut(s) | 267, 309 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 218 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| Hsp92II | CATG | 2 cut(s) | 178, 226 |
| Kzo9I | GATC | 1 cut(s) | 345 |
| LpnPI | CCDG | 9 cut(s) | 12, 147, 235, 309, 352, 373, 400, 403, 430 |
| LweI | GCATC | 3 cut(s) | 248, 276, 422 |
| MaeIII | GTNAC | 1 cut(s) | 245 |
| MalI | GATC | 1 cut(s) | 347 |
| MboI | GATC | 1 cut(s) | 345 |
| MboII | GAAGA | 2 cut(s) | 64, 73 |
| MhlI | GDGCHC | 1 cut(s) | 323 |
| MlsI | TGGCCA | 1 cut(s) | 86 |
| MluCI | AATT | 1 cut(s) | 135 |
| MluNI | TGGCCA | 1 cut(s) | 86 |
| MmeI | TCCRAC | 1 cut(s) | 137 |
| MnlI | CCTC | 4 cut(s) | 36, 249, 306, 437 |
| Mox20I | TGGCCA | 1 cut(s) | 86 |
| MscI | TGGCCA | 1 cut(s) | 86 |
| Msp20I | TGGCCA | 1 cut(s) | 86 |
| MspR9I | CCNGG | 2 cut(s) | 388, 418 |
| MvaI | CCWGG | 2 cut(s) | 388, 418 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 218 |
| NdeII | GATC | 1 cut(s) | 345 |
| NlaIII | CATG | 2 cut(s) | 178, 226 |
| NlaIV | GGNNCC | 1 cut(s) | 380 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| NspI | RCATGY | 1 cut(s) | 178 |
| PciI | ACATGT | 1 cut(s) | 174 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 26 |
| PfoI | TCCNGGA | 1 cut(s) | 386 |
| PscI | ACATGT | 1 cut(s) | 174 |
| Psp6I | CCWGG | 2 cut(s) | 386, 416 |
| PspFI | CCCAGC | 1 cut(s) | 295 |
| PspGI | CCWGG | 2 cut(s) | 386, 416 |
| PspN4I | GGNNCC | 1 cut(s) | 380 |
| PspPI | GGNCC | 3 cut(s) | 6, 378, 420 |
| RsaI | GTAC | 4 cut(s) | 35, 179, 188, 227 |
| RsaNI | GTAC | 4 cut(s) | 34, 178, 187, 226 |
| Sau3AI | GATC | 1 cut(s) | 345 |
| Sau96I | GGNCC | 3 cut(s) | 6, 378, 420 |
| ScrFI | CCNGG | 2 cut(s) | 388, 418 |
| SduI | GDGCHC | 1 cut(s) | 323 |
| SetI | ASST | 6 cut(s) | 8, 260, 289, 375, 396, 429 |
| SfaNI | GCATC | 3 cut(s) | 248, 276, 422 |
| SinI | GGWCC | 1 cut(s) | 6 |
| SmlI | CTYRAG | 2 cut(s) | 40, 395 |
| SmoI | CTYRAG | 2 cut(s) | 40, 395 |
| Sse9I | AATT | 1 cut(s) | 135 |
| StyD4I | CCNGG | 2 cut(s) | 386, 416 |
| TaaI | ACNGT | 1 cut(s) | 306 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 1 cut(s) | 135 |
| TatI | WGTACW | 3 cut(s) | 33, 177, 225 |
| TscAI | CASTG | 1 cut(s) | 235 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| TspRI | CASTG | 1 cut(s) | 235 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 26 |
| VpaK11BI | GGWCC | 1 cut(s) | 6 |
| XapI | RAATTY | 1 cut(s) | 135 |
| XceI | RCATGY | 1 cut(s) | 178 |