Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002769

Physical Location & Seq

Genomic Coordinates Reverse (-)

65717603 .. 65723770

Gene Structure 6168 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3717 bp

ATGGGAGGTTCTTGGGAAGTGTCAGCTTCAGGAGGCTGTTCAAGAAAAAGAAGGCGGCTTAGACTCTTTAGTTGTGGAAGATGGATCAAACTGGACTACTGGAGCATGGGGCAAAGGCAGTTCTGTTTGGGCCGTGCTCTTTTAAGGAGAAGTCAGCGGATGGTTGAATTTCTGAGCAGTGGAGCTGTTGAGAATCATATTTCTGCAGCTACTGCTGCTTTGTGTGGCCTAAGAGAAAGAGGACCTTCTGTTCTCTTTGATTCTGAGAGTTTGAGTTTTCGGTTTCTGATTCATCCTACTTCATGCATTAATCACGCATTGACCATTTTCCTTGACATAGTTCTTCTTGTGGTGCTCTTGTTCAGTATGTTTATCAAGTCATCAAAAAGAGTTCATGTTCCAGCACGATTTCTAGGCTTTTCGAGTTGGCAAATAGTCTCGGCCATTTTCAATGGCGCTCTTGGATTTGTGTACTTGTGCTTCGGAGCCTGGAATTTAGAAGAGGAGCTGAGGAATACACGTACTGCTTTGCCTTTGAATTGGTGGTTACTTGGTCTCTTTCAAGGCCTCACATGGTTGCTTTTGAGCTTAACTCTAAGCATCAGGGCGAAGCAACTGCCAAGACAACCTTCAAGAGTGATGTGCATCCTGGCTTTTTTGTTTTCTGGAGTTCTCTTTGCTCTATCGCTCTTCACAGTCATTTTCAGAAATGAAATGTCGGTTAAGATAGTACTAGATATCCTAACTTTTCCAGGAGCAGCATTGTTGCTGCTATGTGTTTTCAAGGGGTATAAGTATGAAGATGGTGATGAGATCATCAGTGACGATGGCCTTTATGCCCCTCTCAATGGTGACTCCAATGGCATTAGTAAAGGTAATGATCATGCAACCCCATTTAGCAAAGCTGGATTGTTAAGTAAAATGTCATTTTGGTGGTTAAATTCATTGATGAAAAGAGGTAGGGAGAAAACTCTGGAGGATGAAGATATACCGAAGTTGCGCAAGGAAGATAGAGCAGAAAATTGCTATGCGATGTTCTTGGAGCAACTAAGCAAGCAGAAACAAATTGAGCCATCTTCCCAGCCATCAGTATTAAAGACTATAATCCTATGCCACCGGAAGGAGATTTTACTATCTGGTTTCTTTGCTTTGCTGAAGATACTCACTATCTGTGCTGGTCCTTTGCTTCTCAATGCCTTCATTTTGGTTGCAGAGGGAAATGAAAGTTTCGAGCATGAAGGTTATCTGTTAGCCGGAGCACTTTTTGTTTCAAAAACCATTGAATCCTTGTCACAAAGGCAGTGGTACTTCAGGTGCAGGCTTATTGGTTTGAAAGTTAGGTCTTTGCTGACAGCAGCCATTTACAAAAAGCAATTAAGATTATCTAATGCTGCTAAGTTGACACACTCAGGTGGTGAGATCATGAATTATGTTACTGTGGATGCTTATAGGATTGGAGAGTTTCCATTTTGGTTCCATAAGACTTGGACTACTAGCGTCCAGCTCTGTTTTTCTTTGGTAATTTTTTTCCGTGCAGTTGGCCTAGCTACATTTGCAGCCTTGGTGGTGATACTTTTGGGTGTGATTTGCAATGCTCCAGTTGCTAAGCTACAACATAAGTTCCAGAGTAAGCTTATGAAGGCTCAAGATGAAAGGCTCAAGGCTAGTTCTGAGGCTCTAGTGAACATGAAGGTCTTAAAGTTATATGCATGGGAAACACATTTCAAGAAGGCAATAGAAAAGTTAAGGAAGGAGGAGCACAAATGGTTATCTGCAATGCTGTTAAGAAGAGCATATAGTACTTATCTCTTTTGGTCAACTCCTGTTTTGGTCTCTACTGCAACATTTGGGGCGTGCTATTTTCTCAAAATTCCGTTACATGCAAACAATGTTTTCACTTTTATCTCTACTTTGAGACTTGTTCAGGACCCCATTCAAACCATACCTGATGTTATTGCGGTTGTCATTCAAGCCAAGGTTGCATTTGGTCGTATTGTGAAATTCCTTGAGGCACCTGAGCTGCAAACTTCAAATGTCCGGAAGTGCAACATGAAGAATGTAGCTAACTCCATTGAAATTAAGTCAGCTAATTTTTCATGGGAAGAGAATTTATCGAAGTCCATACTGAGAAATATAAATTTAGAGGTTAGACCTGGTGAAAAGGTGGCTATATGTGGTGAAGTCGGCTCAGGCAAGTCAAGCCTTCTAGCTGCAATTCTTGGAGAAATTCCAAATGTGCAAGGAAATATTCAAGTTTATGGGAAGATTGCCTATGTTTCTCAAACAGCATGGATCCAGTCAGGAACTATACAAGAAAATATTCTCTTTGGTTCTTGTATGGATAGTCAGAGATATCGAGAGACGCTTGAGAGATGCTCACTAGTAAAGGACCTTGAGCTGCTTCCCTACGGTGACCTTACTGAAATAGGAGAGAGAGGGGTGAATCTAAGTGGAGGTCAGAAGCAGCGGATCCAACTTGCACGCGCTCTCTATCAGGATGCTGATATATATCTATTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTATTTAATGAATATGTAATGGAAGCACTTTCAGGCAAGACAGTACTACTTGTGACCCATCAAGTTGATTTCCTGCCTGCATTTGATTTCGTTTTGTTGATGATGGATGGGGAGATCCTACAAGCAGCTCCTTATCAACATCTATTGGCTTTAAGCCAAGAATTCCAGAACCTTGTCAATGCACACAAAGAAACTGCTGGTTCCGAAAGGCTTTCAGATGTCACTTCTGCTCAAAAATCTGGAATATCATCTAGAGAGATTAAGAAGAGCTATGTTGAGAAGCCATTAAAAGAAAATAAAGTTGACCAATTGATTAAACTTGAAGAGAGAGAAACAGGTGACACAGGTTTTAAGCCATACATACTGTATCTGAAGCAGAACAAAGGGTTCCTGTACTTCTCAATTGCCGTTTGTCTACACTTCACTTCCATTATGAGTCAGATTGCACAGAACTCTTGGATGGCTACTAATGTTGATAATCCGAGTATTAGCACATTGCGGTTGCTTGTGGTTTACTTATCGATTGGATTCTCCGCAACATTTATTTTTCTGTTTAGATCTCTTGCAGCAGTTGTCGGGGGCCTTGAGACATCAAAGTCTTTGTTCTCACAACTACTAAACTCCCTTTTTCGTGCACCCATGTCATTTTATGACTCAACACCACTGGGAAGGATACTTAGTCGGGTTTCATCTGATCTGAGTATCACAGATCTTGATATTCCATTCAGCATAGTATTTGCTTGTGGAGTTACCATGAATGCCTATTGCAATCTTGGGGTATTGACTGTTGTTACCTGGCAAGTCCTGTTTGTCTCCATCCCAATGGTCTGTGTCGCAATTCAGCTACAGAAGTACTATTTTTCTACTGCAAAAGCGTTGATGAGGATCAATGGAACAACTAAGTCCTTTGTAGCAAACCATCTCGCAGAGTCTGTCTCAGGAGCCATTACCATAAGAGCTTTCAATGAAGAAGAGCGCTTCTCGGCAAAGAACTTTCACCTCATTGACACAAATGCTAGTCCTTATTTCCACAATTTTTCTGCAAATGAGTGGTTAATTCAACGATTAGGGATGATCAGCGCGGTGGTTCTTGCCTCTGCAGCACTTTGTATGGTTTTGCTTCCTCATGGAACTTTTACCTCTGGTAAGCTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1238

Amino Acids

138.76

Weight (kDa)

9.13

Isoelectric Point (pI)

36.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABCC10_N	PF24358	90 - 266	1.8e-71	ABCC10 N-terminal domain
ABC_membrane	PF00664	377 - 644	3.2e-24	ABC transporter transmembrane region
ABC_tran	PF00005	709 - 843	6.3e-23	ABC transporter
ABC_membrane	PF00664	984 - 1237	2e-24	ABC transporter transmembrane region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59140
fragaria_vesca	FvH4_3g44221 FvH4_3g44230 FvH4_3g44230 FvH4_7g30860 FvH4_7g30860 FvH4_7g30860 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870 FvH4_7g30870
malus_domestica	MD01G1213600.v1.1
prunus_persica	Prupe.2G305800_v2.0.a1 Prupe.2G305800_v2.0.a1
pyrus_communis	pycom01g22440 pycom07g25750
rosa_chinensis	RchiOBHm_Chr1g0379791 RchiOBHm_Chr1g0379831 RchiOBHm_Chr1g0379841
rosa_laevigata	RLG00000026355 RLG00000026356 RLG00000026359 RLG00000026360
rosa_multiflora	Rmu_sc0014259.1_g000008 Rmu_sc0014259.1_g000011
rosa_roxburghii	Rroxscaffold_4G00279900 Rroxscaffold_4G00279910
rosa_rugosa	Rorug01G0415300
rosa_samantha	Rh1AG438800 Rh1AG439300 Rh1AG439400 Rh1BG395300 Rh1BG395400 Rh1DG426200 Rh1DG426300
rosa_wichuraiana	Rw1G038220 Rw1G038240 Rw1G038250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3154
Acc16I	TGCGCA	1 cut(s)	1001
AccB1I	GGYRCC	1 cut(s)	2011
AccI	GTMKAC	1 cut(s)	2974
AccII	CGCG	2 cut(s)	2484, 3641
AccIII	TCCGGA	1 cut(s)	2037
AciI	CCGC	7 cut(s)	55, 157, 1958, 2467, 3058, 3093, 3641
AclWI	GGATC	8 cut(s)	92, 2287, 2300, 2464, 2477, 2516, 2668, 3452
AcoI	YGGCCR	1 cut(s)	441
AcsI	RAATTY	9 cut(s)	167, 493, 940, 1869, 2000, 2107, 2137, 2226, 2720
AcuI	CTGAAG	4 cut(s)	12, 1175, 1294, 2951
AfaI	GTAC	8 cut(s)	473, 523, 732, 1307, 1801, 2604, 2954, 3413
AfeI	AGCGCT	1 cut(s)	3536
AfiI	CCNNNNNNNGG	2 cut(s)	848, 1120
AflIII	ACRYGT	1 cut(s)	518
AhlI	ACTAGT	1 cut(s)	2380
AjnI	CCWGG	5 cut(s)	488, 648, 751, 2152, 3353
AjuI	GAANNNNNNNTTGG	2 cut(s)	613, 645
AleI	CACNNNNGTG	1 cut(s)	1410
AloI	GAACNNNNNNTCC	2 cut(s)	234, 266
Alw21I	GWGCWC	5 cut(s)	139, 357, 1261, 1761, 3196
Alw26I	GTCTC	8 cut(s)	442, 560, 1837, 1909, 2354, 3140, 3376, 3499
Alw44I	GTGCAC	1 cut(s)	3192
AlwI	GGATC	8 cut(s)	92, 2287, 2300, 2464, 2477, 2516, 2668, 3452
AlwNI	CAGNNNCTG	2 cut(s)	212, 3491
Aor13HI	TCCGGA	1 cut(s)	2037
Aor51HI	AGCGCT	1 cut(s)	3536
AoxI	GGCC	7 cut(s)	130, 226, 441, 565, 829, 1540, 3139
ApaLI	GTGCAC	1 cut(s)	3192
ApoI	RAATTY	9 cut(s)	167, 493, 940, 1869, 2000, 2107, 2137, 2226, 2720
AseI	ATTAAT	1 cut(s)	309
Asp700I	GAANNNNTTC	1 cut(s)	2319
AspLEI	GCGC	5 cut(s)	458, 1002, 2486, 3537, 3641
AspS9I	GGNCC	6 cut(s)	130, 242, 1178, 1927, 2389, 3139
AvaII	GGWCC	4 cut(s)	242, 1178, 1927, 2389
BaeGI	GKGCMC	1 cut(s)	3196
BamHI	GGATCC	2 cut(s)	2292, 2469
BanI	GGYRCC	1 cut(s)	2011
BarI	GAAGNNNNNNTAC	2 cut(s)	464, 496
Bbv12I	GWGCWC	5 cut(s)	139, 357, 1261, 1761, 3196
BbvCI	CCTCAGC	1 cut(s)	509
BceAI	ACGGC	2 cut(s)	117, 2951
BcgI	CGANNNNNNTGC	2 cut(s)	598, 632
BciT130I	CCWGG	5 cut(s)	490, 650, 753, 2154, 3355
BciVI	GTATCC	1 cut(s)	3225
BclI	TGATCA	2 cut(s)	880, 3633
BcoDI	GTCTC	8 cut(s)	442, 560, 1837, 1909, 2354, 3140, 3376, 3499
BcuI	ACTAGT	1 cut(s)	2380
BfmI	CTRYAG	3 cut(s)	204, 3404, 3657
BfoI	RGCGCY	2 cut(s)	459, 3538
BfuI	GTATCC	1 cut(s)	3225
BglII	AGATCT	2 cut(s)	3116, 3268
BlpI	GCTNAGC	1 cut(s)	1605
BmcAI	AGTACT	4 cut(s)	732, 1801, 2604, 3413
Bme1390I	CCNGG	5 cut(s)	490, 650, 753, 2154, 3355
Bme18I	GGWCC	4 cut(s)	242, 1178, 1927, 2389
BmgT120I	GGNCC	6 cut(s)	130, 242, 1178, 1927, 2389, 3139
BmrFI	CCNGG	5 cut(s)	490, 650, 753, 2154, 3355
BmrI	ACTGGG	1 cut(s)	3233
BmsI	GCATC	6 cut(s)	609, 654, 1432, 2363, 2488, 2530
BmuI	ACTGGG	1 cut(s)	3233
BplI	GAGNNNNNCTC	8 cut(s)	577, 609, 2360, 2392, 3479, 3511, 3524, 3556
BpmI	CTGGAG	4 cut(s)	121, 687, 995, 1581
Bpu10I	CCTNAGC	3 cut(s)	509, 2016, 2188
Bpu1102I	GCTNAGC	1 cut(s)	1605
BpuEI	CTTGAG	6 cut(s)	1629, 1643, 2027, 2387, 2414, 3164
Bsa29I	ATCGAT	1 cut(s)	3080
BsaAI	YACGTR	1 cut(s)	521
BsaBI	GATNNNNATC	3 cut(s)	644, 2508, 3443
BsaI	GGTCTC	2 cut(s)	560, 1837
BsaJI	CCNNGG	2 cut(s)	1560, 1974
BsaWI	WCCGGW	2 cut(s)	1116, 2037
Bsc4I	CCNNNNNNNGG	2 cut(s)	848, 1120
Bse1I	ACTGG	5 cut(s)	96, 104, 1598, 2296, 3228
Bse3DI	GCAATG	3 cut(s)	1597, 1782, 3053
Bse8I	GATNNNNATC	3 cut(s)	644, 2508, 3443
BseAI	TCCGGA	1 cut(s)	2037
BseBI	CCWGG	5 cut(s)	490, 650, 753, 2154, 3355
BseCI	ATCGAT	1 cut(s)	3080
BseDI	CCNNGG	2 cut(s)	1560, 1974
BseJI	GATNNNNATC	3 cut(s)	644, 2508, 3443
BseLI	CCNNNNNNNGG	2 cut(s)	848, 1120
BseMI	GCAATG	3 cut(s)	1597, 1782, 3053
BseNI	ACTGG	5 cut(s)	96, 104, 1598, 2296, 3228
BseRI	GAGGAG	2 cut(s)	518, 1769
BseSI	GKGCMC	1 cut(s)	3196
BseYI	CCCAGC	1 cut(s)	1080
BsgI	GTGCAG	2 cut(s)	1336, 1554
Bsh1236I	CGCG	2 cut(s)	2484, 3641
BshFI	GGCC	7 cut(s)	132, 228, 443, 567, 831, 1542, 3141
BshNI	GGYRCC	1 cut(s)	2011
BshVI	ATCGAT	1 cut(s)	3080
BsiHKAI	GWGCWC	5 cut(s)	139, 357, 1261, 1761, 3196
BsiSI	CCGG	3 cut(s)	1117, 1254, 2038
BslI	CCNNNNNNNGG	2 cut(s)	848, 1120
BsmAI	GTCTC	8 cut(s)	442, 560, 1837, 1909, 2354, 3140, 3376, 3499
BsmBI	CGTCTC	1 cut(s)	2354
BsmI	GAATGC	1 cut(s)	3322
BsnI	GGCC	7 cut(s)	132, 228, 443, 567, 831, 1542, 3141
Bso31I	GGTCTC	2 cut(s)	560, 1837
Bsp1286I	GDGCHC	5 cut(s)	139, 357, 1261, 1761, 3196
Bsp13I	TCCGGA	1 cut(s)	2037
Bsp1720I	GCTNAGC	1 cut(s)	1605
BspACI	CCGC	7 cut(s)	55, 157, 1958, 2467, 3058, 3093, 3641
BspANI	GGCC	7 cut(s)	132, 228, 443, 567, 831, 1542, 3141
BspDI	ATCGAT	1 cut(s)	3080
BspEI	TCCGGA	1 cut(s)	2037
BspFNI	CGCG	2 cut(s)	2484, 3641
BspHI	TCATGA	1 cut(s)	1422
BspMAI	CTGCAG	2 cut(s)	208, 3661
BspPI	GGATC	8 cut(s)	92, 2287, 2300, 2464, 2477, 2516, 2668, 3452
BspQI	GCTCTTC	4 cut(s)	695, 1783, 2819, 3525
BspT107I	GGYRCC	1 cut(s)	2011
BspTNI	GGTCTC	2 cut(s)	560, 1837
BsrDI	GCAATG	3 cut(s)	1597, 1782, 3053
BsrI	ACTGG	5 cut(s)	96, 104, 1598, 2296, 3228
BssECI	CCNNGG	2 cut(s)	1560, 1974
BssT1I	CCWWGG	2 cut(s)	1560, 1974
Bst2UI	CCWGG	5 cut(s)	490, 650, 753, 2154, 3355
Bst4CI	ACNGT	6 cut(s)	697, 1438, 2411, 2602, 2925, 3346
Bst6I	CTCTTC	7 cut(s)	495, 695, 1783, 2097, 2819, 2877, 3525
BstAPI	GCANNNNNTGC	2 cut(s)	212, 2549
BstBAI	YACGTR	1 cut(s)	521
BstC8I	GCNNGC	5 cut(s)	1055, 1319, 1855, 2482, 2637
BstEII	GGTNACC	1 cut(s)	2411
BstFNI	CGCG	2 cut(s)	2484, 3641
BstH2I	RGCGCY	2 cut(s)	459, 3538
BstHHI	GCGC	5 cut(s)	458, 1002, 2486, 3537, 3641
BstMAI	GTCTC	8 cut(s)	442, 560, 1837, 1909, 2354, 3140, 3376, 3499
BstMWI	GCNNNNNNNGC	9 cut(s)	212, 215, 1553, 1601, 1979, 2199, 2540, 2549, 3659
BstNI	CCWGG	5 cut(s)	490, 650, 753, 2154, 3355
BstNSI	RCATGY	1 cut(s)	1883
BstPI	GGTNACC	1 cut(s)	2411
BstSCI	CCNGG	5 cut(s)	488, 648, 751, 2152, 3353
BstSFI	CTRYAG	3 cut(s)	204, 3404, 3657
BstSLI	GKGCMC	1 cut(s)	3196
BstUI	CGCG	2 cut(s)	2484, 3641
BstX2I	RGATCY	5 cut(s)	2292, 2469, 2673, 3116, 3268
BstXI	CCANNNNNNTGG	1 cut(s)	3382
BstYI	RGATCY	5 cut(s)	2292, 2469, 2673, 3116, 3268
Bsu15I	ATCGAT	1 cut(s)	3080
BsuI	GTATCC	1 cut(s)	3225
BsuRI	GGCC	7 cut(s)	132, 228, 443, 567, 831, 1542, 3141
BsuTUI	ATCGAT	1 cut(s)	3080
BtgZI	GCGATG	1 cut(s)	1046
BtsI	GCAGTG	2 cut(s)	184, 1307
BtsIMutI	CAGTG	5 cut(s)	184, 826, 1307, 2536, 3221
Cac8I	GCNNGC	5 cut(s)	1055, 1319, 1855, 2482, 2637
CaiI	CAGNNNCTG	2 cut(s)	212, 3491
CciI	TCATGA	1 cut(s)	1422
CfoI	GCGC	5 cut(s)	458, 1002, 2486, 3537, 3641
Cfr13I	GGNCC	6 cut(s)	130, 242, 1178, 1927, 2389, 3139
ClaI	ATCGAT	1 cut(s)	3080
CseI	GACGC	2 cut(s)	1486, 2371
CsiI	ACCWGGT	1 cut(s)	2152
Csp6I	GTAC	8 cut(s)	472, 522, 731, 1306, 1800, 2603, 2953, 3412
CspCI	CAANNNNNGTGG	2 cut(s)	1283, 1318
CviQI	GTAC	8 cut(s)	472, 522, 731, 1306, 1800, 2603, 2953, 3412
DrdI	GACNNNNNNGTC	1 cut(s)	3154
DseDI	GACNNNNNNGTC	1 cut(s)	3154
EaeI	YGGCCR	1 cut(s)	441
Eam1104I	CTCTTC	7 cut(s)	495, 695, 1783, 2097, 2819, 2877, 3525
EarI	CTCTTC	7 cut(s)	495, 695, 1783, 2097, 2819, 2877, 3525
Eco130I	CCWWGG	2 cut(s)	1560, 1974
Eco147I	AGGCCT	1 cut(s)	567
Eco31I	GGTCTC	2 cut(s)	560, 1837
Eco32I	GATATC	2 cut(s)	739, 2354
Eco47I	GGWCC	4 cut(s)	242, 1178, 1927, 2389
Eco47III	AGCGCT	1 cut(s)	3536
Eco57I	CTGAAG	4 cut(s)	12, 1175, 1294, 2951
Eco91I	GGTNACC	1 cut(s)	2411
EcoO109I	RGGNCCY	4 cut(s)	242, 1927, 2389, 3139
EcoO65I	GGTNACC	1 cut(s)	2411
EcoRI	GAATTC	1 cut(s)	2720
EcoRII	CCWGG	5 cut(s)	488, 648, 751, 2152, 3353
EcoRV	GATATC	2 cut(s)	739, 2354
EcoT14I	CCWWGG	2 cut(s)	1560, 1974
EcoT22I	ATGCAT	2 cut(s)	308, 1711
ErhI	CCWWGG	2 cut(s)	1560, 1974
Esp3I	CGTCTC	1 cut(s)	2354
FalI	AAGNNNNNCTT	4 cut(s)	229, 261, 613, 645
FbaI	TGATCA	2 cut(s)	880, 3633
FblI	GTMKAC	1 cut(s)	2974
FspI	TGCGCA	1 cut(s)	1001
GlaI	GCGC	5 cut(s)	457, 1001, 2485, 3536, 3640
GsaI	CCCAGC	1 cut(s)	1084
GsuI	CTGGAG	4 cut(s)	121, 687, 995, 1581
HaeII	RGCGCY	2 cut(s)	459, 3538
HaeIII	GGCC	7 cut(s)	132, 228, 443, 567, 831, 1542, 3141
HapII	CCGG	3 cut(s)	1117, 1254, 2038
HgaI	GACGC	2 cut(s)	1486, 2371
HhaI	GCGC	5 cut(s)	458, 1002, 2486, 3537, 3641
Hin6I	GCGC	5 cut(s)	456, 1000, 2484, 3535, 3639
HinP1I	GCGC	5 cut(s)	456, 1000, 2484, 3535, 3639
HincII	GTYRAC	3 cut(s)	1401, 1818, 2863
HindII	GTYRAC	3 cut(s)	1401, 1818, 2863
HindIII	AAGCTT	2 cut(s)	1631, 3707
HpaII	CCGG	3 cut(s)	1117, 1254, 2038
Hpy166II	GTNNAC	8 cut(s)	472, 1401, 1684, 1818, 2863, 2975, 3073, 3194
Hpy8I	GTNNAC	8 cut(s)	472, 1401, 1684, 1818, 2863, 2975, 3073, 3194
HpyCH4III	ACNGT	6 cut(s)	697, 1438, 2411, 2602, 2925, 3346
HpyCH4IV	ACGT	1 cut(s)	520
HpyF10VI	GCNNNNNNNGC	9 cut(s)	212, 215, 1553, 1601, 1979, 2199, 2540, 2549, 3659
HpySE526I	ACGT	1 cut(s)	520
HspAI	GCGC	5 cut(s)	456, 1000, 2484, 3535, 3639
Kpn2I	TCCGGA	1 cut(s)	2037
Ksp22I	TGATCA	2 cut(s)	880, 3633
LguI	GCTCTTC	4 cut(s)	695, 1783, 2819, 3525
LweI	GCATC	6 cut(s)	609, 654, 1432, 2363, 2488, 2530
MabI	ACCWGGT	1 cut(s)	2152
MaeII	ACGT	1 cut(s)	520
MfeI	CAATTG	2 cut(s)	2867, 2961
MflI	RGATCY	5 cut(s)	2292, 2469, 2673, 3116, 3268
MhlI	GDGCHC	5 cut(s)	139, 357, 1261, 1761, 3196
MlyI	GAGTC	5 cut(s)	57, 848, 3004, 3206, 3497
MmeI	TCCRAC	1 cut(s)	2497
Mph1103I	ATGCAT	2 cut(s)	308, 1711
MroI	TCCGGA	1 cut(s)	2037
MroXI	GAANNNNTTC	1 cut(s)	2319
MslI	CAYNNNNRTG	3 cut(s)	931, 1410, 3380
MspA1I	CMGCKG	2 cut(s)	157, 2467
MspI	CCGG	3 cut(s)	1117, 1254, 2038
MspR9I	CCNGG	5 cut(s)	490, 650, 753, 2154, 3355
MunI	CAATTG	2 cut(s)	2867, 2961
Mva1269I	GAATGC	1 cut(s)	3322
MvaI	CCWGG	5 cut(s)	490, 650, 753, 2154, 3355
MvnI	CGCG	2 cut(s)	2484, 3641
MwoI	GCNNNNNNNGC	9 cut(s)	212, 215, 1553, 1601, 1979, 2199, 2540, 2549, 3659
NmeAIII	GCCGAG	2 cut(s)	419, 3521
NmuCI	GTSAC	7 cut(s)	821, 851, 1290, 2411, 2611, 2779, 2897
NsbI	TGCGCA	1 cut(s)	1001
NsiI	ATGCAT	2 cut(s)	308, 1711
NspI	RCATGY	1 cut(s)	1883
OliI	CACNNNNGTG	1 cut(s)	1410
PagI	TCATGA	1 cut(s)	1422
PceI	AGGCCT	1 cut(s)	567
PciSI	GCTCTTC	4 cut(s)	695, 1783, 2819, 3525
PctI	GAATGC	1 cut(s)	3322
PdmI	GAANNNNTTC	1 cut(s)	2319
PfeI	GAWTC	6 cut(s)	193, 260, 289, 1283, 2443, 3087
PfoI	TCCNGGA	1 cut(s)	751
PleI	GAGTC	5 cut(s)	57, 848, 3003, 3206, 3496
PpsI	GAGTC	5 cut(s)	57, 848, 3003, 3206, 3496
Ppu21I	YACGTR	1 cut(s)	521
PpuMI	RGGWCCY	3 cut(s)	242, 1927, 2389
PshBI	ATTAAT	1 cut(s)	309
Psp5II	RGGWCCY	3 cut(s)	242, 1927, 2389
Psp6I	CCWGG	5 cut(s)	488, 648, 751, 2152, 3353
PspEI	GGTNACC	1 cut(s)	2411
PspFI	CCCAGC	1 cut(s)	1080
PspGI	CCWGG	5 cut(s)	488, 648, 751, 2152, 3353
PspPI	GGNCC	6 cut(s)	130, 242, 1178, 1927, 2389, 3139
PspPPI	RGGWCCY	3 cut(s)	242, 1927, 2389
PstI	CTGCAG	2 cut(s)	208, 3661
PstNI	CAGNNNCTG	2 cut(s)	212, 3491
PsuI	RGATCY	5 cut(s)	2292, 2469, 2673, 3116, 3268
RsaI	GTAC	8 cut(s)	473, 523, 732, 1307, 1801, 2604, 2954, 3413
RsaNI	GTAC	8 cut(s)	472, 522, 731, 1306, 1800, 2603, 2953, 3412
RseI	CAYNNNNRTG	3 cut(s)	931, 1410, 3380
SapI	GCTCTTC	4 cut(s)	695, 1783, 2819, 3525
Sau96I	GGNCC	6 cut(s)	130, 242, 1178, 1927, 2389, 3139
ScaI	AGTACT	4 cut(s)	732, 1801, 2604, 3413
SchI	GAGTC	5 cut(s)	57, 848, 3004, 3206, 3497
ScrFI	CCNGG	5 cut(s)	490, 650, 753, 2154, 3355
SduI	GDGCHC	5 cut(s)	139, 357, 1261, 1761, 3196
SexAI	ACCWGGT	1 cut(s)	2152
SfaNI	GCATC	6 cut(s)	609, 654, 1432, 2363, 2488, 2530
SfcI	CTRYAG	3 cut(s)	204, 3404, 3657
SinI	GGWCC	4 cut(s)	242, 1178, 1927, 2389
SmiMI	CAYNNNNRTG	3 cut(s)	931, 1410, 3380
SmlI	CTYRAG	6 cut(s)	1644, 1658, 2006, 2366, 2393, 3143
SmoI	CTYRAG	6 cut(s)	1644, 1658, 2006, 2366, 2393, 3143
SpeI	ACTAGT	1 cut(s)	2380
SseBI	AGGCCT	1 cut(s)	567
SsiI	CCGC	7 cut(s)	55, 157, 1958, 2467, 3058, 3093, 3641
SspI	AATATT	2 cut(s)	2248, 2320
StuI	AGGCCT	1 cut(s)	567
StyD4I	CCNGG	5 cut(s)	488, 648, 751, 2152, 3353
StyI	CCWWGG	2 cut(s)	1560, 1974
TaaI	ACNGT	6 cut(s)	697, 1438, 2411, 2602, 2925, 3346
TaiI	ACGT	1 cut(s)	523
TaqI	TCGA	5 cut(s)	422, 1230, 2114, 2356, 3080
TatI	WGTACW	6 cut(s)	471, 730, 1799, 2602, 2952, 3411
TauI	GCSGC	1 cut(s)	58
TfiI	GAWTC	6 cut(s)	193, 260, 289, 1283, 2443, 3087
TscAI	CASTG	5 cut(s)	184, 826, 1307, 2536, 3228
TseFI	GTSAC	7 cut(s)	821, 851, 1290, 2411, 2611, 2779, 2897
Tsp45I	GTSAC	7 cut(s)	821, 851, 1290, 2411, 2611, 2779, 2897
TspGWI	ACGGA	2 cut(s)	1520, 1863
TspRI	CASTG	5 cut(s)	184, 826, 1307, 2536, 3228
VneI	GTGCAC	1 cut(s)	3192
VpaK11BI	GGWCC	4 cut(s)	242, 1178, 1927, 2389
VspI	ATTAAT	1 cut(s)	309
XapI	RAATTY	9 cut(s)	167, 493, 940, 1869, 2000, 2107, 2137, 2226, 2720
XbaI	TCTAGA	1 cut(s)	2810
XceI	RCATGY	1 cut(s)	1883
XmiI	GTMKAC	1 cut(s)	2974
XmnI	GAANNNNTTC	1 cut(s)	2319
ZrmI	AGTACT	4 cut(s)	732, 1801, 2604, 3413
Zsp2I	ATGCAT	2 cut(s)	308, 1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.