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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06820 |
| pyrus_communis | pycom13g16250 |
| rosa_laevigata | RLG00000014744 |
| rosa_multiflora | Rmu_sc0004368.1_g000007 Rmu_sc0020840.1_g000001 Rmu_sc0023010.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00074470 Rroxscaffold_1G00074480 Rroxscaffold_3G00245500 Rroxscaffold_4G00314580 |
| rosa_rugosa | Rorug02G0027900 Rorug02G0445200 Rorug04G0184800 Rorug05G0358300 Rorug07G0319700.1 |
| rosa_samantha | Rh1CG051300 Rh1DG131600 Rh2AG545400 Rh2CG479300 Rh4BG413700 Rh4CG274700 Rh6AG173000 Rh6AG233400 Rh6BG302600 Rh6BG438300 Rh7BG350800 |
| rosa_wichuraiana | Rw5G039170 Rw6G020370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 21 |
| AclWI | GGATC | 3 cut(s) | 3, 44, 86 |
| AcoI | YGGCCR | 2 cut(s) | 69, 137 |
| AcyI | GRCGYC | 1 cut(s) | 154 |
| AgsI | TTSAA | 1 cut(s) | 164 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 105, 137 |
| Alw26I | GTCTC | 1 cut(s) | 29 |
| AlwI | GGATC | 3 cut(s) | 3, 44, 86 |
| Ama87I | CYCGRG | 1 cut(s) | 54 |
| AoxI | GGCC | 2 cut(s) | 69, 137 |
| AsuC2I | CCSGG | 1 cut(s) | 96 |
| AvaI | CYCGRG | 1 cut(s) | 54 |
| BalI | TGGCCA | 1 cut(s) | 71 |
| BcnI | CCSGG | 1 cut(s) | 96 |
| BcoDI | GTCTC | 1 cut(s) | 29 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 151 |
| BisI | GCNGC | 1 cut(s) | 22 |
| BlsI | GCNGC | 1 cut(s) | 23 |
| Bme1390I | CCNGG | 1 cut(s) | 96 |
| BmeT110I | CYCGRG | 1 cut(s) | 54 |
| BmiI | GGNNCC | 2 cut(s) | 63, 144 |
| BmrFI | CCNGG | 1 cut(s) | 96 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 37, 69 |
| BpuEI | CTTGAG | 1 cut(s) | 64 |
| BpuMI | CCSGG | 1 cut(s) | 96 |
| BsaHI | GRCGYC | 1 cut(s) | 154 |
| BsaJI | CCNNGG | 2 cut(s) | 53, 121 |
| BsaWI | WCCGGW | 1 cut(s) | 11 |
| Bse118I | RCCGGY | 1 cut(s) | 150 |
| BseDI | CCNNGG | 2 cut(s) | 53, 121 |
| BseX3I | CGGCCG | 1 cut(s) | 137 |
| Bsh1285I | CGRYCG | 1 cut(s) | 140 |
| BshFI | GGCC | 2 cut(s) | 71, 139 |
| BsiEI | CGRYCG | 1 cut(s) | 140 |
| BsiHKCI | CYCGRG | 1 cut(s) | 54 |
| BsiSI | CCGG | 4 cut(s) | 12, 95, 140, 151 |
| BsmAI | GTCTC | 1 cut(s) | 29 |
| BsnI | GGCC | 2 cut(s) | 71, 139 |
| BsoBI | CYCGRG | 1 cut(s) | 54 |
| Bsp143I | GATC | 3 cut(s) | 8, 49, 91 |
| BspACI | CCGC | 1 cut(s) | 21 |
| BspANI | GGCC | 2 cut(s) | 71, 139 |
| BspLI | GGNNCC | 2 cut(s) | 63, 144 |
| BspPI | GGATC | 3 cut(s) | 3, 44, 86 |
| BsrFI | RCCGGY | 1 cut(s) | 150 |
| BssAI | RCCGGY | 1 cut(s) | 150 |
| BssECI | CCNNGG | 2 cut(s) | 53, 121 |
| BssMI | GATC | 3 cut(s) | 8, 49, 91 |
| BssNI | GRCGYC | 1 cut(s) | 154 |
| BssT1I | CCWWGG | 1 cut(s) | 121 |
| Bst4CI | ACNGT | 1 cut(s) | 76 |
| BstACI | GRCGYC | 1 cut(s) | 154 |
| BstC8I | GCNNGC | 1 cut(s) | 152 |
| BstDEI | CTNAG | 1 cut(s) | 80 |
| BstKTI | GATC | 3 cut(s) | 11, 52, 94 |
| BstMAI | GTCTC | 1 cut(s) | 29 |
| BstMBI | GATC | 3 cut(s) | 8, 49, 91 |
| BstMCI | CGRYCG | 1 cut(s) | 140 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 151 |
| BstSCI | CCNGG | 1 cut(s) | 94 |
| BstX2I | RGATCY | 2 cut(s) | 8, 49 |
| BstYI | RGATCY | 2 cut(s) | 8, 49 |
| BstZI | CGGCCG | 1 cut(s) | 137 |
| BsuRI | GGCC | 2 cut(s) | 71, 139 |
| Cac8I | GCNNGC | 1 cut(s) | 152 |
| Cfr10I | RCCGGY | 1 cut(s) | 150 |
| CseI | GACGC | 1 cut(s) | 143 |
| CviJI | RGCY | 4 cut(s) | 71, 139, 145, 173 |
| CviKI_1 | RGCY | 4 cut(s) | 71, 139, 145, 173 |
| DdeI | CTNAG | 1 cut(s) | 80 |
| DpnI | GATC | 3 cut(s) | 10, 51, 93 |
| DpnII | GATC | 3 cut(s) | 8, 49, 91 |
| EaeI | YGGCCR | 2 cut(s) | 69, 137 |
| EagI | CGGCCG | 1 cut(s) | 137 |
| EclXI | CGGCCG | 1 cut(s) | 137 |
| Eco130I | CCWWGG | 1 cut(s) | 121 |
| Eco52I | CGGCCG | 1 cut(s) | 137 |
| Eco88I | CYCGRG | 1 cut(s) | 54 |
| EcoT14I | CCWWGG | 1 cut(s) | 121 |
| ErhI | CCWWGG | 1 cut(s) | 121 |
| Fnu4HI | GCNGC | 1 cut(s) | 22 |
| Fsp4HI | GCNGC | 1 cut(s) | 22 |
| GluI | GCNGC | 1 cut(s) | 22 |
| HaeIII | GGCC | 2 cut(s) | 71, 139 |
| HapII | CCGG | 4 cut(s) | 12, 95, 140, 151 |
| HgaI | GACGC | 1 cut(s) | 143 |
| Hin1I | GRCGYC | 1 cut(s) | 154 |
| HpaII | CCGG | 4 cut(s) | 12, 95, 140, 151 |
| Hpy188I | TCNGA | 1 cut(s) | 34 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 107 |
| HpyCH4III | ACNGT | 1 cut(s) | 76 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 151 |
| HpyF3I | CTNAG | 1 cut(s) | 80 |
| Hsp92I | GRCGYC | 1 cut(s) | 154 |
| KroI | GCCGGC | 1 cut(s) | 150 |
| KroNI | GCCGGC | 1 cut(s) | 152 |
| Kzo9I | GATC | 3 cut(s) | 8, 49, 91 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 4 cut(s) | 25, 108, 153, 164 |
| MalI | GATC | 3 cut(s) | 10, 51, 93 |
| MboI | GATC | 3 cut(s) | 8, 49, 91 |
| MboII | GAAGA | 1 cut(s) | 122 |
| MflI | RGATCY | 2 cut(s) | 8, 49 |
| MlsI | TGGCCA | 1 cut(s) | 71 |
| MluNI | TGGCCA | 1 cut(s) | 71 |
| MnlI | CCTC | 3 cut(s) | 11, 52, 63 |
| Mox20I | TGGCCA | 1 cut(s) | 71 |
| MreI | CGCCGGCG | 1 cut(s) | 150 |
| MroNI | GCCGGC | 1 cut(s) | 150 |
| MscI | TGGCCA | 1 cut(s) | 71 |
| Msp20I | TGGCCA | 1 cut(s) | 71 |
| MspI | CCGG | 4 cut(s) | 12, 95, 140, 151 |
| MspR9I | CCNGG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 151 |
| NaeI | GCCGGC | 1 cut(s) | 152 |
| NciI | CCSGG | 1 cut(s) | 96 |
| NdeII | GATC | 3 cut(s) | 8, 49, 91 |
| NgoMIV | GCCGGC | 1 cut(s) | 150 |
| NlaIV | GGNNCC | 2 cut(s) | 63, 144 |
| PdiI | GCCGGC | 1 cut(s) | 152 |
| PfoI | TCCNGGA | 1 cut(s) | 94 |
| PkrI | GCNGC | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 2 cut(s) | 63, 144 |
| PsuI | RGATCY | 2 cut(s) | 8, 49 |
| SatI | GCNGC | 1 cut(s) | 22 |
| Sau3AI | GATC | 3 cut(s) | 8, 49, 91 |
| ScrFI | CCNGG | 1 cut(s) | 96 |
| SetI | ASST | 1 cut(s) | 63 |
| SgrAI | CRCCGGYG | 1 cut(s) | 150 |
| SmlI | CTYRAG | 1 cut(s) | 43 |
| SmoI | CTYRAG | 1 cut(s) | 43 |
| SsiI | CCGC | 1 cut(s) | 21 |
| StyD4I | CCNGG | 1 cut(s) | 94 |
| StyI | CCWWGG | 1 cut(s) | 121 |
| TaaI | ACNGT | 1 cut(s) | 76 |
| TauI | GCSGC | 1 cut(s) | 24 |
| TspGWI | ACGGA | 1 cut(s) | 147 |