pycom17g00160
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0004578
Physical Location & Seq
Forward (+)
130058 .. 132505
2448 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g00160.5

Sequence Viewer

Length: 1143 bp
ATGTCAGCGTCTCTTGCAGCAATATTTGGAGGTGCTGCAGGAGCCGTGGCTTTGGTGGGGATAAGTATCTTACTCATATGGTTCTGTATATTTCGCAATAGGAGTGTTTCAAGAACTTCTGAAACGGGTTCTTCTGATCCTTCTGTTCAAGTGGGAAGACATGGTGGGGTTGAGTTGTCAATGCGAGAAACAAGGCGTTTTCAGATGGAAGAACTGTCTCTGGCCACCAAAAATTTCAGTGACAAAAATTTGATTGGGCAAGGGAAATTTGGGGAGGTGTATATGGGATTTCTCCAGGATGGGATGCTCGTAGCCATCAAAAAGCGACCTGGAACAGCTAGTCAGGAATTTATCAATGAGGTACACTATCTCTCGGCTATTCAGCATCGGAATATTGTTACTCTTTTGGGTTACTGCCAAGAAAATAATCTACAGTTTCTTGTGTACGAGTACATTCATAGTGGAAGTGTTTCCAGTCACTTGTACGGCACTGGTCAGCATTCACGTGAAAAGCTAGAATTCAAGAATCGTCTAACAATAGCTCAAGGGGCCGCTAAAGGTTTGGCTCATCTTCACTCTCTGAGTCCCCGTCTGGTGCACAAGGATTTTAAGACAGCCAATGTTCTCGTAGATGAAAACTTCATAGCTAAGGTTGCAGATGCAGGAATTCGCAATTTCCTGGGAAGAGTTGATATTGCAGGCTCGTCTTCTCAAGTGACTGCTGATGAGATGTTCCTTGCTCCAGAGGTCAGAGAGTTCAGACGATTTTCAGAAAAAAGTGACGTATATAGTTTTGGTGTATTCCTTCTGGAGTTAGTGAGTGGGCGAGAGGCTAGAGATTTTGCATCTTCTGACTCAACCCAGAACATGGTTGAATGGGTGCAAAATATTCAAGAGGGCAGCAATGTATCGTGCATCATCGATGAGAGGTTGGGGAATAGCTTCACAGGAGAAGCTATGGAAGGGTTGATACAGTTGATAATGCGATGTGTGGAAGCTTCAAGTGAGAGGCGACCGGGCATGAGCCATGTGGTAATGGAGCTGGACCGGATAGTTGAGAAAGAGATGAGCTTGACAACAATCATGGGGGAAGGAACCTCTACGGTGATCCCGGGAAGTCAGTTATTTAAAGCAACAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

381

Amino Acids

41.93

Weight (kDa)

6.23

Isoelectric Point (pI)

30.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 868
AciI CCGC 1 cut(s) 552
AclWI GGATC 2 cut(s) 131, 1102
AcoI YGGCCR 1 cut(s) 222
AcsI RAATTY 6 cut(s) 232, 247, 266, 347, 518, 666
AcvI CACGTG 1 cut(s) 506
AfaI GTAC 4 cut(s) 363, 446, 452, 485
AfiI CCNNNNNNNGG 1 cut(s) 868
AgsI TTSAA 6 cut(s) 111, 149, 523, 875, 893, 1002
AjnI CCWGG 3 cut(s) 294, 328, 678
AluBI AGCT 9 cut(s) 338, 514, 542, 647, 942, 956, 998, 1042, 1071
AluI AGCT 9 cut(s) 338, 514, 542, 647, 942, 956, 998, 1042, 1071
Alw21I GWGCWC 1 cut(s) 600
Alw26I GTCTC 2 cut(s) 15, 222
Alw44I GTGCAC 1 cut(s) 596
AlwI GGATC 2 cut(s) 131, 1102
Ama87I CYCGRG 1 cut(s) 1111
AoxI GGCC 2 cut(s) 222, 549
ApaLI GTGCAC 1 cut(s) 596
ApeKI GCWGC 3 cut(s) 17, 35, 900
ApoI RAATTY 6 cut(s) 232, 247, 266, 347, 518, 666
Asp700I GAANNNNTTC 2 cut(s) 469, 941
AspS9I GGNCC 2 cut(s) 549, 1045
AsuC2I CCSGG 3 cut(s) 1017, 1112, 1113
AsuHPI GGTGA 1 cut(s) 1117
AvaI CYCGRG 1 cut(s) 1111
AvaII GGWCC 1 cut(s) 1045
BaeGI GKGCMC 1 cut(s) 600
BalI TGGCCA 1 cut(s) 224
BarI GAAGNNNNNNTAC 2 cut(s) 954, 986
BbrPI CACGTG 1 cut(s) 506
BbsI GAAGAC 2 cut(s) 163, 699
Bbv12I GWGCWC 1 cut(s) 600
BbvI GCAGC 3 cut(s) 22, 29, 912
BccI CCATC 3 cut(s) 199, 293, 323
BceAI ACGGC 2 cut(s) 29, 502
BciT130I CCWGG 3 cut(s) 296, 330, 680
BcnI CCSGG 3 cut(s) 1017, 1112, 1113
BcoDI GTCTC 2 cut(s) 15, 222
BfaI CTAG 3 cut(s) 339, 515, 834
BfmI CTRYAG 2 cut(s) 36, 431
BisI GCNGC 4 cut(s) 18, 36, 552, 901
BlsI GCNGC 4 cut(s) 19, 37, 553, 902
Bme1390I CCNGG 6 cut(s) 296, 330, 680, 1017, 1112, 1113
Bme18I GGWCC 1 cut(s) 1045
BmeT110I CYCGRG 1 cut(s) 1111
BmgT120I GGNCC 2 cut(s) 549, 1045
BmiI GGNNCC 3 cut(s) 43, 550, 1096
BmrFI CCNGG 6 cut(s) 296, 330, 680, 1017, 1112, 1113
BmsI GCATC 5 cut(s) 294, 394, 649, 854, 924
BpiI GAAGAC 2 cut(s) 163, 699
BpmI CTGGAG 3 cut(s) 278, 726, 830
Bpu10I CCTNAGC 1 cut(s) 648
BpuEI CTTGAG 2 cut(s) 528, 696
BpuMI CCSGG 3 cut(s) 1017, 1112, 1113
Bsa29I ATCGAT 1 cut(s) 921
BsaAI YACGTR 1 cut(s) 506
BsaBI GATNNNNATC 1 cut(s) 65
BsaJI CCNNGG 3 cut(s) 45, 679, 1111
BsaWI WCCGGW 1 cut(s) 1047
Bsc4I CCNNNNNNNGG 1 cut(s) 868
Bse1I ACTGG 2 cut(s) 474, 496
Bse3DI GCAATG 1 cut(s) 910
Bse8I GATNNNNATC 1 cut(s) 65
BseBI CCWGG 3 cut(s) 296, 330, 680
BseCI ATCGAT 1 cut(s) 921
BseDI CCNNGG 3 cut(s) 45, 679, 1111
BseGI GGATG 2 cut(s) 304, 309
BseJI GATNNNNATC 1 cut(s) 65
BseLI CCNNNNNNNGG 1 cut(s) 868
BseMI GCAATG 1 cut(s) 910
BseMII CTCAG 1 cut(s) 572
BseNI ACTGG 2 cut(s) 474, 496
BseSI GKGCMC 1 cut(s) 600
BseXI GCAGC 3 cut(s) 22, 29, 912
Bsh1285I CGRYCG 1 cut(s) 1016
BshFI GGCC 2 cut(s) 224, 551
BshVI ATCGAT 1 cut(s) 921
BsiEI CGRYCG 1 cut(s) 1016
BsiHKAI GWGCWC 1 cut(s) 600
BsiHKCI CYCGRG 1 cut(s) 1111
BsiSI CCGG 3 cut(s) 1016, 1048, 1112
BslFI GGGAC 1 cut(s) 570
BslI CCNNNNNNNGG 1 cut(s) 868
BsmAI GTCTC 2 cut(s) 15, 222
BsmBI CGTCTC 1 cut(s) 15
BsmFI GGGAC 1 cut(s) 570
BsmI GAATGC 1 cut(s) 499
BsnI GGCC 2 cut(s) 224, 551
BsoBI CYCGRG 1 cut(s) 1111
Bsp1286I GDGCHC 1 cut(s) 600
Bsp143I GATC 2 cut(s) 136, 1107
BspACI CCGC 1 cut(s) 552
BspANI GGCC 2 cut(s) 224, 551
BspCNI CTCAG 1 cut(s) 573
BspDI ATCGAT 1 cut(s) 921
BspLI GGNNCC 3 cut(s) 43, 550, 1096
BspMAI CTGCAG 1 cut(s) 40
BspPI GGATC 2 cut(s) 131, 1102
BsrDI GCAATG 1 cut(s) 910
BsrI ACTGG 2 cut(s) 474, 496
BssECI CCNNGG 3 cut(s) 45, 679, 1111
BssMI GATC 2 cut(s) 136, 1107
Bst2UI CCWGG 3 cut(s) 296, 330, 680
Bst4CI ACNGT 4 cut(s) 216, 435, 975, 1105
Bst6I CTCTTC 1 cut(s) 679
BstBAI YACGTR 1 cut(s) 506
BstC8I GCNNGC 1 cut(s) 700
BstDEI CTNAG 2 cut(s) 581, 648
BstDSI CCRYGG 1 cut(s) 45
BstF5I GGATG 2 cut(s) 304, 309
BstKTI GATC 2 cut(s) 139, 1110
BstMAI GTCTC 2 cut(s) 15, 222
BstMBI GATC 2 cut(s) 136, 1107
BstMCI CGRYCG 1 cut(s) 1016
BstMWI GCNNNNNNNGC 4 cut(s) 14, 41, 548, 653
BstNI CCWGG 3 cut(s) 296, 330, 680
BstSCI CCNGG 6 cut(s) 294, 328, 678, 1015, 1110, 1111
BstSFI CTRYAG 2 cut(s) 36, 431
BstSLI GKGCMC 1 cut(s) 600
BstV1I GCAGC 3 cut(s) 22, 29, 912
BstV2I GAAGAC 2 cut(s) 163, 699
Bsu15I ATCGAT 1 cut(s) 921
BsuRI GGCC 2 cut(s) 224, 551
BsuTUI ATCGAT 1 cut(s) 921
BtgI CCRYGG 1 cut(s) 45
BtgZI GCGATG 1 cut(s) 1000
BtsCI GGATG 2 cut(s) 304, 309
BtsIMutI CAGTG 2 cut(s) 244, 489
Cac8I GCNNGC 1 cut(s) 700
Cfr13I GGNCC 2 cut(s) 549, 1045
Cfr9I CCCGGG 1 cut(s) 1111
ClaI ATCGAT 1 cut(s) 921
Csp6I GTAC 4 cut(s) 362, 445, 451, 484
CviAII CATG 5 cut(s) 161, 868, 1021, 1028, 1084
CviQI GTAC 4 cut(s) 362, 445, 451, 484
DdeI CTNAG 2 cut(s) 581, 648
DpnI GATC 2 cut(s) 138, 1109
DpnII GATC 2 cut(s) 136, 1107
DraI TTTAAA 1 cut(s) 1129
EaeI YGGCCR 1 cut(s) 222
Eam1104I CTCTTC 1 cut(s) 679
EarI CTCTTC 1 cut(s) 679
Eco47I GGWCC 1 cut(s) 1045
Eco72I CACGTG 1 cut(s) 506
Eco88I CYCGRG 1 cut(s) 1111
EcoRI GAATTC 2 cut(s) 518, 666
EcoRII CCWGG 3 cut(s) 294, 328, 678
Esp3I CGTCTC 1 cut(s) 15
FaeI CATG 5 cut(s) 164, 871, 1024, 1031, 1087
FaqI GGGAC 1 cut(s) 570
FatI CATG 5 cut(s) 160, 867, 1020, 1027, 1083
FauNDI CATATG 1 cut(s) 77
Fnu4HI GCNGC 4 cut(s) 18, 36, 552, 901
FokI GGATG 2 cut(s) 311, 316
Fsp4HI GCNGC 4 cut(s) 18, 36, 552, 901
FspBI CTAG 3 cut(s) 339, 515, 834
GluI GCNGC 4 cut(s) 18, 36, 552, 901
GsuI CTGGAG 3 cut(s) 278, 726, 830
HaeIII GGCC 2 cut(s) 224, 551
HapII CCGG 3 cut(s) 1016, 1048, 1112
Hin1II CATG 5 cut(s) 164, 871, 1024, 1031, 1087
HindIII AAGCTT 1 cut(s) 996
HinfI GANTC 3 cut(s) 526, 583, 854
HpaII CCGG 3 cut(s) 1016, 1048, 1112
HphI GGTGA 1 cut(s) 1117
Hpy166II GTNNAC 3 cut(s) 364, 445, 598
Hpy188I TCNGA 9 cut(s) 121, 136, 204, 390, 582, 752, 761, 772, 853
Hpy188III TCNNGA 6 cut(s) 111, 344, 523, 743, 809, 893
Hpy8I GTNNAC 3 cut(s) 364, 445, 598
HpyAV CCTTC 4 cut(s) 150, 815, 956, 1085
HpyCH4III ACNGT 4 cut(s) 216, 435, 975, 1105
HpyCH4IV ACGT 2 cut(s) 505, 783
HpyCH4V TGCA 9 cut(s) 17, 38, 598, 656, 662, 698, 845, 883, 915
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 41, 548, 653
HpyF3I CTNAG 2 cut(s) 581, 648
HpySE526I ACGT 2 cut(s) 505, 783
Hsp92II CATG 5 cut(s) 164, 871, 1024, 1031, 1087
Kzo9I GATC 2 cut(s) 136, 1107
LmnI GCTCC 3 cut(s) 41, 745, 1039
Lsp1109I GCAGC 3 cut(s) 22, 29, 912
LweI GCATC 5 cut(s) 294, 394, 649, 854, 924
MaeI CTAG 3 cut(s) 339, 515, 834
MaeII ACGT 2 cut(s) 505, 783
MaeIII GTNAC 6 cut(s) 239, 397, 410, 476, 715, 779
MalI GATC 2 cut(s) 138, 1109
MboI GATC 2 cut(s) 136, 1107
MboII GAAGA 7 cut(s) 123, 168, 221, 563, 696, 699, 840
MhlI GDGCHC 1 cut(s) 600
MlsI TGGCCA 1 cut(s) 224
MluCI AATT 7 cut(s) 232, 247, 266, 347, 518, 666, 673
MluNI TGGCCA 1 cut(s) 224
MlyI GAGTC 2 cut(s) 592, 848
MnlI CCTC 9 cut(s) 23, 268, 352, 739, 823, 889, 921, 1002, 1108
Mox20I TGGCCA 1 cut(s) 224
MroXI GAANNNNTTC 2 cut(s) 469, 941
MscI TGGCCA 1 cut(s) 224
MseI TTAA 2 cut(s) 609, 1128
MslI CAYNNNNRTG 1 cut(s) 504
Msp20I TGGCCA 1 cut(s) 224
MspI CCGG 3 cut(s) 1016, 1048, 1112
MspR9I CCNGG 6 cut(s) 296, 330, 680, 1017, 1112, 1113
Mva1269I GAATGC 1 cut(s) 499
MvaI CCWGG 3 cut(s) 296, 330, 680
MwoI GCNNNNNNNGC 4 cut(s) 14, 41, 548, 653
NciI CCSGG 3 cut(s) 1017, 1112, 1113
NdeI CATATG 1 cut(s) 77
NdeII GATC 2 cut(s) 136, 1107
NlaIII CATG 5 cut(s) 164, 871, 1024, 1031, 1087
NlaIV GGNNCC 3 cut(s) 43, 550, 1096
NmeAIII GCCGAG 1 cut(s) 353
NmuCI GTSAC 4 cut(s) 239, 476, 715, 779
PctI GAATGC 1 cut(s) 499
PdmI GAANNNNTTC 2 cut(s) 469, 941
PfeI GAWTC 1 cut(s) 526
PflMI CCANNNNNTGG 1 cut(s) 868
PfoI TCCNGGA 1 cut(s) 294
PkrI GCNGC 4 cut(s) 19, 37, 553, 902
PleI GAGTC 2 cut(s) 591, 848
PmaCI CACGTG 1 cut(s) 506
PmlI CACGTG 1 cut(s) 506
PpsI GAGTC 2 cut(s) 591, 848
Ppu21I YACGTR 1 cut(s) 506
Psp6I CCWGG 3 cut(s) 294, 328, 678
PspCI CACGTG 1 cut(s) 506
PspGI CCWGG 3 cut(s) 294, 328, 678
PspN4I GGNNCC 3 cut(s) 43, 550, 1096
PspPI GGNCC 2 cut(s) 549, 1045
PstI CTGCAG 1 cut(s) 40
RsaI GTAC 4 cut(s) 363, 446, 452, 485
RsaNI GTAC 4 cut(s) 362, 445, 451, 484
RseI CAYNNNNRTG 1 cut(s) 504
SaqAI TTAA 2 cut(s) 609, 1128
SatI GCNGC 4 cut(s) 18, 36, 552, 901
Sau3AI GATC 2 cut(s) 136, 1107
Sau96I GGNCC 2 cut(s) 549, 1045
SchI GAGTC 2 cut(s) 592, 848
ScrFI CCNGG 6 cut(s) 296, 330, 680, 1017, 1112, 1113
SduI GDGCHC 1 cut(s) 600
SfaNI GCATC 5 cut(s) 294, 394, 649, 854, 924
SfcI CTRYAG 2 cut(s) 36, 431
SinI GGWCC 1 cut(s) 1045
SmaI CCCGGG 1 cut(s) 1113
SmiMI CAYNNNNRTG 1 cut(s) 504
SmlI CTYRAG 2 cut(s) 543, 711
SmoI CTYRAG 2 cut(s) 543, 711
Sse9I AATT 7 cut(s) 232, 247, 266, 347, 518, 666, 673
SsiI CCGC 1 cut(s) 552
SspI AATATT 3 cut(s) 24, 394, 889
SspMI CTAG 3 cut(s) 339, 515, 834
StyD4I CCNGG 6 cut(s) 294, 328, 678, 1015, 1110, 1111
TaaI ACNGT 4 cut(s) 216, 435, 975, 1105
TaiI ACGT 2 cut(s) 508, 786
TaqI TCGA 1 cut(s) 921
TasI AATT 7 cut(s) 232, 247, 266, 347, 518, 666, 673
TatI WGTACW 1 cut(s) 450
TauI GCSGC 1 cut(s) 554
TfiI GAWTC 1 cut(s) 526
Tru1I TTAA 2 cut(s) 609, 1128
Tru9I TTAA 2 cut(s) 609, 1128
TscAI CASTG 2 cut(s) 244, 496
TseFI GTSAC 4 cut(s) 239, 476, 715, 779
TseI GCWGC 3 cut(s) 17, 35, 900
Tsp45I GTSAC 4 cut(s) 239, 476, 715, 779
TspDTI ATGAA 3 cut(s) 446, 631, 648
TspMI CCCGGG 1 cut(s) 1111
TspRI CASTG 2 cut(s) 244, 496
Van91I CCANNNNNTGG 1 cut(s) 868
VneI GTGCAC 1 cut(s) 596
VpaK11BI GGWCC 1 cut(s) 1045
XapI RAATTY 6 cut(s) 232, 247, 266, 347, 518, 666
XmaI CCCGGG 1 cut(s) 1111
XmnI GAANNNNTTC 2 cut(s) 469, 941
XspI CTAG 3 cut(s) 339, 515, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.