Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004578

Physical Location & Seq

Genomic Coordinates Forward (+)

177581 .. 184362

Gene Structure 6782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00076270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGTCAGCGTCTCTTGCAGCAATACTTGGAGGTGCTGCAGGAGCCGTGGCATTGGTGGGGATAATTATCATACTTATCGGGTTCTGTCTTCGCAATAGGAGTGTTTCGAGAACTTCTGAGACAGGTTCTTCTGATCCATCTGTTCAAGTGGGAAGACATGGTGGGGTTGAGTTGTCAATACGAGAAACAAGGCGTTTTCAGATGGAAGAATTGTCTCTGGCCACAAAAAATTTTAGTGATACAAATTTGATTGGGGTAGGAAAATTTGGGGAGGTGTATATGGGTTTTCTTCATGACGGGATGCTTGTAGCCATCAAAAAGCGATCTGGATTACCTTGTCAGGAGTTTATTAATGAGGTAAACTATCTCTCAGCTATTCAGCATCGGAATATTGTTACTCTGTTGGGCTACTGCCAGGAAAATAATCTGCAGTTTCTTGTGTATGAGTATATTCATAGTGGAAGTGTTTCGAGTCACTTATATGGCACTGGTCAGCATGTTCGTGAAAAGCTAGAATTCAAGAATCGACTATCAATAGCTCTAGGGGCAGCTAAAGGCTTGGCTTACCTTCACTCTTTGAGTCCTCGTCTGGTGCATAAGGACTTTAAAACAGCCAATGTTCTTGTAGATGAAAATTTCATTGCTAAGGTTGCAGATGCAGGAATTCACAATTTCTTGGGAAAAGATATGGCAGGCCCATCTTCTCAAGTGATTACTGATGAGATATTCCTTTCTCCAGAGGTAAGAGAATTTAGACGATTTTCTGAAAAAAGTGATGTATATAGCTTTGGGGTCTTCCTTATGGAGTTGGTAAGTGGCAGAGAAGCAGCAAAATTGACATCTTCTGACTCGAATCAGAACATTTTTGAATGGGTGCAAAATATCCAAGATGATGGCAATATTTCCAGCATCATCGATGAGAGATTGGGGAATAGCTTCACAGCTGAAGCTATGGAAAAGTTGATACAGTTGATAATAAGATGTGTAGAAGCTTCGAGTGAAAGGCGACCAGCGATGAGCTATGTGGTAATGGAACTAGAGGGGATACTTGAGAAAGAGATGAGCTTGACAACAATCATGGGGGAAGGAACCTCGACTGTGATCCCAGGAAGAACATCAACGTCGGAGGGCAGCCCTGCTAGGTCACCCTTGTCCCACGAGTACAGCCTCGCCGTCCAAAGCACTTCCTACAATGAGATTTGGTCTAGGATTCACGTCCTCCACAGCAACCAACAACAACAACAACAACAACATGAGGATGGGGATGAGGAAGACCAACTGGTATTGGAGCGAGTGCTTCAGCCCAACCGACAGTGCGTGGAAGAGGCCCTCCGCCACGCCGAGTCCAACTCCCTCACTGTTCTCGTCTCCGACTACTTCCGCCACAGCGAGGACGCCACCCATCTCTGTCTGCTCCTCCACCGCAGCGTCTATCGAGCACGTCACCTTTACGCCCCTCTCCATCAACTGCTCGACGTTTTCGAACCAGACTCGAGCCTCAACCAATCTCAGTGCAGTCACGCCTTGGACATCTTCCAACAATTCGACCGCCACGACAACCCCTTCCCCGCCGCCGACTCCCACAACTTCGACGACACGCGCCGCCTCTTCAACGACCTCAAGCAGCAGCTCGATGGCCGCCTCCGCGCCTCCCGCTCCAAAATTCGCCGCATTCGCCGAGCCAATGTCGCGTCCACTATATGCCTCATTGGAACTGCCGTGGGAGTAGTGGCTTCTGCGGCCGCAATCACAGCCCACGCTCTGGCGGCGTTTGTTGTGGCGGGGCCTTTGTGCTGCAGCGGCAGCAGAGCGAGTGCGAGTGCGACGACAAACAAGGAGGTCGCGCATATGAAACAAGTGGATGCTGCGGCCAAGGGGACGTGTGTGCTGAACAATGATCTGGCGACCATTGACCGGCTGGCGCGGCGCCTACATACGGCGGTGGAGGGCGACAAGCTTCTGATTCGGCTGGGATTGGAGAGGGGAGCTCAGGACAAGCATCCCATTCAGGAGGTGCTTAAGCAGCTGCGCAAGAGCCACCCCAATTTCCTCCACCTTGTCAACGAACTTGATCAACATATATGCCTCTGCTTTAACACCGTTAACAGGGCCAGGAGGCTGCTTCTCCAAGAGATCTACAATCTCCAAACAGAGGCAGCCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

721

Amino Acids

80.04

Weight (kDa)

6.36

Isoelectric Point (pI)

44.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	80 - 342	9.3e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	82 - 346	1.4e-42	Protein tyrosine and serine/threonine kinase
DUF677	PF05055	448 - 712	1.1e-13	Protein of unknown function (DUF677)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004578)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19250 AT3G19330 AT3G19330 AT3G19330 AT3G19330
fragaria_vesca	FvH4_6g54380 FvH4_6g54381
malus_domestica	MD09G1001900.v1.1 MD09G1002000.v1.1 MD17G1006100.v1.1 MD17G1006200.v1.1
prunus_persica	Prupe.3G314200_v2.0.a1 Prupe.3G314300_v2.0.a1
pyrus_communis	pycom111g00150 pycom17g00160
rosa_chinensis	RchiOBHm_Chr2g0176601 RchiOBHm_Chr2g0176611
rosa_laevigata	RLG00000022428
rosa_multiflora	Rmu_co8463679.1_g000001 Rmu_sc0001417.1_g000013 Rmu_sc0039568.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076270
rosa_rugosa	Rorug02G0596300
rosa_samantha	Rh2AG674400 Rh2BG685500 Rh2CG648700 Rh2CG648800 Rh2DG699600 Rh2DG699700
rosa_wichuraiana	Rw2G055320 Rw2G055330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2030
AccB1I	GGYRCC	1 cut(s)	1926
AccB7I	CCANNNNNTGG	1 cut(s)	1762
AccBSI	CCGCTC	1 cut(s)	1656
AccII	CGCG	5 cut(s)	1600, 1647, 1691, 1844, 1924
AclWI	GGATC	2 cut(s)	128, 1096
AcoI	YGGCCR	4 cut(s)	219, 1636, 1740, 1869
AcsI	RAATTY	8 cut(s)	229, 244, 263, 515, 634, 663, 749, 1662
AcuI	CTGAAG	2 cut(s)	966, 1283
AcyI	GRCGYC	2 cut(s)	1395, 1927
AfaI	GTAC	1 cut(s)	1163
AfiI	CCNNNNNNNGG	6 cut(s)	1390, 1762, 1914, 1936, 2106, 2152
AflII	CTTAAG	1 cut(s)	2018
AflIII	ACRYGT	1 cut(s)	1880
AgsI	TTSAA	4 cut(s)	146, 520, 869, 1612
AjiI	CACGTC	3 cut(s)	1216, 1442, 1881
AjnI	CCWGG	3 cut(s)	414, 1105, 2111
Alw21I	GWGCWC	2 cut(s)	1441, 1990
Alw26I	GTCTC	4 cut(s)	15, 113, 219, 1372
AlwI	GGATC	2 cut(s)	128, 1096
Ama87I	CYCGRG	1 cut(s)	1492
AoxI	GGCC	8 cut(s)	219, 694, 1326, 1636, 1740, 1784, 1869, 2109
ApoI	RAATTY	8 cut(s)	229, 244, 263, 515, 634, 663, 749, 1662
AseI	ATTAAT	1 cut(s)	351
Asp700I	GAANNNNTTC	2 cut(s)	466, 935
AspLEI	GCGC	6 cut(s)	1602, 1649, 1846, 1924, 1929, 2031
AspS9I	GGNCC	4 cut(s)	695, 1327, 1784, 2109
AsuHPI	GGTGA	2 cut(s)	1137, 1436
AsuII	TTCGAA	1 cut(s)	1482
AvaI	CYCGRG	1 cut(s)	1492
BalI	TGGCCA	1 cut(s)	221
BanI	GGYRCC	1 cut(s)	1926
BanII	GRGCYC	1 cut(s)	1990
BauI	CACGAG	1 cut(s)	1157
BbsI	GAAGAC	4 cut(s)	80, 160, 787, 1278
Bbv12I	GWGCWC	2 cut(s)	1441, 1990
BccI	CCATC	9 cut(s)	145, 196, 320, 706, 887, 1253, 1410, 1470, 1628
BceAI	ACGGC	4 cut(s)	29, 1157, 1703, 1953
BciT130I	CCWGG	3 cut(s)	416, 1107, 2113
BciVI	GTATCC	1 cut(s)	1038
BclI	TGATCA	1 cut(s)	2071
BcoDI	GTCTC	4 cut(s)	15, 113, 219, 1372
BfaI	CTAG	5 cut(s)	512, 542, 1037, 1140, 1206
BfmI	CTRYAG	3 cut(s)	36, 428, 1795
BfoI	RGCGCY	1 cut(s)	1930
BfrI	CTTAAG	1 cut(s)	2018
BfuI	GTATCC	1 cut(s)	1038
BglII	AGATCT	1 cut(s)	2133
Bme1390I	CCNGG	3 cut(s)	416, 1107, 2113
BmeT110I	CYCGRG	1 cut(s)	1492
BmgBI	CACGTC	3 cut(s)	1216, 1442, 1881
BmgT120I	GGNCC	4 cut(s)	695, 1327, 1784, 2109
BmiI	GGNNCC	4 cut(s)	43, 1090, 1785, 1928
BmrFI	CCNGG	3 cut(s)	416, 1107, 2113
BmsI	GCATC	6 cut(s)	291, 391, 646, 918, 1852, 2008
BpiI	GAAGAC	4 cut(s)	80, 160, 787, 1278
BplI	GAGNNNNNCTC	4 cut(s)	1334, 1366, 1972, 2004
BpmI	CTGGAG	1 cut(s)	720
Bpu10I	CCTNAGC	2 cut(s)	645, 1989
Bpu14I	TTCGAA	1 cut(s)	1482
BpuEI	CTTGAG	3 cut(s)	690, 1070, 1604
Bsa29I	ATCGAT	1 cut(s)	915
BsaBI	GATNNNNATC	1 cut(s)	65
BsaHI	GRCGYC	2 cut(s)	1395, 1927
BsaJI	CCNNGG	5 cut(s)	45, 1105, 1524, 1719, 1872
Bsc4I	CCNNNNNNNGG	6 cut(s)	1390, 1762, 1914, 1936, 2106, 2152
Bse118I	RCCGGY	1 cut(s)	1914
Bse1I	ACTGG	2 cut(s)	493, 1284
Bse3DI	GCAATG	1 cut(s)	639
Bse8I	GATNNNNATC	1 cut(s)	65
BseBI	CCWGG	3 cut(s)	416, 1107, 2113
BseCI	ATCGAT	1 cut(s)	915
BseDI	CCNNGG	5 cut(s)	45, 1105, 1524, 1719, 1872
BseGI	GGATG	5 cut(s)	306, 1264, 1270, 1867, 1999
BseJI	GATNNNNATC	1 cut(s)	65
BseLI	CCNNNNNNNGG	6 cut(s)	1390, 1762, 1914, 1936, 2106, 2152
BseMI	GCAATG	1 cut(s)	639
BseMII	CTCAG	4 cut(s)	108, 384, 1523, 2003
BseNI	ACTGG	2 cut(s)	493, 1284
BseRI	GAGGAG	1 cut(s)	1406
BseX3I	CGGCCG	1 cut(s)	1740
BseYI	CCCAGC	1 cut(s)	1969
BsgI	GTGCAG	1 cut(s)	1534
Bsh1236I	CGCG	5 cut(s)	1600, 1647, 1691, 1844, 1924
Bsh1285I	CGRYCG	2 cut(s)	1549, 1743
BshFI	GGCC	8 cut(s)	221, 696, 1328, 1638, 1742, 1786, 1871, 2111
BshNI	GGYRCC	1 cut(s)	1926
BshVI	ATCGAT	1 cut(s)	915
BsiEI	CGRYCG	2 cut(s)	1549, 1743
BsiHKAI	GWGCWC	2 cut(s)	1441, 1990
BsiHKCI	CYCGRG	1 cut(s)	1492
BsiSI	CCGG	1 cut(s)	1915
BslFI	GGGAC	2 cut(s)	1138, 1891
BslI	CCNNNNNNNGG	6 cut(s)	1390, 1762, 1914, 1936, 2106, 2152
BsmAI	GTCTC	4 cut(s)	15, 113, 219, 1372
BsmBI	CGTCTC	2 cut(s)	15, 1372
BsmFI	GGGAC	2 cut(s)	1138, 1891
BsmI	GAATGC	1 cut(s)	1671
BsnI	GGCC	8 cut(s)	221, 696, 1328, 1638, 1742, 1786, 1871, 2111
BsoBI	CYCGRG	1 cut(s)	1492
Bsp119I	TTCGAA	1 cut(s)	1482
Bsp1286I	GDGCHC	2 cut(s)	1441, 1990
Bsp143I	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
BspANI	GGCC	8 cut(s)	221, 696, 1328, 1638, 1742, 1786, 1871, 2111
BspCNI	CTCAG	4 cut(s)	109, 383, 1522, 2002
BspDI	ATCGAT	1 cut(s)	915
BspFNI	CGCG	5 cut(s)	1600, 1647, 1691, 1844, 1924
BspHI	TCATGA	1 cut(s)	292
BspLI	GGNNCC	4 cut(s)	43, 1090, 1785, 1928
BspMAI	CTGCAG	3 cut(s)	40, 432, 1799
BspPI	GGATC	2 cut(s)	128, 1096
BspT104I	TTCGAA	1 cut(s)	1482
BspT107I	GGYRCC	1 cut(s)	1926
BspTI	CTTAAG	1 cut(s)	2018
BsrBI	CCGCTC	1 cut(s)	1656
BsrDI	GCAATG	1 cut(s)	639
BsrFI	RCCGGY	1 cut(s)	1914
BsrI	ACTGG	2 cut(s)	493, 1284
BssAI	RCCGGY	1 cut(s)	1914
BssECI	CCNNGG	5 cut(s)	45, 1105, 1524, 1719, 1872
BssMI	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
BssNI	GRCGYC	2 cut(s)	1395, 1927
BssSI	CACGAG	1 cut(s)	1157
BssT1I	CCWWGG	2 cut(s)	1524, 1872
Bst2BI	CACGAG	1 cut(s)	1157
Bst2UI	CCWGG	3 cut(s)	416, 1107, 2113
Bst4CI	ACNGT	5 cut(s)	969, 1099, 1314, 1360, 2101
Bst6I	CTCTTC	2 cut(s)	1317, 1613
BstACI	GRCGYC	2 cut(s)	1395, 1927
BstAFI	CTTAAG	1 cut(s)	2018
BstBI	TTCGAA	1 cut(s)	1482
BstC8I	GCNNGC	3 cut(s)	694, 1920, 2161
BstDEI	CTNAG	5 cut(s)	117, 370, 645, 1509, 1989
BstDSI	CCRYGG	2 cut(s)	45, 1719
BstEII	GGTNACC	1 cut(s)	1143
BstF5I	GGATG	5 cut(s)	306, 1264, 1270, 1867, 1999
BstFNI	CGCG	5 cut(s)	1600, 1647, 1691, 1844, 1924
BstH2I	RGCGCY	1 cut(s)	1930
BstHHI	GCGC	6 cut(s)	1602, 1649, 1846, 1924, 1929, 2031
BstKTI	GATC	6 cut(s)	136, 326, 1104, 1900, 2074, 2136
BstMAI	GTCTC	4 cut(s)	15, 113, 219, 1372
BstMBI	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
BstMCI	CGRYCG	2 cut(s)	1549, 1743
BstNI	CCWGG	3 cut(s)	416, 1107, 2113
BstNSI	RCATGY	1 cut(s)	500
BstPI	GGTNACC	1 cut(s)	1143
BstSCI	CCNGG	3 cut(s)	414, 1105, 2111
BstSFI	CTRYAG	3 cut(s)	36, 428, 1795
BstUI	CGCG	5 cut(s)	1600, 1647, 1691, 1844, 1924
BstV2I	GAAGAC	4 cut(s)	80, 160, 787, 1278
BstX2I	RGATCY	1 cut(s)	2133
BstXI	CCANNNNNNTGG	1 cut(s)	893
BstYI	RGATCY	1 cut(s)	2133
BstZI	CGGCCG	1 cut(s)	1740
Bsu15I	ATCGAT	1 cut(s)	915
BsuI	GTATCC	1 cut(s)	1038
BsuRI	GGCC	8 cut(s)	221, 696, 1328, 1638, 1742, 1786, 1871, 2111
BsuTUI	ATCGAT	1 cut(s)	915
BtgI	CCRYGG	2 cut(s)	45, 1719
BtgZI	GCGATG	1 cut(s)	1028
BtrI	CACGTC	3 cut(s)	1216, 1442, 1881
BtsCI	GGATG	5 cut(s)	306, 1264, 1270, 1867, 1999
BtsIMutI	CAGTG	4 cut(s)	486, 1319, 1356, 1517
Cac8I	GCNNGC	3 cut(s)	694, 1920, 2161
CciI	TCATGA	1 cut(s)	292
CciNI	GCGGCCGC	1 cut(s)	1740
CfoI	GCGC	6 cut(s)	1602, 1649, 1846, 1924, 1929, 2031
Cfr10I	RCCGGY	1 cut(s)	1914
Cfr13I	GGNCC	4 cut(s)	695, 1327, 1784, 2109
ClaI	ATCGAT	1 cut(s)	915
CseI	GACGC	3 cut(s)	1403, 1417, 1680
Csp6I	GTAC	1 cut(s)	1162
CviAII	CATG	5 cut(s)	158, 293, 497, 1078, 1253
CviQI	GTAC	1 cut(s)	1162
DdeI	CTNAG	5 cut(s)	117, 370, 645, 1509, 1989
DinI	GGCGCC	1 cut(s)	1928
DpnI	GATC	6 cut(s)	135, 325, 1103, 1899, 2073, 2135
DpnII	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
DraI	TTTAAA	1 cut(s)	607
EaeI	YGGCCR	4 cut(s)	219, 1636, 1740, 1869
EagI	CGGCCG	1 cut(s)	1740
Eam1104I	CTCTTC	2 cut(s)	1317, 1613
EarI	CTCTTC	2 cut(s)	1317, 1613
EciI	GGCGGA	2 cut(s)	1322, 1370
Ecl136II	GAGCTC	1 cut(s)	1988
EclXI	CGGCCG	1 cut(s)	1740
Eco130I	CCWWGG	2 cut(s)	1524, 1872
Eco24I	GRGCYC	1 cut(s)	1990
Eco52I	CGGCCG	1 cut(s)	1740
Eco53kI	GAGCTC	1 cut(s)	1988
Eco57I	CTGAAG	2 cut(s)	966, 1283
Eco88I	CYCGRG	1 cut(s)	1492
Eco91I	GGTNACC	1 cut(s)	1143
EcoICRI	GAGCTC	1 cut(s)	1988
EcoO109I	RGGNCCY	2 cut(s)	1327, 1784
EcoO65I	GGTNACC	1 cut(s)	1143
EcoRI	GAATTC	2 cut(s)	515, 663
EcoRII	CCWGG	3 cut(s)	414, 1105, 2111
EcoT14I	CCWWGG	2 cut(s)	1524, 1872
EcoT38I	GRGCYC	1 cut(s)	1990
EgeI	GGCGCC	1 cut(s)	1928
EheI	GGCGCC	1 cut(s)	1928
ErhI	CCWWGG	2 cut(s)	1524, 1872
Esp3I	CGTCTC	2 cut(s)	15, 1372
FaeI	CATG	5 cut(s)	161, 296, 500, 1081, 1256
FaqI	GGGAC	2 cut(s)	1138, 1891
FatI	CATG	5 cut(s)	157, 292, 496, 1077, 1252
FauI	CCCGC	3 cut(s)	1576, 1661, 1774
FauNDI	CATATG	1 cut(s)	1848
FbaI	TGATCA	1 cut(s)	2071
FokI	GGATG	5 cut(s)	313, 1271, 1277, 1874, 1986
FriOI	GRGCYC	1 cut(s)	1990
FspBI	CTAG	5 cut(s)	512, 542, 1037, 1140, 1206
FspI	TGCGCA	1 cut(s)	2030
GlaI	GCGC	6 cut(s)	1601, 1648, 1845, 1923, 1928, 2030
GsaI	CCCAGC	1 cut(s)	1973
GsuI	CTGGAG	1 cut(s)	720
HaeII	RGCGCY	1 cut(s)	1930
HaeIII	GGCC	8 cut(s)	221, 696, 1328, 1638, 1742, 1786, 1871, 2111
HapII	CCGG	1 cut(s)	1915
HgaI	GACGC	3 cut(s)	1403, 1417, 1680
HhaI	GCGC	6 cut(s)	1602, 1649, 1846, 1924, 1929, 2031
Hin1I	GRCGYC	2 cut(s)	1395, 1927
Hin1II	CATG	5 cut(s)	161, 296, 500, 1081, 1256
Hin6I	GCGC	6 cut(s)	1600, 1647, 1844, 1922, 1927, 2029
HinP1I	GCGC	6 cut(s)	1600, 1647, 1844, 1922, 1927, 2029
HincII	GTYRAC	2 cut(s)	2062, 2104
HindII	GTYRAC	2 cut(s)	2062, 2104
HindIII	AAGCTT	2 cut(s)	990, 1955
HpaI	GTTAAC	1 cut(s)	2104
HpaII	CCGG	1 cut(s)	1915
HphI	GGTGA	2 cut(s)	1137, 1436
Hpy166II	GTNNAC	4 cut(s)	361, 1695, 2062, 2104
Hpy188III	TCNNGA	9 cut(s)	108, 293, 327, 341, 503, 520, 737, 1991, 2009
Hpy8I	GTNNAC	4 cut(s)	361, 1695, 2062, 2104
Hpy99I	CGWCG	4 cut(s)	1126, 1478, 1595, 1828
HpyAV	CCTTC	3 cut(s)	578, 1079, 1573
HpyCH4III	ACNGT	5 cut(s)	969, 1099, 1314, 1360, 2101
HpyCH4IV	ACGT	5 cut(s)	1121, 1215, 1441, 1476, 1880
HpyCH4V	TGCA	9 cut(s)	17, 38, 430, 595, 653, 659, 877, 1515, 1797
HpyF3I	CTNAG	5 cut(s)	117, 370, 645, 1509, 1989
HpySE526I	ACGT	5 cut(s)	1121, 1215, 1441, 1476, 1880
Hsp92I	GRCGYC	2 cut(s)	1395, 1927
Hsp92II	CATG	5 cut(s)	161, 296, 500, 1081, 1256
HspAI	GCGC	6 cut(s)	1600, 1647, 1844, 1922, 1927, 2029
KasI	GGCGCC	1 cut(s)	1926
Ksp22I	TGATCA	1 cut(s)	2071
KspAI	GTTAAC	1 cut(s)	2104
Kzo9I	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
LmnI	GCTCC	5 cut(s)	41, 1288, 1419, 1661, 1985
LweI	GCATC	6 cut(s)	291, 391, 646, 918, 1852, 2008
MaeI	CTAG	5 cut(s)	512, 542, 1037, 1140, 1206
MaeII	ACGT	5 cut(s)	1121, 1215, 1441, 1476, 1880
MaeIII	GTNAC	5 cut(s)	394, 473, 1143, 1442, 1517
MalI	GATC	6 cut(s)	135, 325, 1103, 1899, 2073, 2135
MbiI	CCGCTC	1 cut(s)	1656
MboI	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
MflI	RGATCY	1 cut(s)	2133
MhlI	GDGCHC	2 cut(s)	1441, 1990
MlsI	TGGCCA	1 cut(s)	221
MluNI	TGGCCA	1 cut(s)	221
Mly113I	GGCGCC	1 cut(s)	1927
MlyI	GAGTC	6 cut(s)	481, 589, 842, 1352, 1484, 1571
MmeI	TCCRAC	4 cut(s)	1104, 1371, 1395, 1561
Mox20I	TGGCCA	1 cut(s)	221
MroXI	GAANNNNTTC	2 cut(s)	466, 935
MscI	TGGCCA	1 cut(s)	221
MseI	TTAA	5 cut(s)	351, 606, 2019, 2094, 2103
MslI	CAYNNNNRTG	3 cut(s)	480, 501, 1257
Msp20I	TGGCCA	1 cut(s)	221
MspA1I	CMGCKG	4 cut(s)	944, 1800, 2026, 2163
MspCI	CTTAAG	1 cut(s)	2018
MspI	CCGG	1 cut(s)	1915
MspR9I	CCNGG	3 cut(s)	416, 1107, 2113
MteI	GCGCNGCGC	1 cut(s)	1925
Mva1269I	GAATGC	1 cut(s)	1671
MvaI	CCWGG	3 cut(s)	416, 1107, 2113
MvnI	CGCG	5 cut(s)	1600, 1647, 1691, 1844, 1924
NarI	GGCGCC	1 cut(s)	1927
NdeI	CATATG	1 cut(s)	1848
NdeII	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
NlaIII	CATG	5 cut(s)	161, 296, 500, 1081, 1256
NlaIV	GGNNCC	4 cut(s)	43, 1090, 1785, 1928
NmeAIII	GCCGAG	2 cut(s)	1366, 1703
NmuCI	GTSAC	4 cut(s)	473, 1143, 1442, 1517
NotI	GCGGCCGC	1 cut(s)	1740
NsbI	TGCGCA	1 cut(s)	2030
NspI	RCATGY	1 cut(s)	500
NspV	TTCGAA	1 cut(s)	1482
PaeR7I	CTCGAG	1 cut(s)	1492
PagI	TCATGA	1 cut(s)	292
PcsI	WCGNNNNNNNCGW	2 cut(s)	1479, 1551
PctI	GAATGC	1 cut(s)	1671
PdmI	GAANNNNTTC	2 cut(s)	466, 935
PfeI	GAWTC	4 cut(s)	523, 853, 1210, 1963
PflMI	CCANNNNNTGG	1 cut(s)	1762
PleI	GAGTC	6 cut(s)	480, 588, 842, 1351, 1484, 1571
PluTI	GGCGCC	1 cut(s)	1930
PpsI	GAGTC	6 cut(s)	480, 588, 842, 1351, 1484, 1571
PshBI	ATTAAT	1 cut(s)	351
Psp124BI	GAGCTC	1 cut(s)	1990
Psp6I	CCWGG	3 cut(s)	414, 1105, 2111
PspEI	GGTNACC	1 cut(s)	1143
PspFI	CCCAGC	1 cut(s)	1969
PspGI	CCWGG	3 cut(s)	414, 1105, 2111
PspN4I	GGNNCC	4 cut(s)	43, 1090, 1785, 1928
PspPI	GGNCC	4 cut(s)	695, 1327, 1784, 2109
PspXI	VCTCGAGB	1 cut(s)	1492
PstI	CTGCAG	3 cut(s)	40, 432, 1799
PsuI	RGATCY	1 cut(s)	2133
PvuII	CAGCTG	3 cut(s)	944, 2026, 2163
RsaI	GTAC	1 cut(s)	1163
RsaNI	GTAC	1 cut(s)	1162
RseI	CAYNNNNRTG	3 cut(s)	480, 501, 1257
SacI	GAGCTC	1 cut(s)	1990
SaqAI	TTAA	5 cut(s)	351, 606, 2019, 2094, 2103
Sau3AI	GATC	6 cut(s)	133, 323, 1101, 1897, 2071, 2133
Sau96I	GGNCC	4 cut(s)	695, 1327, 1784, 2109
SchI	GAGTC	6 cut(s)	481, 589, 842, 1352, 1484, 1571
ScrFI	CCNGG	3 cut(s)	416, 1107, 2113
SduI	GDGCHC	2 cut(s)	1441, 1990
SfaNI	GCATC	6 cut(s)	291, 391, 646, 918, 1852, 2008
SfcI	CTRYAG	3 cut(s)	36, 428, 1795
SfoI	GGCGCC	1 cut(s)	1928
Sfr274I	CTCGAG	1 cut(s)	1492
SfuI	TTCGAA	1 cut(s)	1482
SlaI	CTCGAG	1 cut(s)	1492
SmiMI	CAYNNNNRTG	3 cut(s)	480, 501, 1257
SmlI	CTYRAG	5 cut(s)	705, 1049, 1492, 1619, 2018
SmoI	CTYRAG	5 cut(s)	705, 1049, 1492, 1619, 2018
SspDI	GGCGCC	1 cut(s)	1926
SspI	AATATT	2 cut(s)	391, 901
SspMI	CTAG	5 cut(s)	512, 542, 1037, 1140, 1206
SstI	GAGCTC	1 cut(s)	1990
StyD4I	CCNGG	3 cut(s)	414, 1105, 2111
StyI	CCWWGG	2 cut(s)	1524, 1872
TaaI	ACNGT	5 cut(s)	969, 1099, 1314, 1360, 2101
TaiI	ACGT	5 cut(s)	1124, 1218, 1444, 1479, 1883
TatI	WGTACW	1 cut(s)	1161
TfiI	GAWTC	4 cut(s)	523, 853, 1210, 1963
Tru1I	TTAA	5 cut(s)	351, 606, 2019, 2094, 2103
Tru9I	TTAA	5 cut(s)	351, 606, 2019, 2094, 2103
TscAI	CASTG	4 cut(s)	493, 1319, 1363, 1517
TseFI	GTSAC	4 cut(s)	473, 1143, 1442, 1517
Tsp45I	GTSAC	4 cut(s)	473, 1143, 1442, 1517
TspDTI	ATGAA	5 cut(s)	281, 443, 628, 645, 1865
TspRI	CASTG	4 cut(s)	493, 1319, 1363, 1517
Van91I	CCANNNNNTGG	1 cut(s)	1762
Vha464I	CTTAAG	1 cut(s)	2018
VspI	ATTAAT	1 cut(s)	351
XapI	RAATTY	8 cut(s)	229, 244, 263, 515, 634, 663, 749, 1662
XceI	RCATGY	1 cut(s)	500
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1915
XhoI	CTCGAG	1 cut(s)	1492
XmnI	GAANNNNTTC	2 cut(s)	466, 935
XspI	CTAG	5 cut(s)	512, 542, 1037, 1140, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.