pycom12g11340

UDP-glycosyltransferase 86A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0002191
Physical Location & Seq
Reverse (-)
13550277 .. 13551812
1536 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1434 bp
ATGGAGGACAAAGCCTCAACCCCTCATGCAATCATGGTGCCTCTTCCTCTCCAAGGCCATGTAACCCCATTGACCCATCTGGCCACGAAGCTTGCTTCACAGGGCTTCACCATCACTTTTGTCAACACCCAATATATTCACCACCACATACTCAAGTCACAACCCAACGACAACACAGAAGACGATATCTTTGCCATGGCGCGTAAATCCGGTCTAGACATACGCTACACAACAGTAAGTGATGGATTTCCACTAGCTTTCGACCGAATTCAGAACCTCGACCAATCTCTTGAGGGTGCTTTGCATGTCTTCCCTGCCCATGTGGATGAACTTGTTGGAAATTTAGTCCAATCTGACCCCTCAATCACTTGTTTGATTGTTGATACTTTCCAATCATGGTCAGCAACCATAGCCAATAAGTACAACCTTATCCATATTTCCTTCTGGACTGAACCAGCTCTAGTGTTCAACATCTACTATCACTTGGACCTTCTCAAAAAAAATGGTCATTTCGGTTCTCATGATAATCGCGAGGACATCATTGATTACATACCTGGCGTGAAAACTATTGAACCAAAGGACTTGATGTCACACCTCCAATCAACAGATTTATTTTGCCCAATGCTCCGAACGTTTTACAAGTCATTTCGCGAAGTGAAAAGGGCAGATTTTATTTTGTGTAATACAGTGCAAGAACTTGAATTTGAGTCCCTTTCTGCCTTGCAAGCTAAGCAACCAACATATGCAATTGGCCCTGTCTTCCCCGATAATCTCACCAAGAATATCGTGGCTACCAACCTGATGCCAGAATTTGACTGCATCCATTGGCTCCACGAGAAGCCTCATGGTTCGGTTTTGTTCATTTCATTTGGAAGCTATGCTCAAGTTACAAAAGATGATTTTGAGGAAATAGCTCATGGGCTTTTGCTTAGTAAAGTGAATTTCATCTGGGTACTTCGTTCCGACGCTACAGGTTATGATGAAACGTATATTCTACCAGTCGGATTTGAAGATGAGATTAAAGATAGAGGGTTGATGGTGCCATGGTGTTCTCAGATTGAGGTGCTTTCACATCCAGCAGTAGGAGGGTTCTTAACGCATTGTGGATGGAATTCTATACTGGAAAGTATGCGGTGTGGTGTTCCCATGCTGTGTTTCCCACTAGTGGCTGACCAAATCACTAATAGGAAACTAGTAGTTGATTATTGGGGCATTGGACTCAATCTTTGTGATCGGGTTAAACCCATTAGAAGGGTGGAGGTAGCAGACAAGATCAACCGTCTGATATGTGGAAAATCGGGTGACGGTTTGCAGAAGAAGACCATGAAAATAACTCAAATATTGGCTGATGCAGTGGCTTTAAACGGGTCATCTCAAAAGAACTTATCTCAATTCATTAGTAATGTGAAGGAAAAAATTCAGACACGAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

478

Amino Acids

53.81

Weight (kDa)

5.94

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 282 - 405 1e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 37, 1039
AccII CGCG 3 cut(s) 202, 531, 651
AciI CCGC 1 cut(s) 1132
AclI AACGTT 1 cut(s) 632
AcoI YGGCCR 1 cut(s) 81
AcsI RAATTY 7 cut(s) 267, 340, 701, 809, 940, 1111, 1416
AfaI GTAC 2 cut(s) 422, 954
AfiI CCNNNNNNNGG 4 cut(s) 53, 1082, 1165, 1251
AgsI TTSAA 4 cut(s) 469, 572, 701, 1010
AhdI GACNNNNNGTC 1 cut(s) 586
AhlI ACTAGT 2 cut(s) 1162, 1192
AjnI CCWGG 1 cut(s) 553
AleI CACNNNNGTG 1 cut(s) 1429
AluBI AGCT 6 cut(s) 91, 257, 458, 728, 876, 914
AluI AGCT 6 cut(s) 91, 257, 458, 728, 876, 914
AoxI GGCC 3 cut(s) 55, 81, 751
ApoI RAATTY 7 cut(s) 267, 340, 701, 809, 940, 1111, 1416
ArsI GACNNNNNNTTYG 4 cut(s) 173, 205, 1209, 1241
Asp700I GAANNNNTTC 1 cut(s) 1416
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 2 cut(s) 487, 752
AsuHPI GGTGA 4 cut(s) 100, 131, 766, 1313
AvaII GGWCC 1 cut(s) 487
BalI TGGCCA 1 cut(s) 83
BanI GGYRCC 2 cut(s) 37, 1039
BauI CACGAG 1 cut(s) 833
BbsI GAAGAC 4 cut(s) 186, 301, 751, 1325
BccI CCATC 5 cut(s) 84, 119, 236, 1030, 1101
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 1 cut(s) 555
BcuI ACTAGT 2 cut(s) 1162, 1192
BfaI CTAG 5 cut(s) 215, 254, 461, 1163, 1193
BfmI CTRYAG 1 cut(s) 969
BlpI GCTNAGC 1 cut(s) 729
Bme1390I CCNGG 1 cut(s) 555
Bme18I GGWCC 1 cut(s) 487
BmeRI GACNNNNNGTC 1 cut(s) 586
BmgT120I GGNCC 2 cut(s) 487, 752
BmiI GGNNCC 3 cut(s) 39, 830, 1041
BmrFI CCNGG 1 cut(s) 555
BmsI GCATC 3 cut(s) 792, 828, 1339
BpiI GAAGAC 4 cut(s) 186, 301, 751, 1325
Bpu1102I GCTNAGC 1 cut(s) 729
BpuEI CTTGAG 3 cut(s) 137, 311, 867
BsaJI CCNNGG 3 cut(s) 52, 195, 1043
BsaWI WCCGGW 1 cut(s) 209
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 1082, 1165, 1251
Bse1I ACTGG 2 cut(s) 998, 1125
BseBI CCWGG 1 cut(s) 555
BseDI CCNNGG 3 cut(s) 52, 195, 1043
BseGI GGATG 4 cut(s) 331, 819, 1072, 1112
BseLI CCNNNNNNNGG 4 cut(s) 53, 1082, 1165, 1251
BseMII CTCAG 1 cut(s) 1067
BseNI ACTGG 2 cut(s) 998, 1125
Bsh1236I CGCG 3 cut(s) 202, 531, 651
Bsh1285I CGRYCG 1 cut(s) 265
BshFI GGCC 3 cut(s) 57, 83, 753
BshNI GGYRCC 2 cut(s) 37, 1039
BsiEI CGRYCG 1 cut(s) 265
BsiSI CCGG 1 cut(s) 210
BslFI GGGAC 1 cut(s) 694
BslI CCNNNNNNNGG 4 cut(s) 53, 1082, 1165, 1251
BsmFI GGGAC 1 cut(s) 694
BsnI GGCC 3 cut(s) 57, 83, 753
Bsp143I GATC 2 cut(s) 1231, 1272
Bsp1720I GCTNAGC 1 cut(s) 729
Bsp19I CCATGG 2 cut(s) 195, 1043
Bsp68I TCGCGA 2 cut(s) 531, 651
BspACI CCGC 1 cut(s) 1132
BspANI GGCC 3 cut(s) 57, 83, 753
BspCNI CTCAG 1 cut(s) 1066
BspFNI CGCG 3 cut(s) 202, 531, 651
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 3 cut(s) 39, 830, 1041
BspT107I GGYRCC 2 cut(s) 37, 1039
BsrI ACTGG 2 cut(s) 998, 1125
BssECI CCNNGG 3 cut(s) 52, 195, 1043
BssMI GATC 2 cut(s) 1231, 1272
BssSI CACGAG 1 cut(s) 833
BssT1I CCWWGG 3 cut(s) 52, 195, 1043
Bst2BI CACGAG 1 cut(s) 833
Bst2UI CCWGG 1 cut(s) 555
Bst4CI ACNGT 4 cut(s) 235, 688, 1280, 1307
Bst6I CTCTTC 1 cut(s) 48
BstC8I GCNNGC 2 cut(s) 93, 726
BstDEI CTNAG 3 cut(s) 729, 929, 1053
BstDSI CCRYGG 2 cut(s) 195, 1043
BstENI CCTNNNNNAGG 1 cut(s) 51
BstF5I GGATG 4 cut(s) 331, 819, 1072, 1112
BstFNI CGCG 3 cut(s) 202, 531, 651
BstHHI GCGC 1 cut(s) 202
BstKTI GATC 2 cut(s) 1234, 1275
BstMBI GATC 2 cut(s) 1231, 1272
BstMCI CGRYCG 1 cut(s) 265
BstMWI GCNNNNNNNGC 3 cut(s) 410, 725, 730
BstNI CCWGG 1 cut(s) 555
BstNSI RCATGY 1 cut(s) 308
BstSCI CCNGG 1 cut(s) 553
BstSFI CTRYAG 1 cut(s) 969
BstUI CGCG 3 cut(s) 202, 531, 651
BstV2I GAAGAC 4 cut(s) 186, 301, 751, 1325
BsuRI GGCC 3 cut(s) 57, 83, 753
BtgI CCRYGG 2 cut(s) 195, 1043
BtsCI GGATG 4 cut(s) 331, 819, 1072, 1112
BtsI GCAGTG 1 cut(s) 1359
BtsIMutI CAGTG 2 cut(s) 693, 1359
BtuMI TCGCGA 2 cut(s) 531, 651
Cac8I GCNNGC 2 cut(s) 93, 726
CciI TCATGA 1 cut(s) 520
CfoI GCGC 1 cut(s) 202
Cfr13I GGNCC 2 cut(s) 487, 752
CseI GACGC 1 cut(s) 974
Csp6I GTAC 2 cut(s) 421, 953
CspCI CAANNNNNGTGG 2 cut(s) 73, 108
CviQI GTAC 2 cut(s) 421, 953
DdeI CTNAG 3 cut(s) 729, 929, 1053
DpnI GATC 2 cut(s) 1233, 1274
DpnII GATC 2 cut(s) 1231, 1272
DraI TTTAAA 1 cut(s) 1362
DriI GACNNNNNGTC 1 cut(s) 586
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 48
Eam1105I GACNNNNNGTC 1 cut(s) 586
EarI CTCTTC 1 cut(s) 48
Eco130I CCWWGG 3 cut(s) 52, 195, 1043
Eco32I GATATC 1 cut(s) 187
Eco47I GGWCC 1 cut(s) 487
EcoNI CCTNNNNNAGG 1 cut(s) 51
EcoRI GAATTC 2 cut(s) 267, 1111
EcoRII CCWGG 1 cut(s) 553
EcoRV GATATC 1 cut(s) 187
EcoT14I CCWWGG 3 cut(s) 52, 195, 1043
ErhI CCWWGG 3 cut(s) 52, 195, 1043
FaqI GGGAC 1 cut(s) 694
FauNDI CATATG 1 cut(s) 742
FokI GGATG 4 cut(s) 338, 806, 1059, 1119
FspBI CTAG 5 cut(s) 215, 254, 461, 1163, 1193
GlaI GCGC 1 cut(s) 201
HaeIII GGCC 3 cut(s) 57, 83, 753
HapII CCGG 1 cut(s) 210
HgaI GACGC 1 cut(s) 974
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 2 cut(s) 707, 1218
HpaII CCGG 1 cut(s) 210
HphI GGTGA 4 cut(s) 100, 131, 766, 1313
Hpy166II GTNNAC 1 cut(s) 124
Hpy188I TCNGA 8 cut(s) 273, 355, 629, 964, 1004, 1056, 1284, 1422
Hpy188III TCNNGA 6 cut(s) 215, 290, 445, 521, 530, 650
Hpy8I GTNNAC 1 cut(s) 124
Hpy99I CGWCG 1 cut(s) 968
HpyAV CCTTC 4 cut(s) 451, 500, 1245, 1402
HpyCH4III ACNGT 4 cut(s) 235, 688, 1280, 1307
HpyCH4IV ACGT 2 cut(s) 632, 986
HpyCH4V TGCA 8 cut(s) 29, 304, 691, 724, 746, 819, 1312, 1352
HpyF10VI GCNNNNNNNGC 3 cut(s) 410, 725, 730
HpyF3I CTNAG 3 cut(s) 729, 929, 1053
HpySE526I ACGT 2 cut(s) 632, 986
HspAI GCGC 1 cut(s) 200
Kzo9I GATC 2 cut(s) 1231, 1272
LmnI GCTCC 2 cut(s) 630, 834
LweI GCATC 3 cut(s) 792, 828, 1339
MaeI CTAG 5 cut(s) 215, 254, 461, 1163, 1193
MaeII ACGT 2 cut(s) 632, 986
MaeIII GTNAC 5 cut(s) 61, 156, 588, 886, 1301
MalI GATC 2 cut(s) 1233, 1274
MboI GATC 2 cut(s) 1231, 1272
MboII GAAGA 7 cut(s) 35, 191, 301, 751, 1022, 1327, 1330
MfeI CAATTG 1 cut(s) 747
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 9 cut(s) 267, 340, 701, 747, 809, 940, 1111, 1391, 1416
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 2 cut(s) 716, 1212
MmeI TCCRAC 3 cut(s) 316, 982, 987
Mox20I TGGCCA 1 cut(s) 83
MroXI GAANNNNTTC 1 cut(s) 1416
MscI TGGCCA 1 cut(s) 83
MseI TTAA 4 cut(s) 1020, 1094, 1239, 1361
MslI CAYNNNNRTG 2 cut(s) 324, 1429
Msp20I TGGCCA 1 cut(s) 83
MspI CCGG 1 cut(s) 210
MspR9I CCNGG 1 cut(s) 555
MunI CAATTG 1 cut(s) 747
MvaI CCWGG 1 cut(s) 555
MvnI CGCG 3 cut(s) 202, 531, 651
MwoI GCNNNNNNNGC 3 cut(s) 410, 725, 730
NcoI CCATGG 2 cut(s) 195, 1043
NdeI CATATG 1 cut(s) 742
NdeII GATC 2 cut(s) 1231, 1272
NlaIV GGNNCC 3 cut(s) 39, 830, 1041
NmuCI GTSAC 3 cut(s) 156, 588, 1301
NruI TCGCGA 2 cut(s) 531, 651
NspI RCATGY 1 cut(s) 308
OliI CACNNNNGTG 1 cut(s) 1429
PagI TCATGA 1 cut(s) 520
PdmI GAANNNNTTC 1 cut(s) 1416
PleI GAGTC 2 cut(s) 715, 1212
PpsI GAGTC 2 cut(s) 715, 1212
Psp1406I AACGTT 1 cut(s) 632
Psp6I CCWGG 1 cut(s) 553
PspGI CCWGG 1 cut(s) 553
PspN4I GGNNCC 3 cut(s) 39, 830, 1041
PspPI GGNCC 2 cut(s) 487, 752
RruI TCGCGA 2 cut(s) 531, 651
RsaI GTAC 2 cut(s) 422, 954
RsaNI GTAC 2 cut(s) 421, 953
RseI CAYNNNNRTG 2 cut(s) 324, 1429
SaqAI TTAA 4 cut(s) 1020, 1094, 1239, 1361
Sau3AI GATC 2 cut(s) 1231, 1272
Sau96I GGNCC 2 cut(s) 487, 752
SchI GAGTC 2 cut(s) 716, 1212
ScrFI CCNGG 1 cut(s) 555
SfaNI GCATC 3 cut(s) 792, 828, 1339
SfcI CTRYAG 1 cut(s) 969
SinI GGWCC 1 cut(s) 487
SmiMI CAYNNNNRTG 2 cut(s) 324, 1429
SmlI CTYRAG 3 cut(s) 152, 290, 882
SmoI CTYRAG 3 cut(s) 152, 290, 882
SpeI ACTAGT 2 cut(s) 1162, 1192
Sse9I AATT 9 cut(s) 267, 340, 701, 747, 809, 940, 1111, 1391, 1416
SsiI CCGC 1 cut(s) 1132
SspI AATATT 1 cut(s) 1341
SspMI CTAG 5 cut(s) 215, 254, 461, 1163, 1193
StyD4I CCNGG 1 cut(s) 553
StyI CCWWGG 3 cut(s) 52, 195, 1043
TaaI ACNGT 4 cut(s) 235, 688, 1280, 1307
TaiI ACGT 2 cut(s) 635, 989
TaqI TCGA 2 cut(s) 261, 279
TaqII GACCGA 1 cut(s) 279
TasI AATT 9 cut(s) 267, 340, 701, 747, 809, 940, 1111, 1391, 1416
TatI WGTACW 1 cut(s) 420
Tru1I TTAA 4 cut(s) 1020, 1094, 1239, 1361
Tru9I TTAA 4 cut(s) 1020, 1094, 1239, 1361
TscAI CASTG 2 cut(s) 693, 1359
TseFI GTSAC 3 cut(s) 156, 588, 1301
Tsp45I GTSAC 3 cut(s) 156, 588, 1301
TspDTI ATGAA 7 cut(s) 342, 850, 855, 934, 996, 1340, 1384
TspRI CASTG 2 cut(s) 693, 1359
VpaK11BI GGWCC 1 cut(s) 487
XagI CCTNNNNNAGG 1 cut(s) 51
XapI RAATTY 7 cut(s) 267, 340, 701, 809, 940, 1111, 1416
XbaI TCTAGA 1 cut(s) 214
XceI RCATGY 1 cut(s) 308
XcmI CCANNNNNNNNNTGG 2 cut(s) 784, 1252
XmnI GAANNNNTTC 1 cut(s) 1416
XspI CTAG 5 cut(s) 215, 254, 461, 1163, 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.