60s ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06820 |
| pyrus_communis | pycom13g16250 |
| rosa_laevigata | RLG00000014744 |
| rosa_multiflora | Rmu_sc0004368.1_g000007 Rmu_sc0020840.1_g000001 Rmu_sc0023010.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074470 Rroxscaffold_1G00074480 Rroxscaffold_3G00245500 Rroxscaffold_4G00314580 |
| rosa_rugosa | Rorug02G0027900 Rorug02G0445200 Rorug04G0184800 Rorug05G0358300 Rorug07G0319700.1 |
| rosa_samantha | Rh1CG051300 Rh1DG131600 Rh2AG545400 Rh2CG479300 Rh4BG413700 Rh4CG274700 Rh6AG173000 Rh6AG233400 Rh6BG302600 Rh6BG438300 Rh7BG350800 |
| rosa_wichuraiana | Rw5G039170 Rw6G020370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 204 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AjnI | CCWGG | 1 cut(s) | 13 |
| ApeKI | GCWGC | 1 cut(s) | 206 |
| BanII | GRGCYC | 1 cut(s) | 66 |
| BbvI | GCAGC | 1 cut(s) | 193 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 224 |
| BciT130I | CCWGG | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 207 |
| BlsI | GCNGC | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 1 cut(s) | 15 |
| BmiI | GGNNCC | 2 cut(s) | 12, 63 |
| BmrFI | CCNGG | 1 cut(s) | 15 |
| BpmI | CTGGAG | 1 cut(s) | 80 |
| BsaJI | CCNNGG | 1 cut(s) | 14 |
| BseBI | CCWGG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 1 cut(s) | 14 |
| BseRI | GAGGAG | 1 cut(s) | 65 |
| BseXI | GCAGC | 1 cut(s) | 193 |
| BsiSI | CCGG | 1 cut(s) | 247 |
| Bsp1286I | GDGCHC | 1 cut(s) | 66 |
| Bsp143I | GATC | 2 cut(s) | 148, 249 |
| BspACI | CCGC | 1 cut(s) | 204 |
| BspLI | GGNNCC | 2 cut(s) | 12, 63 |
| BssECI | CCNNGG | 1 cut(s) | 14 |
| BssMI | GATC | 2 cut(s) | 148, 249 |
| Bst2UI | CCWGG | 1 cut(s) | 15 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 124 |
| BstC8I | GCNNGC | 2 cut(s) | 171, 204 |
| BstKTI | GATC | 2 cut(s) | 151, 252 |
| BstMBI | GATC | 2 cut(s) | 148, 249 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 199 |
| BstNI | CCWGG | 1 cut(s) | 15 |
| BstSCI | CCNGG | 1 cut(s) | 13 |
| BstV1I | GCAGC | 1 cut(s) | 193 |
| BstX2I | RGATCY | 1 cut(s) | 249 |
| BstYI | RGATCY | 1 cut(s) | 249 |
| Cac8I | GCNNGC | 2 cut(s) | 171, 204 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviJI | RGCY | 2 cut(s) | 64, 202 |
| CviKI_1 | RGCY | 2 cut(s) | 64, 202 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DpnI | GATC | 2 cut(s) | 150, 251 |
| DpnII | GATC | 2 cut(s) | 148, 249 |
| Eco24I | GRGCYC | 1 cut(s) | 66 |
| EcoRII | CCWGG | 1 cut(s) | 13 |
| EcoT38I | GRGCYC | 1 cut(s) | 66 |
| FaiI | YATR | 2 cut(s) | 28, 219 |
| FauI | CCCGC | 1 cut(s) | 211 |
| Fnu4HI | GCNGC | 1 cut(s) | 207 |
| FriOI | GRGCYC | 1 cut(s) | 66 |
| Fsp4HI | GCNGC | 1 cut(s) | 207 |
| GluI | GCNGC | 1 cut(s) | 207 |
| GsuI | CTGGAG | 1 cut(s) | 80 |
| HapII | CCGG | 1 cut(s) | 247 |
| HpaII | CCGG | 1 cut(s) | 247 |
| Hpy188I | TCNGA | 1 cut(s) | 254 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 124 |
| HpyCH4V | TGCA | 1 cut(s) | 217 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 199 |
| Kzo9I | GATC | 2 cut(s) | 148, 249 |
| LmnI | GCTCC | 1 cut(s) | 61 |
| LpnPI | CCDG | 6 cut(s) | 27, 44, 87, 119, 155, 221 |
| Lsp1109I | GCAGC | 1 cut(s) | 193 |
| MaeIII | GTNAC | 1 cut(s) | 124 |
| MalI | GATC | 2 cut(s) | 150, 251 |
| MboI | GATC | 2 cut(s) | 148, 249 |
| MboII | GAAGA | 2 cut(s) | 52, 55 |
| MflI | RGATCY | 1 cut(s) | 249 |
| MhlI | GDGCHC | 1 cut(s) | 66 |
| MnlI | CCTC | 2 cut(s) | 83, 86 |
| MspA1I | CMGCKG | 1 cut(s) | 206 |
| MspI | CCGG | 1 cut(s) | 247 |
| MspR9I | CCNGG | 1 cut(s) | 15 |
| MvaI | CCWGG | 1 cut(s) | 15 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 199 |
| NdeII | GATC | 2 cut(s) | 148, 249 |
| NlaIV | GGNNCC | 2 cut(s) | 12, 63 |
| NmuCI | GTSAC | 1 cut(s) | 124 |
| PkrI | GCNGC | 1 cut(s) | 208 |
| Psp6I | CCWGG | 1 cut(s) | 13 |
| PspGI | CCWGG | 1 cut(s) | 13 |
| PspN4I | GGNNCC | 2 cut(s) | 12, 63 |
| PsuI | RGATCY | 1 cut(s) | 249 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| SatI | GCNGC | 1 cut(s) | 207 |
| Sau3AI | GATC | 2 cut(s) | 148, 249 |
| ScrFI | CCNGG | 1 cut(s) | 15 |
| SduI | GDGCHC | 1 cut(s) | 66 |
| SetI | ASST | 1 cut(s) | 75 |
| SsiI | CCGC | 1 cut(s) | 204 |
| StyD4I | CCNGG | 1 cut(s) | 13 |
| TaaI | ACNGT | 2 cut(s) | 10, 124 |
| TatI | WGTACW | 1 cut(s) | 163 |
| TseFI | GTSAC | 1 cut(s) | 124 |
| TseI | GCWGC | 1 cut(s) | 206 |
| Tsp45I | GTSAC | 1 cut(s) | 124 |
| TspDTI | ATGAA | 1 cut(s) | 245 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 136 |