exonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342681 RchiOBHm_Chr4g0385031 |
| rosa_laevigata | RLG00000008562 RLG00000014249 RLG00000030660 |
| rosa_multiflora | Rmu_sc0000230.1_g000007 Rmu_sc0003052.1_g000011 Rmu_sc0006159.1_g000013 Rmu_sc0008336.1_g000014 Rmu_sc0010676.1_g000001 Rmu_sc0018406.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00116070 Rroxscaffold_7G00190900 |
| rosa_rugosa | Rorug02G0507600 |
| rosa_samantha | Rh2DG203900 Rh3DG272000 Rh4AG220600 Rh4CG002500 Rh4CG169000 Rh5AG255100 Rh5BG250800 Rh6BG140300 Rh6DG123700 Rh7AG342200 Rh7CG359800 Rh7CG474900 |
| rosa_wichuraiana | Rw2G004640 Rw4G016300 Rw7G002500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 111 |
| AcuI | CTGAAG | 1 cut(s) | 75 |
| AfaI | GTAC | 1 cut(s) | 234 |
| AgsI | TTSAA | 2 cut(s) | 28, 200 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 177, 209 |
| AluBI | AGCT | 2 cut(s) | 86, 163 |
| AluI | AGCT | 2 cut(s) | 86, 163 |
| Alw26I | GTCTC | 1 cut(s) | 139 |
| ApeKI | GCWGC | 2 cut(s) | 83, 86 |
| BbvI | GCAGC | 2 cut(s) | 73, 95 |
| BccI | CCATC | 1 cut(s) | 173 |
| BcoDI | GTCTC | 1 cut(s) | 139 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BglII | AGATCT | 1 cut(s) | 68 |
| BisI | GCNGC | 2 cut(s) | 84, 87 |
| BlsI | GCNGC | 2 cut(s) | 85, 88 |
| BpuEI | CTTGAG | 1 cut(s) | 90 |
| BsaI | GGTCTC | 1 cut(s) | 139 |
| Bse1I | ACTGG | 1 cut(s) | 230 |
| BseNI | ACTGG | 1 cut(s) | 230 |
| BseXI | GCAGC | 2 cut(s) | 73, 95 |
| BslFI | GGGAC | 1 cut(s) | 157 |
| BsmAI | GTCTC | 1 cut(s) | 139 |
| BsmFI | GGGAC | 1 cut(s) | 157 |
| Bso31I | GGTCTC | 1 cut(s) | 139 |
| Bsp143I | GATC | 1 cut(s) | 68 |
| BspMAI | CTGCAG | 1 cut(s) | 91 |
| BspTNI | GGTCTC | 1 cut(s) | 139 |
| BsrI | ACTGG | 1 cut(s) | 230 |
| BssMI | GATC | 1 cut(s) | 68 |
| BssNAI | GTATAC | 1 cut(s) | 112 |
| Bst1107I | GTATAC | 1 cut(s) | 112 |
| BstC8I | GCNNGC | 1 cut(s) | 102 |
| BstKTI | GATC | 1 cut(s) | 71 |
| BstMAI | GTCTC | 1 cut(s) | 139 |
| BstMBI | GATC | 1 cut(s) | 68 |
| BstNSI | RCATGY | 1 cut(s) | 104 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstV1I | GCAGC | 2 cut(s) | 73, 95 |
| BstX2I | RGATCY | 1 cut(s) | 68 |
| BstYI | RGATCY | 1 cut(s) | 68 |
| BstZ17I | GTATAC | 1 cut(s) | 112 |
| Cac8I | GCNNGC | 1 cut(s) | 102 |
| Csp6I | GTAC | 1 cut(s) | 233 |
| CviAII | CATG | 1 cut(s) | 101 |
| CviJI | RGCY | 3 cut(s) | 14, 86, 163 |
| CviKI_1 | RGCY | 3 cut(s) | 14, 86, 163 |
| CviQI | GTAC | 1 cut(s) | 233 |
| DpnI | GATC | 1 cut(s) | 70 |
| DpnII | GATC | 1 cut(s) | 68 |
| Eco31I | GGTCTC | 1 cut(s) | 139 |
| Eco57I | CTGAAG | 1 cut(s) | 75 |
| FaeI | CATG | 1 cut(s) | 104 |
| FaiI | YATR | 8 cut(s) | 7, 9, 102, 112, 141, 143, 152, 205 |
| FaqI | GGGAC | 1 cut(s) | 157 |
| FatI | CATG | 1 cut(s) | 100 |
| FauNDI | CATATG | 1 cut(s) | 141 |
| FblI | GTMKAC | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 2 cut(s) | 84, 87 |
| Fsp4HI | GCNGC | 2 cut(s) | 84, 87 |
| GluI | GCNGC | 2 cut(s) | 84, 87 |
| Hin1II | CATG | 1 cut(s) | 104 |
| HinfI | GANTC | 3 cut(s) | 116, 170, 200 |
| Hpy166II | GTNNAC | 1 cut(s) | 112 |
| Hpy188I | TCNGA | 2 cut(s) | 77, 121 |
| Hpy8I | GTNNAC | 1 cut(s) | 112 |
| HpyAV | CCTTC | 1 cut(s) | 31 |
| HpyCH4V | TGCA | 2 cut(s) | 34, 89 |
| Hsp92II | CATG | 1 cut(s) | 104 |
| Kzo9I | GATC | 1 cut(s) | 68 |
| LpnPI | CCDG | 4 cut(s) | 66, 79, 110, 221 |
| Lsp1109I | GCAGC | 2 cut(s) | 73, 95 |
| MalI | GATC | 1 cut(s) | 70 |
| MboI | GATC | 1 cut(s) | 68 |
| MboII | GAAGA | 1 cut(s) | 68 |
| MflI | RGATCY | 1 cut(s) | 68 |
| MluCI | AATT | 2 cut(s) | 29, 129 |
| MlyI | GAGTC | 2 cut(s) | 110, 179 |
| MnlI | CCTC | 1 cut(s) | 215 |
| MspA1I | CMGCKG | 1 cut(s) | 86 |
| NdeI | CATATG | 1 cut(s) | 141 |
| NdeII | GATC | 1 cut(s) | 68 |
| NlaIII | CATG | 1 cut(s) | 104 |
| NspI | RCATGY | 1 cut(s) | 104 |
| PaeI | GCATGC | 1 cut(s) | 104 |
| PfeI | GAWTC | 1 cut(s) | 200 |
| PkrI | GCNGC | 2 cut(s) | 85, 88 |
| PleI | GAGTC | 2 cut(s) | 110, 178 |
| PpsI | GAGTC | 2 cut(s) | 110, 178 |
| PstI | CTGCAG | 1 cut(s) | 91 |
| PsuI | RGATCY | 1 cut(s) | 68 |
| PvuII | CAGCTG | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 234 |
| RsaNI | GTAC | 1 cut(s) | 233 |
| SatI | GCNGC | 2 cut(s) | 84, 87 |
| Sau3AI | GATC | 1 cut(s) | 68 |
| SchI | GAGTC | 2 cut(s) | 110, 179 |
| SetI | ASST | 2 cut(s) | 88, 165 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SmlI | CTYRAG | 1 cut(s) | 105 |
| SmoI | CTYRAG | 1 cut(s) | 105 |
| SphI | GCATGC | 1 cut(s) | 104 |
| Sse9I | AATT | 2 cut(s) | 29, 129 |
| TasI | AATT | 2 cut(s) | 29, 129 |
| TatI | WGTACW | 1 cut(s) | 232 |
| TfiI | GAWTC | 1 cut(s) | 200 |
| TseI | GCWGC | 2 cut(s) | 83, 86 |
| XceI | RCATGY | 1 cut(s) | 104 |
| XmiI | GTMKAC | 1 cut(s) | 111 |