Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004578

Physical Location & Seq

Genomic Coordinates Reverse (-)

83263033 .. 83267508

Gene Structure 4476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022428

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGTCAGCGTCTCTTGCAGCAATACTTGGAGGTGCTGCAGGAGCCGTGGCATTGGTGGGGATAATTATCATACTTATCGGGTTCTGTCTTCACAGTAGGAGTGTTTCGAGAACTTCTGAGACAGGTTCTTCTGATCCATCTGTTCAAGTGGGAAGACATGGTGGGGTTGAGTTGTCAATACGAGAAACAAGGCGTTTTCAGATGGAAGAATTGTCTCTGGCCACAAAAAATTTTAGTGATACAAATTTGATTGGGGTAGGAAAATTTGGGGAGGTGTATATGGGTTTTCTTCATGACGGGATGCTTGTAGCCATCAAAAAGCGATCTGGATTACCTAGTCAGGAGTTTATTAATGAGGTAAACTATCTCTCAGCTATTCAGCATCGGAATATTGTTACTCTGTTGGGCTACTGCCAGGAAAATAATCTGCAGTTTCTTGTGTATGAGTATATTCATAGTGGAAGTGTTTCGAGTCACTTATATGGCACTGGTCAGCATGTTCGTGAAAAGCTAGAATTCAAGAATCGACTATCAATAGCTCTAGGGGCAGCTAAAGGCTTGGCTTACCTTCACTCTTTGAGTCCTCGTCTGGTGCATAAGGACTTTAAAACAGCCAATGTTCTTGTAGATGAAAATTTCATTGCTAAGGTTGCAGATGCAGGAATTCGCAATTTCTTGGGAAAAGATATGGCAGGCCCATCTTCTCAAGTGATTACTGATGAGATATTCCTTTCTCCAGAGGTAAGAGAATTTAGACGATTTTCTGAAAAAAGTGATGTATATAGCTTTGGGGTCTTCCTTATGGAGTTGGTAAGTGGCAGAGAAGCAGCAAAATTGACATCTTCTGACTGGAATCAGAACATTTTTGAATGGGTACAAAATATCCAAGATGATGGCAATATTTCCAGCATCATCGATGAGAGATTGGGGAATAGCTTCACAGCTGAAGCTATGGAAAAGTTGATACAGTTGATAATAAGATGTGTAGAAGCTTCGAGTGAAAGGCGACCGGCGATGAGCTATGTGGTAATGGAACTAGAGGGGATACTTGAGAAAGAGATGAGCTTGACAACAATCATGGGGGAAGGAACCTCGACTGTGATCCCAGGAAGTCTCTTAGATGAAGATGACCATGCCTCATCGGTGGTTGCTGAATTCGAGTTAGAGTTATTGCTTATGAGCCGTTATTATGAGCTAGCGAGTCTTGCATTAATTTTCAGCTGCTGCGAATCCATGTCTCCATCTCATCCTCTCCCACCTTCCCAATCGCAAGGAACATCAACCTCGGAGGGCAGCCCTGCTAGGTCACCCTTGTCCCACGAGTACAGCCTCGCCGTCCAAAGCACTTCCTACAATGAGATTTGGTCTAGGATTCACGTCAACCAACAACATGAGGATGGGGATGATGATGATGTGGAAGACCAACTGGTATTGGAGCGAGTGCTTCAGCCCAACCGACAGTGCGTGGAAGAGGCCCTCCGCCACGCCGAGTCTAACTCCCTCACTATTCTCGTCTCCGACTACTTCCGCCACAGCGAGGACGCCACCCATCTCTGTCTGCTCCTCCACCGCAGCGTCTATCGAGCACGTCACCTTTACGCCCCTCTCCATCAACTGCTCGACGTTTTCGAACCAGACTCGAGCCTCAACCAATCTCAGTGCAGTCACGCCTTGGACATCTTCCAACAATTCGACCGCCACGACAACCCCTTCCCCGCCCCCGACTCCCACAACTTCGACGACACACGCCGCCTCTTCAACGACCTCAAGCAGCAGCTCGATCGCCACCTCCGCGCCTCCCGCTCCAAAATTCGCCGCATTCGCCGAGCCAATGTTGCGTCCACTATATGCCTCATTGGAACTGCCGTGGGAGTAGTGGCTTCTGTGGCCGCAATCACGGCCCACGCTCTGGCGGCGTTTGTTGTGGCGGGGCCTTTGTGCTGCAGCGGCAGCAGAGCGAGTGCGACGACAAACAAGGAGGTTGCCCATATGAAACAAGTGGATGCTGCGGCCAAGGGGACGTGTGTGCTGAACAATGATCTGGCGACCATTGACCGGCTGGCGCGGCGCCTACATACGGCGGTGGAGGGCGACAAGCTTCTGATTCGGCTGGGATTGGAGAGGGGAGCTCAAGACAAGCATCCCATTCAGGAGGTGCTTAAGCAGCTGCGCAAGAGCCACCCTAATTTCCTCCACCTTGTCAAGGAACTTGATCAACATATATGCCTCTGCTTTAACACCATTAACAGGGCCAGGTCGCTGCTTCTCCAAGAGATCTACAATCTCCAAACAGAGGCAGCCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

769

Amino Acids

85.25

Weight (kDa)

5.87

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	80 - 342	1.9e-33	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	82 - 346	7.6e-43	Protein tyrosine and serine/threonine kinase
DUF677	PF05055	497 - 759	1.6e-14	Protein of unknown function (DUF677)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004578)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19250 AT3G19330 AT3G19330 AT3G19330 AT3G19330
fragaria_vesca	FvH4_6g54380 FvH4_6g54381
malus_domestica	MD09G1001900.v1.1 MD09G1002000.v1.1 MD17G1006100.v1.1 MD17G1006200.v1.1
prunus_persica	Prupe.3G314200_v2.0.a1 Prupe.3G314300_v2.0.a1
pyrus_communis	pycom111g00150 pycom17g00160
rosa_chinensis	RchiOBHm_Chr2g0176601 RchiOBHm_Chr2g0176611
rosa_laevigata	RLG00000022428
rosa_multiflora	Rmu_co8463679.1_g000001 Rmu_sc0001417.1_g000013 Rmu_sc0039568.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076270
rosa_rugosa	Rorug02G0596300
rosa_samantha	Rh2AG674400 Rh2BG685500 Rh2CG648700 Rh2CG648800 Rh2DG699600 Rh2DG699700
rosa_wichuraiana	Rw2G055320 Rw2G055330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2171
AccB1I	GGYRCC	1 cut(s)	2067
AccB7I	CCANNNNNTGG	1 cut(s)	1909
AccBSI	CCGCTC	1 cut(s)	1803
AccII	CGCG	2 cut(s)	1794, 2065
AclWI	GGATC	2 cut(s)	128, 1096
AcoI	YGGCCR	3 cut(s)	219, 1887, 2010
AcsI	RAATTY	9 cut(s)	229, 244, 263, 515, 634, 663, 749, 1154, 1809
AcuI	CTGAAG	2 cut(s)	966, 1430
AcyI	GRCGYC	2 cut(s)	1542, 2068
AfaI	GTAC	2 cut(s)	876, 1325
AfiI	CCNNNNNNNGG	7 cut(s)	1537, 1909, 2055, 2077, 2203, 2247, 2293
AflII	CTTAAG	1 cut(s)	2159
AflIII	ACRYGT	1 cut(s)	2021
AgsI	TTSAA	4 cut(s)	146, 520, 869, 1759
AjiI	CACGTC	3 cut(s)	1378, 1589, 2022
AjnI	CCWGG	3 cut(s)	414, 1105, 2252
Alw21I	GWGCWC	2 cut(s)	1588, 2131
Alw26I	GTCTC	6 cut(s)	15, 113, 219, 1118, 1242, 1519
AlwI	GGATC	2 cut(s)	128, 1096
AlwNI	CAGNNNCTG	1 cut(s)	1224
Ama87I	CYCGRG	1 cut(s)	1639
AoxI	GGCC	8 cut(s)	219, 694, 1473, 1887, 1899, 1931, 2010, 2250
ApoI	RAATTY	9 cut(s)	229, 244, 263, 515, 634, 663, 749, 1154, 1809
AseI	ATTAAT	2 cut(s)	351, 1211
Asp700I	GAANNNNTTC	2 cut(s)	466, 935
AspLEI	GCGC	4 cut(s)	1796, 2065, 2070, 2172
AspS9I	GGNCC	5 cut(s)	695, 1474, 1900, 1931, 2250
AsuHPI	GGTGA	2 cut(s)	1299, 1583
AsuII	TTCGAA	1 cut(s)	1629
AsuNHI	GCTAGC	1 cut(s)	1195
AvaI	CYCGRG	1 cut(s)	1639
BalI	TGGCCA	1 cut(s)	221
BanI	GGYRCC	1 cut(s)	2067
BanII	GRGCYC	1 cut(s)	2131
BauI	CACGAG	1 cut(s)	1319
BbsI	GAAGAC	4 cut(s)	80, 160, 787, 1425
Bbv12I	GWGCWC	2 cut(s)	1588, 2131
BccI	CCATC	9 cut(s)	145, 196, 320, 706, 887, 1249, 1391, 1557, 1617
BceAI	ACGGC	6 cut(s)	29, 1167, 1319, 1850, 1914, 2094
BcgI	CGANNNNNNTGC	2 cut(s)	1763, 1797
BciT130I	CCWGG	3 cut(s)	416, 1107, 2254
BciVI	GTATCC	1 cut(s)	1038
BclI	TGATCA	1 cut(s)	2212
BcoDI	GTCTC	6 cut(s)	15, 113, 219, 1118, 1242, 1519
BfaI	CTAG	7 cut(s)	336, 512, 542, 1037, 1196, 1302, 1368
BfmI	CTRYAG	3 cut(s)	36, 428, 1942
BfoI	RGCGCY	1 cut(s)	2071
BfrI	CTTAAG	1 cut(s)	2159
BfuI	GTATCC	1 cut(s)	1038
BglII	AGATCT	1 cut(s)	2274
Bme1390I	CCNGG	3 cut(s)	416, 1107, 2254
BmeT110I	CYCGRG	1 cut(s)	1639
BmgBI	CACGTC	3 cut(s)	1378, 1589, 2022
BmgT120I	GGNCC	5 cut(s)	695, 1474, 1900, 1931, 2250
BmiI	GGNNCC	4 cut(s)	43, 1090, 1932, 2069
BmrFI	CCNGG	3 cut(s)	416, 1107, 2254
BmsI	GCATC	6 cut(s)	291, 391, 646, 918, 1993, 2149
BmtI	GCTAGC	1 cut(s)	1199
BpiI	GAAGAC	4 cut(s)	80, 160, 787, 1425
BplI	GAGNNNNNCTC	4 cut(s)	1481, 1513, 2113, 2145
BpmI	CTGGAG	1 cut(s)	720
Bpu10I	CCTNAGC	1 cut(s)	645
Bpu14I	TTCGAA	1 cut(s)	1629
BpuEI	CTTGAG	4 cut(s)	690, 1070, 1751, 2115
Bsa29I	ATCGAT	1 cut(s)	915
BsaBI	GATNNNNATC	1 cut(s)	65
BsaHI	GRCGYC	2 cut(s)	1542, 2068
BsaJI	CCNNGG	6 cut(s)	45, 1105, 1284, 1671, 1866, 2013
Bsc4I	CCNNNNNNNGG	7 cut(s)	1537, 1909, 2055, 2077, 2203, 2247, 2293
Bse118I	RCCGGY	2 cut(s)	1009, 2055
Bse1I	ACTGG	3 cut(s)	493, 854, 1431
Bse3DI	GCAATG	1 cut(s)	639
Bse8I	GATNNNNATC	1 cut(s)	65
BseBI	CCWGG	3 cut(s)	416, 1107, 2254
BseCI	ATCGAT	1 cut(s)	915
BseDI	CCNNGG	6 cut(s)	45, 1105, 1284, 1671, 1866, 2013
BseGI	GGATG	6 cut(s)	306, 1246, 1402, 1408, 2008, 2140
BseJI	GATNNNNATC	1 cut(s)	65
BseLI	CCNNNNNNNGG	7 cut(s)	1537, 1909, 2055, 2077, 2203, 2247, 2293
BseMI	GCAATG	1 cut(s)	639
BseMII	CTCAG	3 cut(s)	108, 384, 1670
BseNI	ACTGG	3 cut(s)	493, 854, 1431
BseRI	GAGGAG	1 cut(s)	1553
BseYI	CCCAGC	1 cut(s)	2110
BsgI	GTGCAG	1 cut(s)	1681
Bsh1236I	CGCG	2 cut(s)	1794, 2065
Bsh1285I	CGRYCG	3 cut(s)	1010, 1696, 1783
BshFI	GGCC	8 cut(s)	221, 696, 1475, 1889, 1901, 1933, 2012, 2252
BshNI	GGYRCC	1 cut(s)	2067
BshVI	ATCGAT	1 cut(s)	915
BsiEI	CGRYCG	3 cut(s)	1010, 1696, 1783
BsiHKAI	GWGCWC	2 cut(s)	1588, 2131
BsiHKCI	CYCGRG	1 cut(s)	1639
BsiSI	CCGG	2 cut(s)	1010, 2056
BslFI	GGGAC	2 cut(s)	1300, 2032
BslI	CCNNNNNNNGG	7 cut(s)	1537, 1909, 2055, 2077, 2203, 2247, 2293
BsmAI	GTCTC	6 cut(s)	15, 113, 219, 1118, 1242, 1519
BsmBI	CGTCTC	2 cut(s)	15, 1519
BsmFI	GGGAC	2 cut(s)	1300, 2032
BsmI	GAATGC	1 cut(s)	1818
BsnI	GGCC	8 cut(s)	221, 696, 1475, 1889, 1901, 1933, 2012, 2252
BsoBI	CYCGRG	1 cut(s)	1639
Bsp119I	TTCGAA	1 cut(s)	1629
Bsp1286I	GDGCHC	2 cut(s)	1588, 2131
Bsp143I	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
BspANI	GGCC	8 cut(s)	221, 696, 1475, 1889, 1901, 1933, 2012, 2252
BspCNI	CTCAG	3 cut(s)	109, 383, 1669
BspDI	ATCGAT	1 cut(s)	915
BspFNI	CGCG	2 cut(s)	1794, 2065
BspHI	TCATGA	1 cut(s)	292
BspLI	GGNNCC	4 cut(s)	43, 1090, 1932, 2069
BspMAI	CTGCAG	3 cut(s)	40, 432, 1946
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	2 cut(s)	128, 1096
BspT104I	TTCGAA	1 cut(s)	1629
BspT107I	GGYRCC	1 cut(s)	2067
BspTI	CTTAAG	1 cut(s)	2159
BsrBI	CCGCTC	1 cut(s)	1803
BsrDI	GCAATG	1 cut(s)	639
BsrFI	RCCGGY	2 cut(s)	1009, 2055
BsrI	ACTGG	3 cut(s)	493, 854, 1431
BssAI	RCCGGY	2 cut(s)	1009, 2055
BssECI	CCNNGG	6 cut(s)	45, 1105, 1284, 1671, 1866, 2013
BssMI	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
BssNI	GRCGYC	2 cut(s)	1542, 2068
BssSI	CACGAG	1 cut(s)	1319
BssT1I	CCWWGG	2 cut(s)	1671, 2013
Bst2BI	CACGAG	1 cut(s)	1319
Bst2UI	CCWGG	3 cut(s)	416, 1107, 2254
Bst4CI	ACNGT	4 cut(s)	95, 969, 1099, 1461
Bst6I	CTCTTC	2 cut(s)	1464, 1760
BstACI	GRCGYC	2 cut(s)	1542, 2068
BstAFI	CTTAAG	1 cut(s)	2159
BstBI	TTCGAA	1 cut(s)	1629
BstC8I	GCNNGC	4 cut(s)	694, 1197, 2061, 2302
BstDEI	CTNAG	5 cut(s)	117, 370, 645, 1117, 1656
BstDSI	CCRYGG	2 cut(s)	45, 1866
BstEII	GGTNACC	1 cut(s)	1305
BstENI	CCTNNNNNAGG	1 cut(s)	2201
BstF5I	GGATG	6 cut(s)	306, 1246, 1402, 1408, 2008, 2140
BstFNI	CGCG	2 cut(s)	1794, 2065
BstH2I	RGCGCY	1 cut(s)	2071
BstHHI	GCGC	4 cut(s)	1796, 2065, 2070, 2172
BstKTI	GATC	7 cut(s)	136, 326, 1104, 1783, 2041, 2215, 2277
BstMAI	GTCTC	6 cut(s)	15, 113, 219, 1118, 1242, 1519
BstMBI	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
BstMCI	CGRYCG	3 cut(s)	1010, 1696, 1783
BstNI	CCWGG	3 cut(s)	416, 1107, 2254
BstNSI	RCATGY	1 cut(s)	500
BstPI	GGTNACC	1 cut(s)	1305
BstSCI	CCNGG	3 cut(s)	414, 1105, 2252
BstSFI	CTRYAG	3 cut(s)	36, 428, 1942
BstUI	CGCG	2 cut(s)	1794, 2065
BstV2I	GAAGAC	4 cut(s)	80, 160, 787, 1425
BstX2I	RGATCY	1 cut(s)	2274
BstXI	CCANNNNNNTGG	1 cut(s)	893
BstYI	RGATCY	1 cut(s)	2274
Bsu15I	ATCGAT	1 cut(s)	915
BsuI	GTATCC	1 cut(s)	1038
BsuRI	GGCC	8 cut(s)	221, 696, 1475, 1889, 1901, 1933, 2012, 2252
BsuTUI	ATCGAT	1 cut(s)	915
BtgI	CCRYGG	2 cut(s)	45, 1866
BtgZI	GCGATG	1 cut(s)	1028
BtrI	CACGTC	3 cut(s)	1378, 1589, 2022
BtsCI	GGATG	6 cut(s)	306, 1246, 1402, 1408, 2008, 2140
BtsIMutI	CAGTG	3 cut(s)	486, 1466, 1664
Cac8I	GCNNGC	4 cut(s)	694, 1197, 2061, 2302
CaiI	CAGNNNCTG	1 cut(s)	1224
CciI	TCATGA	1 cut(s)	292
CfoI	GCGC	4 cut(s)	1796, 2065, 2070, 2172
Cfr10I	RCCGGY	2 cut(s)	1009, 2055
Cfr13I	GGNCC	5 cut(s)	695, 1474, 1900, 1931, 2250
ClaI	ATCGAT	1 cut(s)	915
CseI	GACGC	3 cut(s)	1550, 1564, 1827
Csp6I	GTAC	2 cut(s)	875, 1324
CviAII	CATG	7 cut(s)	158, 293, 497, 1078, 1133, 1234, 1391
CviQI	GTAC	2 cut(s)	875, 1324
DdeI	CTNAG	5 cut(s)	117, 370, 645, 1117, 1656
DinI	GGCGCC	1 cut(s)	2069
DpnI	GATC	7 cut(s)	135, 325, 1103, 1782, 2040, 2214, 2276
DpnII	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
DraI	TTTAAA	1 cut(s)	607
EaeI	YGGCCR	3 cut(s)	219, 1887, 2010
Eam1104I	CTCTTC	2 cut(s)	1464, 1760
EarI	CTCTTC	2 cut(s)	1464, 1760
EciI	GGCGGA	2 cut(s)	1469, 1517
Ecl136II	GAGCTC	1 cut(s)	2129
Eco130I	CCWWGG	2 cut(s)	1671, 2013
Eco24I	GRGCYC	1 cut(s)	2131
Eco53kI	GAGCTC	1 cut(s)	2129
Eco57I	CTGAAG	2 cut(s)	966, 1430
Eco88I	CYCGRG	1 cut(s)	1639
Eco91I	GGTNACC	1 cut(s)	1305
EcoICRI	GAGCTC	1 cut(s)	2129
EcoNI	CCTNNNNNAGG	1 cut(s)	2201
EcoO109I	RGGNCCY	2 cut(s)	1474, 1931
EcoO65I	GGTNACC	1 cut(s)	1305
EcoRI	GAATTC	3 cut(s)	515, 663, 1154
EcoRII	CCWGG	3 cut(s)	414, 1105, 2252
EcoT14I	CCWWGG	2 cut(s)	1671, 2013
EcoT38I	GRGCYC	1 cut(s)	2131
EgeI	GGCGCC	1 cut(s)	2069
EheI	GGCGCC	1 cut(s)	2069
ErhI	CCWWGG	2 cut(s)	1671, 2013
Esp3I	CGTCTC	2 cut(s)	15, 1519
FaeI	CATG	7 cut(s)	161, 296, 500, 1081, 1136, 1237, 1394
FaqI	GGGAC	2 cut(s)	1300, 2032
FatI	CATG	7 cut(s)	157, 292, 496, 1077, 1132, 1233, 1390
FauI	CCCGC	3 cut(s)	1723, 1808, 1921
FauNDI	CATATG	1 cut(s)	1989
FbaI	TGATCA	1 cut(s)	2212
FokI	GGATG	6 cut(s)	313, 1233, 1409, 1415, 2015, 2127
FriOI	GRGCYC	1 cut(s)	2131
FspBI	CTAG	7 cut(s)	336, 512, 542, 1037, 1196, 1302, 1368
FspI	TGCGCA	1 cut(s)	2171
GlaI	GCGC	4 cut(s)	1795, 2064, 2069, 2171
GsaI	CCCAGC	1 cut(s)	2114
GsuI	CTGGAG	1 cut(s)	720
HaeII	RGCGCY	1 cut(s)	2071
HaeIII	GGCC	8 cut(s)	221, 696, 1475, 1889, 1901, 1933, 2012, 2252
HapII	CCGG	2 cut(s)	1010, 2056
HgaI	GACGC	3 cut(s)	1550, 1564, 1827
HhaI	GCGC	4 cut(s)	1796, 2065, 2070, 2172
Hin1I	GRCGYC	2 cut(s)	1542, 2068
Hin1II	CATG	7 cut(s)	161, 296, 500, 1081, 1136, 1237, 1394
Hin6I	GCGC	4 cut(s)	1794, 2063, 2068, 2170
HinP1I	GCGC	4 cut(s)	1794, 2063, 2068, 2170
HincII	GTYRAC	1 cut(s)	1381
HindII	GTYRAC	1 cut(s)	1381
HindIII	AAGCTT	2 cut(s)	990, 2096
HpaII	CCGG	2 cut(s)	1010, 2056
HphI	GGTGA	2 cut(s)	1299, 1583
Hpy166II	GTNNAC	3 cut(s)	361, 1381, 1842
Hpy188III	TCNNGA	9 cut(s)	108, 293, 327, 341, 503, 520, 737, 2132, 2150
Hpy8I	GTNNAC	3 cut(s)	361, 1381, 1842
Hpy99I	CGWCG	3 cut(s)	1625, 1742, 1969
HpyAV	CCTTC	4 cut(s)	578, 1079, 1269, 1720
HpyCH4III	ACNGT	4 cut(s)	95, 969, 1099, 1461
HpyCH4IV	ACGT	4 cut(s)	1377, 1588, 1623, 2021
HpyCH4V	TGCA	9 cut(s)	17, 38, 430, 595, 653, 659, 1208, 1662, 1944
HpyF3I	CTNAG	5 cut(s)	117, 370, 645, 1117, 1656
HpySE526I	ACGT	4 cut(s)	1377, 1588, 1623, 2021
Hsp92I	GRCGYC	2 cut(s)	1542, 2068
Hsp92II	CATG	7 cut(s)	161, 296, 500, 1081, 1136, 1237, 1394
HspAI	GCGC	4 cut(s)	1794, 2063, 2068, 2170
KasI	GGCGCC	1 cut(s)	2067
Ksp22I	TGATCA	1 cut(s)	2212
Kzo9I	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
LmnI	GCTCC	5 cut(s)	41, 1435, 1566, 1808, 2126
LweI	GCATC	6 cut(s)	291, 391, 646, 918, 1993, 2149
MaeI	CTAG	7 cut(s)	336, 512, 542, 1037, 1196, 1302, 1368
MaeII	ACGT	4 cut(s)	1377, 1588, 1623, 2021
MaeIII	GTNAC	5 cut(s)	394, 473, 1305, 1589, 1664
MalI	GATC	7 cut(s)	135, 325, 1103, 1782, 2040, 2214, 2276
MbiI	CCGCTC	1 cut(s)	1803
MboI	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
MflI	RGATCY	1 cut(s)	2274
MhlI	GDGCHC	2 cut(s)	1588, 2131
MlsI	TGGCCA	1 cut(s)	221
MluNI	TGGCCA	1 cut(s)	221
Mly113I	GGCGCC	1 cut(s)	2068
MlyI	GAGTC	6 cut(s)	481, 589, 1210, 1499, 1631, 1718
MmeI	TCCRAC	2 cut(s)	1542, 1708
Mox20I	TGGCCA	1 cut(s)	221
MroXI	GAANNNNTTC	2 cut(s)	466, 935
MscI	TGGCCA	1 cut(s)	221
MseI	TTAA	6 cut(s)	351, 606, 1211, 2160, 2235, 2244
MslI	CAYNNNNRTG	3 cut(s)	480, 501, 1395
Msp20I	TGGCCA	1 cut(s)	221
MspA1I	CMGCKG	5 cut(s)	944, 1221, 1947, 2167, 2304
MspCI	CTTAAG	1 cut(s)	2159
MspI	CCGG	2 cut(s)	1010, 2056
MspR9I	CCNGG	3 cut(s)	416, 1107, 2254
MteI	GCGCNGCGC	1 cut(s)	2066
Mva1269I	GAATGC	1 cut(s)	1818
MvaI	CCWGG	3 cut(s)	416, 1107, 2254
MvnI	CGCG	2 cut(s)	1794, 2065
NarI	GGCGCC	1 cut(s)	2068
NdeI	CATATG	1 cut(s)	1989
NdeII	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
NheI	GCTAGC	1 cut(s)	1195
NlaIII	CATG	7 cut(s)	161, 296, 500, 1081, 1136, 1237, 1394
NlaIV	GGNNCC	4 cut(s)	43, 1090, 1932, 2069
NmeAIII	GCCGAG	2 cut(s)	1513, 1850
NmuCI	GTSAC	4 cut(s)	473, 1305, 1589, 1664
NsbI	TGCGCA	1 cut(s)	2171
NspI	RCATGY	1 cut(s)	500
NspV	TTCGAA	1 cut(s)	1629
PaeR7I	CTCGAG	1 cut(s)	1639
PagI	TCATGA	1 cut(s)	292
PcsI	WCGNNNNNNNCGW	2 cut(s)	1626, 1698
PctI	GAATGC	1 cut(s)	1818
PdmI	GAANNNNTTC	2 cut(s)	466, 935
PfeI	GAWTC	5 cut(s)	523, 853, 1229, 1372, 2104
PflMI	CCANNNNNTGG	1 cut(s)	1909
Ple19I	CGATCG	1 cut(s)	1783
PleI	GAGTC	6 cut(s)	480, 588, 1209, 1498, 1631, 1718
PluTI	GGCGCC	1 cut(s)	2071
PpsI	GAGTC	6 cut(s)	480, 588, 1209, 1498, 1631, 1718
PshBI	ATTAAT	2 cut(s)	351, 1211
Psp124BI	GAGCTC	1 cut(s)	2131
Psp6I	CCWGG	3 cut(s)	414, 1105, 2252
PspEI	GGTNACC	1 cut(s)	1305
PspFI	CCCAGC	1 cut(s)	2110
PspGI	CCWGG	3 cut(s)	414, 1105, 2252
PspN4I	GGNNCC	4 cut(s)	43, 1090, 1932, 2069
PspPI	GGNCC	5 cut(s)	695, 1474, 1900, 1931, 2250
PspXI	VCTCGAGB	1 cut(s)	1639
PstI	CTGCAG	3 cut(s)	40, 432, 1946
PstNI	CAGNNNCTG	1 cut(s)	1224
PsuI	RGATCY	1 cut(s)	2274
PvuI	CGATCG	1 cut(s)	1783
PvuII	CAGCTG	4 cut(s)	944, 1221, 2167, 2304
RsaI	GTAC	2 cut(s)	876, 1325
RsaNI	GTAC	2 cut(s)	875, 1324
RseI	CAYNNNNRTG	3 cut(s)	480, 501, 1395
SacI	GAGCTC	1 cut(s)	2131
SaqAI	TTAA	6 cut(s)	351, 606, 1211, 2160, 2235, 2244
Sau3AI	GATC	7 cut(s)	133, 323, 1101, 1780, 2038, 2212, 2274
Sau96I	GGNCC	5 cut(s)	695, 1474, 1900, 1931, 2250
SchI	GAGTC	6 cut(s)	481, 589, 1210, 1499, 1631, 1718
ScrFI	CCNGG	3 cut(s)	416, 1107, 2254
SduI	GDGCHC	2 cut(s)	1588, 2131
SfaNI	GCATC	6 cut(s)	291, 391, 646, 918, 1993, 2149
SfcI	CTRYAG	3 cut(s)	36, 428, 1942
SfoI	GGCGCC	1 cut(s)	2069
Sfr274I	CTCGAG	1 cut(s)	1639
SfuI	TTCGAA	1 cut(s)	1629
SlaI	CTCGAG	1 cut(s)	1639
SmiMI	CAYNNNNRTG	3 cut(s)	480, 501, 1395
SmlI	CTYRAG	6 cut(s)	705, 1049, 1639, 1766, 2130, 2159
SmoI	CTYRAG	6 cut(s)	705, 1049, 1639, 1766, 2130, 2159
SspDI	GGCGCC	1 cut(s)	2067
SspI	AATATT	2 cut(s)	391, 901
SspMI	CTAG	7 cut(s)	336, 512, 542, 1037, 1196, 1302, 1368
SstI	GAGCTC	1 cut(s)	2131
StyD4I	CCNGG	3 cut(s)	414, 1105, 2252
StyI	CCWWGG	2 cut(s)	1671, 2013
TaaI	ACNGT	4 cut(s)	95, 969, 1099, 1461
TaiI	ACGT	4 cut(s)	1380, 1591, 1626, 2024
TatI	WGTACW	1 cut(s)	1323
TauI	GCSGC	7 cut(s)	1752, 1818, 1892, 1916, 1950, 2012, 2068
TfiI	GAWTC	5 cut(s)	523, 853, 1229, 1372, 2104
Tru1I	TTAA	6 cut(s)	351, 606, 1211, 2160, 2235, 2244
Tru9I	TTAA	6 cut(s)	351, 606, 1211, 2160, 2235, 2244
TscAI	CASTG	3 cut(s)	493, 1466, 1664
TseFI	GTSAC	4 cut(s)	473, 1305, 1589, 1664
Tsp45I	GTSAC	4 cut(s)	473, 1305, 1589, 1664
TspDTI	ATGAA	6 cut(s)	281, 443, 628, 645, 1137, 2006
TspRI	CASTG	3 cut(s)	493, 1466, 1664
Van91I	CCANNNNNTGG	1 cut(s)	1909
Vha464I	CTTAAG	1 cut(s)	2159
VspI	ATTAAT	2 cut(s)	351, 1211
XagI	CCTNNNNNAGG	1 cut(s)	2201
XapI	RAATTY	9 cut(s)	229, 244, 263, 515, 634, 663, 749, 1154, 1809
XceI	RCATGY	1 cut(s)	500
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2056
XhoI	CTCGAG	1 cut(s)	1639
XmnI	GAANNNNTTC	2 cut(s)	466, 935
XspI	CTAG	7 cut(s)	336, 512, 542, 1037, 1196, 1302, 1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.