exonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342681 RchiOBHm_Chr4g0385031 |
| rosa_laevigata | RLG00000008562 RLG00000014249 RLG00000030660 |
| rosa_multiflora | Rmu_sc0000230.1_g000007 Rmu_sc0003052.1_g000011 Rmu_sc0006159.1_g000013 Rmu_sc0008336.1_g000014 Rmu_sc0010676.1_g000001 Rmu_sc0018406.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00116070 Rroxscaffold_7G00190900 |
| rosa_rugosa | Rorug02G0507600 |
| rosa_samantha | Rh2DG203900 Rh3DG272000 Rh4AG220600 Rh4CG002500 Rh4CG169000 Rh5AG255100 Rh5BG250800 Rh6BG140300 Rh6DG123700 Rh7AG342200 Rh7CG359800 Rh7CG474900 |
| rosa_wichuraiana | Rw2G004640 Rw4G016300 Rw7G002500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 207 |
| AclWI | GGATC | 1 cut(s) | 304 |
| AcuI | CTGAAG | 1 cut(s) | 171 |
| AfaI | GTAC | 1 cut(s) | 65 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AluBI | AGCT | 4 cut(s) | 43, 60, 182, 259 |
| AluI | AGCT | 4 cut(s) | 43, 60, 182, 259 |
| Alw26I | GTCTC | 2 cut(s) | 43, 235 |
| AlwI | GGATC | 1 cut(s) | 304 |
| ApeKI | GCWGC | 2 cut(s) | 179, 182 |
| BbvI | GCAGC | 2 cut(s) | 169, 191 |
| BccI | CCATC | 1 cut(s) | 269 |
| BcoDI | GTCTC | 2 cut(s) | 43, 235 |
| BfaI | CTAG | 1 cut(s) | 104 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BglII | AGATCT | 1 cut(s) | 164 |
| BisI | GCNGC | 2 cut(s) | 180, 183 |
| BlsI | GCNGC | 2 cut(s) | 181, 184 |
| BmsI | GCATC | 1 cut(s) | 24 |
| Bpu10I | CCTNAGC | 1 cut(s) | 11 |
| BpuEI | CTTGAG | 1 cut(s) | 186 |
| BsaI | GGTCTC | 1 cut(s) | 235 |
| BseXI | GCAGC | 2 cut(s) | 169, 191 |
| BslFI | GGGAC | 1 cut(s) | 253 |
| BsmAI | GTCTC | 2 cut(s) | 43, 235 |
| BsmFI | GGGAC | 1 cut(s) | 253 |
| Bso31I | GGTCTC | 1 cut(s) | 235 |
| Bsp143I | GATC | 2 cut(s) | 164, 296 |
| BspMAI | CTGCAG | 1 cut(s) | 187 |
| BspPI | GGATC | 1 cut(s) | 304 |
| BspTNI | GGTCTC | 1 cut(s) | 235 |
| BssMI | GATC | 2 cut(s) | 164, 296 |
| BssNAI | GTATAC | 1 cut(s) | 208 |
| Bst1107I | GTATAC | 1 cut(s) | 208 |
| BstC8I | GCNNGC | 1 cut(s) | 198 |
| BstDEI | CTNAG | 1 cut(s) | 11 |
| BstKTI | GATC | 2 cut(s) | 167, 299 |
| BstMAI | GTCTC | 2 cut(s) | 43, 235 |
| BstMBI | GATC | 2 cut(s) | 164, 296 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 12 |
| BstNSI | RCATGY | 1 cut(s) | 200 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstV1I | GCAGC | 2 cut(s) | 169, 191 |
| BstX2I | RGATCY | 1 cut(s) | 164 |
| BstYI | RGATCY | 1 cut(s) | 164 |
| BstZ17I | GTATAC | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 1 cut(s) | 198 |
| Csp6I | GTAC | 1 cut(s) | 64 |
| CviAII | CATG | 1 cut(s) | 197 |
| CviJI | RGCY | 4 cut(s) | 43, 60, 182, 259 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 60, 182, 259 |
| CviQI | GTAC | 1 cut(s) | 64 |
| DdeI | CTNAG | 1 cut(s) | 11 |
| DpnI | GATC | 2 cut(s) | 166, 298 |
| DpnII | GATC | 2 cut(s) | 164, 296 |
| Eco31I | GGTCTC | 1 cut(s) | 235 |
| Eco57I | CTGAAG | 1 cut(s) | 171 |
| FaeI | CATG | 1 cut(s) | 200 |
| FaiI | YATR | 6 cut(s) | 78, 198, 208, 237, 239, 248 |
| FaqI | GGGAC | 1 cut(s) | 253 |
| FatI | CATG | 1 cut(s) | 196 |
| FauNDI | CATATG | 1 cut(s) | 237 |
| FblI | GTMKAC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 2 cut(s) | 180, 183 |
| Fsp4HI | GCNGC | 2 cut(s) | 180, 183 |
| FspBI | CTAG | 1 cut(s) | 104 |
| GluI | GCNGC | 2 cut(s) | 180, 183 |
| Hin1II | CATG | 1 cut(s) | 200 |
| HindIII | AAGCTT | 2 cut(s) | 41, 58 |
| HinfI | GANTC | 2 cut(s) | 212, 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 208 |
| Hpy188I | TCNGA | 1 cut(s) | 217 |
| Hpy8I | GTNNAC | 1 cut(s) | 208 |
| HpyAV | CCTTC | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 4 cut(s) | 6, 71, 130, 185 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 12 |
| HpyF3I | CTNAG | 1 cut(s) | 11 |
| Hsp92II | CATG | 1 cut(s) | 200 |
| Kzo9I | GATC | 2 cut(s) | 164, 296 |
| LpnPI | CCDG | 4 cut(s) | 162, 175, 206, 318 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 191 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeI | CTAG | 1 cut(s) | 104 |
| MalI | GATC | 2 cut(s) | 166, 298 |
| MboI | GATC | 2 cut(s) | 164, 296 |
| MboII | GAAGA | 2 cut(s) | 92, 164 |
| MflI | RGATCY | 1 cut(s) | 164 |
| MluCI | AATT | 2 cut(s) | 125, 225 |
| MlyI | GAGTC | 2 cut(s) | 206, 275 |
| MseI | TTAA | 1 cut(s) | 337 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 12 |
| NdeI | CATATG | 1 cut(s) | 237 |
| NdeII | GATC | 2 cut(s) | 164, 296 |
| NlaIII | CATG | 1 cut(s) | 200 |
| NspI | RCATGY | 1 cut(s) | 200 |
| PaeI | GCATGC | 1 cut(s) | 200 |
| PkrI | GCNGC | 2 cut(s) | 181, 184 |
| PleI | GAGTC | 2 cut(s) | 206, 274 |
| PpsI | GAGTC | 2 cut(s) | 206, 274 |
| PstI | CTGCAG | 1 cut(s) | 187 |
| PsuI | RGATCY | 1 cut(s) | 164 |
| PvuII | CAGCTG | 1 cut(s) | 182 |
| RsaI | GTAC | 1 cut(s) | 65 |
| RsaNI | GTAC | 1 cut(s) | 64 |
| SaqAI | TTAA | 1 cut(s) | 337 |
| SatI | GCNGC | 2 cut(s) | 180, 183 |
| Sau3AI | GATC | 2 cut(s) | 164, 296 |
| SchI | GAGTC | 2 cut(s) | 206, 275 |
| SetI | ASST | 6 cut(s) | 12, 45, 62, 184, 261, 337 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 1 cut(s) | 201 |
| SmoI | CTYRAG | 1 cut(s) | 201 |
| SphI | GCATGC | 1 cut(s) | 200 |
| Sse9I | AATT | 2 cut(s) | 125, 225 |
| SspMI | CTAG | 1 cut(s) | 104 |
| TasI | AATT | 2 cut(s) | 125, 225 |
| TatI | WGTACW | 1 cut(s) | 63 |
| Tru1I | TTAA | 1 cut(s) | 337 |
| Tru9I | TTAA | 1 cut(s) | 337 |
| TseI | GCWGC | 2 cut(s) | 179, 182 |
| TspDTI | ATGAA | 1 cut(s) | 280 |
| XceI | RCATGY | 1 cut(s) | 200 |
| XmiI | GTMKAC | 1 cut(s) | 207 |
| XspI | CTAG | 1 cut(s) | 104 |