pycom11g00210

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0001378
Physical Location & Seq
Reverse (-)
184606 .. 188195
3590 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2010 bp
ATGGCGACCACCGTTTCCCCACCTGCGGATCAAGCTGCAGACTTGCTGAAGAATTTGGCCTTGGAATCTCAGACCCAGGGTCCTGATGATATCCCTGACCCTGCCACTGCCAGGAAGCCCGTTGACGTGACTTCTAAGAGCAAGTCTTATGATCGGTCTACGGCCCCATTGCGAAAGAATTTTATGGATCCATCTGCGTGCTATCTACCTAATGGTTACACATCTTCTGCCTATTACTATGGAGAAACTCTTTTATATCCTGCCATCATATCATATAATGCTTGTTGCATATTTCAGGCTGTCTATGGGGATAATGGTTCTTTTATGTATCATCATGGTTATGGTTATGCACCCTACAGCACATATTCAACATCGGGGTCTCCGGTTTCAACTGTGGGAAGTGATGGTCAGCTATATGGACCTCAGCAGTACCAATATCCTCCCTATTTTAAGCAGCTGAAACCTAACAGTGGCTCACACACCCCTAATTCAGCTGTTCCTTCCCAGGGGGCTGTCTCTACCGCAAAGGATGCTGGCCACAAGCCCTCACTTGTAGGAACAGCTAATGGGAATCCCGTTGGTGTTCTGGCCAGTGTGTGTAAGAAGGGAAATAGTCCTTCCGATTTCTCAAAACCACCATATAAAAACCCATCACTGAATCTAAGGGGTTCCTGCAATGGGTACTATGATGCAATGTGTGGTTTTGATGGGTTGGTAACTCCTACCCCATGGATTGAACGGCCAATGTATTCAAATGGACTGGGTAAACCAATGACTGGAAACGCAGTCAACAGAACTCCATCTTCCAAGAATCAGACTTCCCGATCAAACTCTCAATTCATGGATTTGTACCACACGAGGATGGGATACGGTATGGATACAGCTAACGGACTTGTGAATGGGATGTATGCCAATGAATTGTATGGTCATTATTGGAACCCAATTAGACTCGGTATGGGATTTGGATCCAATGGTTTTGGTATACATAGAAATGGAAGTGGGTGGACAGCTCTTCAAAACAAGTATAAAACCAGGGGGCGAGACAGTTCCTTCCGCTTTGGTAACCAAGACATAGAAGGCTTGGATGAGTTGAACAAGGGACCTAGAGTTAAAAGTTTAAAAAATCAAAAGGGAAATTCACCTGTTGCTGTAGCAGTTAAGGGGAACAATATGCTGTTGAATAAAGTTGACGACGAGAAGGATGCAGCTAGCATAATGGCAGAGCAGGAGCAGTACATCGGAACAGATATCTGTAATCATTATGCTGATGCTAAGTTCTTCATTATTAAGTCATATAGTGAGGATGATGTTCATAAGAGTGTAAAGTATAATGTTTGGGCCAGCACACCAAATGGAAACAATAAACTTCATGCAGCATACCAAGAGGCTCAGGGGGAGTCAGGTGGCTGCCCCGTGTTTCTGTTTTTCTCGGTGAATGCCAGTGGCCAATTTGTTGGCCTAGCGGAGATGGTGGGGCCGGTAGATTTTAACAAGAATGTGGAACATTGGCAACAAGACAAGTGGACTGGCTATTTTCCAGTTAAGTGGCACATTGTAAAGGATGTACCCAACAGTTTGCTAAAGCACATTACCCTAGAGAACAATGAAAACAAACCTGTCACTAACAGCAGGGACACTCAAGAGGTCAAGCCAGAGCAGGGGCTTAAAATGATCAAGATGTTCAAGGATCATTCCAGTAAAACAAGCCTTTTGGATGATTTTGAGTTCTATGAAGCTCGCCAGAAGACAATTCAGGAAAATAAAGCAAAACAGCAGATCCGGAAACAGGTATTGGATGGGAAGCCAAGTGATGGAAGAAATAATGGGGCAAATGAGGCGCTCAAATCCTTGGATTCATTTGGAACTAACTTAGATTTGATTAAGGAACCGACACCAAGTGCTGAGACCAGTGAGGAACTGAAGTTGTCGGAGAATGGATCGGTTGCTGAAACAGGAGGAAATCTGAAGGCTCCAGAACTAGCTGTGACCGAGATGATTGCAACAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

670

Amino Acids

73.3

Weight (kDa)

7.57

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 424 - 562 2.3e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 31
Acc36I ACCTGC 1 cut(s) 31
AccB7I CCANNNNNTGG 2 cut(s) 776, 1811
AccI GTMKAC 2 cut(s) 158, 982
AccIII TCCGGA 1 cut(s) 1779
AciI CCGC 4 cut(s) 26, 522, 1054, 1463
AclWI GGATC 8 cut(s) 36, 182, 195, 960, 973, 1695, 1771, 1945
AcoI YGGCCR 4 cut(s) 535, 588, 740, 1444
AcsI RAATTY 3 cut(s) 52, 178, 1135
AcuI CTGAAG 3 cut(s) 68, 1940, 1985
AdeI CACNNNGTG 1 cut(s) 1898
AfaI GTAC 5 cut(s) 431, 683, 851, 1235, 1566
AfiI CCNNNNNNNGG 9 cut(s) 25, 111, 470, 506, 678, 776, 1658, 1786, 1811
AgsI TTSAA 8 cut(s) 369, 390, 737, 753, 1016, 1093, 1180, 1684
AhdI GACNNNNNGTC 1 cut(s) 78
AjiI CACGTC 1 cut(s) 127
AjnI CCWGG 4 cut(s) 75, 110, 504, 1031
AjuI GAANNNNNNNTTGG 4 cut(s) 44, 76, 1775, 1807
Alw26I GTCTC 4 cut(s) 384, 520, 1035, 1898
AlwI GGATC 8 cut(s) 36, 182, 195, 960, 973, 1695, 1771, 1945
Aor13HI TCCGGA 1 cut(s) 1779
AoxI GGCC 9 cut(s) 57, 162, 535, 588, 740, 1338, 1444, 1456, 1475
ApeKI GCWGC 5 cut(s) 35, 454, 1205, 1373, 1407
ApoI RAATTY 3 cut(s) 52, 178, 1135
AspLEI GCGC 1 cut(s) 1840
AspS9I GGNCC 6 cut(s) 80, 163, 419, 1100, 1338, 1475
AsuHPI GGTGA 2 cut(s) 1131, 1444
AsuNHI GCTAGC 1 cut(s) 1208
AvaII GGWCC 3 cut(s) 80, 419, 1100
BalI TGGCCA 3 cut(s) 537, 590, 1446
BamHI GGATCC 2 cut(s) 187, 965
BauI CACGAG 1 cut(s) 856
BbsI GAAGAC 1 cut(s) 1751
BbvCI CCTCAGC 1 cut(s) 423
BbvI GCAGC 5 cut(s) 22, 466, 1217, 1385, 1394
BceAI ACGGC 2 cut(s) 177, 755
BcgI CGANNNNNNTGC 3 cut(s) 1184, 1218, 1979
BciT130I CCWGG 4 cut(s) 77, 112, 506, 1033
BciVI GTATCC 2 cut(s) 860, 871
BclI TGATCA 1 cut(s) 1671
BcoDI GTCTC 4 cut(s) 384, 520, 1035, 1898
BfaI CTAG 5 cut(s) 1104, 1209, 1460, 1595, 1979
BfmI CTRYAG 3 cut(s) 36, 355, 1149
BfoI RGCGCY 1 cut(s) 1841
BfuAI ACCTGC 1 cut(s) 31
BfuI GTATCC 2 cut(s) 860, 871
BisI GCNGC 5 cut(s) 36, 455, 1206, 1374, 1408
BlsI GCNGC 5 cut(s) 37, 456, 1207, 1375, 1409
Bme1390I CCNGG 4 cut(s) 77, 112, 506, 1033
Bme18I GGWCC 3 cut(s) 80, 419, 1100
BmeRI GACNNNNNGTC 1 cut(s) 78
BmgBI CACGTC 1 cut(s) 127
BmgT120I GGNCC 6 cut(s) 80, 163, 419, 1100, 1338, 1475
BmrFI CCNGG 4 cut(s) 77, 112, 506, 1033
BmrI ACTGGG 1 cut(s) 770
BmsI GCATC 4 cut(s) 520, 679, 1192, 1258
BmtI GCTAGC 1 cut(s) 1212
BmuI ACTGGG 1 cut(s) 770
BpiI GAAGAC 1 cut(s) 1751
BpmI CTGGAG 1 cut(s) 1956
Bpu10I CCTNAGC 2 cut(s) 423, 1389
BpuEI CTTGAG 1 cut(s) 1623
BsaBI GATNNNNATC 1 cut(s) 964
BsaI GGTCTC 2 cut(s) 384, 1898
BsaJI CCNNGG 8 cut(s) 60, 75, 76, 504, 505, 728, 1032, 1848
BsaWI WCCGGW 2 cut(s) 382, 1779
Bsc4I CCNNNNNNNGG 9 cut(s) 25, 111, 470, 506, 678, 776, 1658, 1786, 1811
Bse118I RCCGGY 1 cut(s) 1477
Bse1I ACTGG 8 cut(s) 591, 765, 781, 1440, 1531, 1538, 1695, 1908
Bse3DI GCAATG 3 cut(s) 167, 682, 699
Bse8I GATNNNNATC 1 cut(s) 964
BseAI TCCGGA 1 cut(s) 1779
BseBI CCWGG 4 cut(s) 77, 112, 506, 1033
BseDI CCNNGG 8 cut(s) 60, 75, 76, 504, 505, 728, 1032, 1848
BseGI GGATG 9 cut(s) 535, 867, 909, 1090, 1207, 1309, 1567, 1720, 1801
BseJI GATNNNNATC 1 cut(s) 964
BseLI CCNNNNNNNGG 9 cut(s) 25, 111, 470, 506, 678, 776, 1658, 1786, 1811
BseMI GCAATG 3 cut(s) 167, 682, 699
BseMII CTCAG 4 cut(s) 83, 437, 1403, 1893
BseNI ACTGG 8 cut(s) 591, 765, 781, 1440, 1531, 1538, 1695, 1908
BseXI GCAGC 5 cut(s) 22, 466, 1217, 1385, 1394
BshFI GGCC 9 cut(s) 59, 164, 537, 590, 742, 1340, 1446, 1458, 1477
BsiSI CCGG 3 cut(s) 383, 1478, 1780
BslFI GGGAC 2 cut(s) 1113, 1646
BslI CCNNNNNNNGG 9 cut(s) 25, 111, 470, 506, 678, 776, 1658, 1786, 1811
BsmAI GTCTC 4 cut(s) 384, 520, 1035, 1898
BsmFI GGGAC 2 cut(s) 1113, 1646
BsmI GAATGC 1 cut(s) 1441
BsnI GGCC 9 cut(s) 59, 164, 537, 590, 742, 1340, 1446, 1458, 1477
Bso31I GGTCTC 2 cut(s) 384, 1898
Bsp13I TCCGGA 1 cut(s) 1779
Bsp143I GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
Bsp19I CCATGG 1 cut(s) 728
BspACI CCGC 4 cut(s) 26, 522, 1054, 1463
BspANI GGCC 9 cut(s) 59, 164, 537, 590, 742, 1340, 1446, 1458, 1477
BspCNI CTCAG 4 cut(s) 82, 436, 1402, 1894
BspEI TCCGGA 1 cut(s) 1779
BspMAI CTGCAG 1 cut(s) 40
BspMI ACCTGC 1 cut(s) 31
BspOI GCTAGC 1 cut(s) 1212
BspPI GGATC 8 cut(s) 36, 182, 195, 960, 973, 1695, 1771, 1945
BspQI GCTCTTC 1 cut(s) 1017
BspTNI GGTCTC 2 cut(s) 384, 1898
BsrDI GCAATG 3 cut(s) 167, 682, 699
BsrFI RCCGGY 1 cut(s) 1477
BsrI ACTGG 8 cut(s) 591, 765, 781, 1440, 1531, 1538, 1695, 1908
BssAI RCCGGY 1 cut(s) 1477
BssECI CCNNGG 8 cut(s) 60, 75, 76, 504, 505, 728, 1032, 1848
BssMI GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
BssNAI GTATAC 1 cut(s) 983
BssSI CACGAG 1 cut(s) 856
BssT1I CCWWGG 3 cut(s) 60, 728, 1848
Bst1107I GTATAC 1 cut(s) 983
Bst2BI CACGAG 1 cut(s) 856
Bst2UI CCWGG 4 cut(s) 77, 112, 506, 1033
Bst4CI ACNGT 6 cut(s) 13, 394, 470, 872, 1046, 1574
Bst6I CTCTTC 1 cut(s) 1017
BstAPI GCANNNNNTGC 1 cut(s) 530
BstC8I GCNNGC 5 cut(s) 199, 535, 1210, 1342, 1738
BstDEI CTNAG 8 cut(s) 69, 135, 423, 662, 1272, 1389, 1870, 1902
BstDSI CCRYGG 1 cut(s) 728
BstEII GGTNACC 1 cut(s) 1061
BstF5I GGATG 9 cut(s) 535, 867, 909, 1090, 1207, 1309, 1567, 1720, 1801
BstH2I RGCGCY 1 cut(s) 1841
BstHHI GCGC 1 cut(s) 1840
BstKTI GATC 9 cut(s) 31, 154, 190, 827, 968, 1674, 1690, 1779, 1940
BstMAI GTCTC 4 cut(s) 384, 520, 1035, 1898
BstMBI GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
BstMWI GCNNNNNNNGC 3 cut(s) 32, 530, 1835
BstNI CCWGG 4 cut(s) 77, 112, 506, 1033
BstPI GGTNACC 1 cut(s) 1061
BstSCI CCNGG 4 cut(s) 75, 110, 504, 1031
BstSFI CTRYAG 3 cut(s) 36, 355, 1149
BstV1I GCAGC 5 cut(s) 22, 466, 1217, 1385, 1394
BstV2I GAAGAC 1 cut(s) 1751
BstX2I RGATCY 3 cut(s) 187, 965, 1776
BstXI CCANNNNNNTGG 2 cut(s) 1454, 1545
BstYI RGATCY 3 cut(s) 187, 965, 1776
BstZ17I GTATAC 1 cut(s) 983
BsuI GTATCC 2 cut(s) 860, 871
BsuRI GGCC 9 cut(s) 59, 164, 537, 590, 742, 1340, 1446, 1458, 1477
BtgI CCRYGG 1 cut(s) 728
BtrI CACGTC 1 cut(s) 127
BtsCI GGATG 9 cut(s) 535, 867, 909, 1090, 1207, 1309, 1567, 1720, 1801
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 6 cut(s) 105, 475, 598, 653, 1447, 1915
BveI ACCTGC 1 cut(s) 31
Cac8I GCNNGC 5 cut(s) 199, 535, 1210, 1342, 1738
CfoI GCGC 1 cut(s) 1840
Cfr10I RCCGGY 1 cut(s) 1477
Cfr13I GGNCC 6 cut(s) 80, 163, 419, 1100, 1338, 1475
Csp6I GTAC 5 cut(s) 430, 682, 850, 1234, 1565
CspCI CAANNNNNGTGG 2 cut(s) 1502, 1537
CviAII CATG 4 cut(s) 335, 729, 841, 1370
CviQI GTAC 5 cut(s) 430, 682, 850, 1234, 1565
DdeI CTNAG 8 cut(s) 69, 135, 423, 662, 1272, 1389, 1870, 1902
DpnI GATC 9 cut(s) 30, 153, 189, 826, 967, 1673, 1689, 1778, 1939
DpnII GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
DraI TTTAAA 1 cut(s) 1119
DraIII CACNNNGTG 1 cut(s) 1898
DriI GACNNNNNGTC 1 cut(s) 78
EaeI YGGCCR 4 cut(s) 535, 588, 740, 1444
Eam1104I CTCTTC 1 cut(s) 1017
Eam1105I GACNNNNNGTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 1017
Eco130I CCWWGG 3 cut(s) 60, 728, 1848
Eco31I GGTCTC 2 cut(s) 384, 1898
Eco32I GATATC 2 cut(s) 91, 1249
Eco47I GGWCC 3 cut(s) 80, 419, 1100
Eco57I CTGAAG 3 cut(s) 68, 1940, 1985
Eco91I GGTNACC 1 cut(s) 1061
EcoO109I RGGNCCY 2 cut(s) 80, 1100
EcoO65I GGTNACC 1 cut(s) 1061
EcoRII CCWGG 4 cut(s) 75, 110, 504, 1031
EcoRV GATATC 2 cut(s) 91, 1249
EcoT14I CCWWGG 3 cut(s) 60, 728, 1848
ErhI CCWWGG 3 cut(s) 60, 728, 1848
FaeI CATG 4 cut(s) 338, 732, 844, 1373
FaqI GGGAC 2 cut(s) 1113, 1646
FatI CATG 4 cut(s) 334, 728, 840, 1369
FbaI TGATCA 1 cut(s) 1671
FblI GTMKAC 2 cut(s) 158, 982
Fnu4HI GCNGC 5 cut(s) 36, 455, 1206, 1374, 1408
FokI GGATG 9 cut(s) 542, 874, 916, 1097, 1214, 1316, 1574, 1727, 1808
Fsp4HI GCNGC 5 cut(s) 36, 455, 1206, 1374, 1408
FspBI CTAG 5 cut(s) 1104, 1209, 1460, 1595, 1979
GlaI GCGC 1 cut(s) 1839
GluI GCNGC 5 cut(s) 36, 455, 1206, 1374, 1408
GsuI CTGGAG 1 cut(s) 1956
HaeII RGCGCY 1 cut(s) 1841
HaeIII GGCC 9 cut(s) 59, 164, 537, 590, 742, 1340, 1446, 1458, 1477
HapII CCGG 3 cut(s) 383, 1478, 1780
HhaI GCGC 1 cut(s) 1840
Hin1II CATG 4 cut(s) 338, 732, 844, 1373
Hin6I GCGC 1 cut(s) 1838
HinP1I GCGC 1 cut(s) 1838
HincII GTYRAC 3 cut(s) 124, 790, 1189
HindII GTYRAC 3 cut(s) 124, 790, 1189
HinfI GANTC 7 cut(s) 65, 571, 658, 811, 948, 1397, 1853
HpaII CCGG 3 cut(s) 383, 1478, 1780
HphI GGTGA 2 cut(s) 1131, 1444
Hpy166II GTNNAC 8 cut(s) 124, 159, 767, 790, 983, 1005, 1189, 1524
Hpy188I TCNGA 6 cut(s) 72, 622, 816, 1241, 1930, 1965
Hpy188III TCNNGA 7 cut(s) 83, 822, 1640, 1675, 1754, 1780, 1973
Hpy8I GTNNAC 8 cut(s) 124, 159, 767, 790, 983, 1005, 1189, 1524
Hpy99I CGWCG 1 cut(s) 1196
HpyAV CCTTC 7 cut(s) 510, 598, 627, 1060, 1070, 1192, 1960
HpyCH4III ACNGT 6 cut(s) 13, 394, 470, 872, 1046, 1574
HpyCH4IV ACGT 1 cut(s) 126
HpyCH4V TGCA 8 cut(s) 38, 288, 350, 675, 692, 1205, 1373, 2000
HpyF10VI GCNNNNNNNGC 3 cut(s) 32, 530, 1835
HpyF3I CTNAG 8 cut(s) 69, 135, 423, 662, 1272, 1389, 1870, 1902
HpySE526I ACGT 1 cut(s) 126
Hsp92II CATG 4 cut(s) 338, 732, 844, 1373
HspAI GCGC 1 cut(s) 1838
Kpn2I TCCGGA 1 cut(s) 1779
Ksp22I TGATCA 1 cut(s) 1671
Kzo9I GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
LguI GCTCTTC 1 cut(s) 1017
LmnI GCTCC 2 cut(s) 1228, 1975
Lsp1109I GCAGC 5 cut(s) 22, 466, 1217, 1385, 1394
LweI GCATC 4 cut(s) 520, 679, 1192, 1258
MaeI CTAG 5 cut(s) 1104, 1209, 1460, 1595, 1979
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 6 cut(s) 127, 215, 715, 1061, 1618, 1984
MalI GATC 9 cut(s) 30, 153, 189, 826, 967, 1673, 1689, 1778, 1939
MboI GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
MboII GAAGA 7 cut(s) 61, 216, 795, 1004, 1270, 1756, 1827
MflI RGATCY 3 cut(s) 187, 965, 1776
MlsI TGGCCA 3 cut(s) 537, 590, 1446
MluCI AATT 9 cut(s) 52, 178, 487, 836, 917, 942, 1135, 1448, 1749
MluNI TGGCCA 3 cut(s) 537, 590, 1446
MlyI GAGTC 2 cut(s) 942, 1406
MmeI TCCRAC 1 cut(s) 1908
Mox20I TGGCCA 3 cut(s) 537, 590, 1446
MroI TCCGGA 1 cut(s) 1779
MscI TGGCCA 3 cut(s) 537, 590, 1446
MseI TTAA 9 cut(s) 450, 1110, 1118, 1158, 1287, 1488, 1542, 1665, 1881
MslI CAYNNNNRTG 5 cut(s) 196, 339, 860, 990, 1317
Msp20I TGGCCA 3 cut(s) 537, 590, 1446
MspA1I CMGCKG 2 cut(s) 457, 494
MspI CCGG 3 cut(s) 383, 1478, 1780
MspR9I CCNGG 4 cut(s) 77, 112, 506, 1033
Mva1269I GAATGC 1 cut(s) 1441
MvaI CCWGG 4 cut(s) 77, 112, 506, 1033
MwoI GCNNNNNNNGC 3 cut(s) 32, 530, 1835
NcoI CCATGG 1 cut(s) 728
NdeII GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
NheI GCTAGC 1 cut(s) 1208
NlaIII CATG 4 cut(s) 338, 732, 844, 1373
NmuCI GTSAC 3 cut(s) 127, 1618, 1984
PaqCI CACCTGC 1 cut(s) 31
PasI CCCWGGG 2 cut(s) 76, 505
PciSI GCTCTTC 1 cut(s) 1017
PctI GAATGC 1 cut(s) 1441
PfeI GAWTC 5 cut(s) 65, 571, 658, 811, 1853
PflMI CCANNNNNTGG 2 cut(s) 776, 1811
PkrI GCNGC 5 cut(s) 37, 456, 1207, 1375, 1409
PleI GAGTC 2 cut(s) 942, 1405
PpsI GAGTC 2 cut(s) 942, 1405
PpuMI RGGWCCY 2 cut(s) 80, 1100
Psp5II RGGWCCY 2 cut(s) 80, 1100
Psp6I CCWGG 4 cut(s) 75, 110, 504, 1031
PspEI GGTNACC 1 cut(s) 1061
PspGI CCWGG 4 cut(s) 75, 110, 504, 1031
PspPI GGNCC 6 cut(s) 80, 163, 419, 1100, 1338, 1475
PspPPI RGGWCCY 2 cut(s) 80, 1100
PstI CTGCAG 1 cut(s) 40
PsuI RGATCY 3 cut(s) 187, 965, 1776
PvuII CAGCTG 2 cut(s) 457, 494
RsaI GTAC 5 cut(s) 431, 683, 851, 1235, 1566
RsaNI GTAC 5 cut(s) 430, 682, 850, 1234, 1565
RseI CAYNNNNRTG 5 cut(s) 196, 339, 860, 990, 1317
SapI GCTCTTC 1 cut(s) 1017
SaqAI TTAA 9 cut(s) 450, 1110, 1118, 1158, 1287, 1488, 1542, 1665, 1881
SatI GCNGC 5 cut(s) 36, 455, 1206, 1374, 1408
Sau3AI GATC 9 cut(s) 28, 151, 187, 824, 965, 1671, 1687, 1776, 1937
Sau96I GGNCC 6 cut(s) 80, 163, 419, 1100, 1338, 1475
SchI GAGTC 2 cut(s) 942, 1406
ScrFI CCNGG 4 cut(s) 77, 112, 506, 1033
SfaNI GCATC 4 cut(s) 520, 679, 1192, 1258
SfcI CTRYAG 3 cut(s) 36, 355, 1149
SinI GGWCC 3 cut(s) 80, 419, 1100
SmiMI CAYNNNNRTG 5 cut(s) 196, 339, 860, 990, 1317
SmlI CTYRAG 1 cut(s) 1638
SmoI CTYRAG 1 cut(s) 1638
Sse9I AATT 9 cut(s) 52, 178, 487, 836, 917, 942, 1135, 1448, 1749
SsiI CCGC 4 cut(s) 26, 522, 1054, 1463
SspMI CTAG 5 cut(s) 1104, 1209, 1460, 1595, 1979
StyD4I CCNGG 4 cut(s) 75, 110, 504, 1031
StyI CCWWGG 3 cut(s) 60, 728, 1848
TaaI ACNGT 6 cut(s) 13, 394, 470, 872, 1046, 1574
TaiI ACGT 1 cut(s) 129
TaqII GACCGA 2 cut(s) 144, 2003
TasI AATT 9 cut(s) 52, 178, 487, 836, 917, 942, 1135, 1448, 1749
TatI WGTACW 1 cut(s) 1233
TfiI GAWTC 5 cut(s) 65, 571, 658, 811, 1853
Tru1I TTAA 9 cut(s) 450, 1110, 1118, 1158, 1287, 1488, 1542, 1665, 1881
Tru9I TTAA 9 cut(s) 450, 1110, 1118, 1158, 1287, 1488, 1542, 1665, 1881
TscAI CASTG 6 cut(s) 112, 475, 598, 660, 1447, 1915
TseFI GTSAC 3 cut(s) 127, 1618, 1984
TseI GCWGC 5 cut(s) 35, 454, 1205, 1373, 1407
Tsp45I GTSAC 3 cut(s) 127, 1618, 1984
TspDTI ATGAA 8 cut(s) 829, 930, 1270, 1301, 1358, 1620, 1746, 1845
TspGWI ACGGA 1 cut(s) 903
TspRI CASTG 6 cut(s) 112, 475, 598, 660, 1447, 1915
Van91I CCANNNNNTGG 2 cut(s) 776, 1811
VpaK11BI GGWCC 3 cut(s) 80, 419, 1100
XapI RAATTY 3 cut(s) 52, 178, 1135
XmiI GTMKAC 2 cut(s) 158, 982
XspI CTAG 5 cut(s) 1104, 1209, 1460, 1595, 1979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.