exonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0342681 RchiOBHm_Chr4g0385031 |
| rosa_laevigata | RLG00000008562 RLG00000014249 RLG00000030660 |
| rosa_multiflora | Rmu_sc0000230.1_g000007 Rmu_sc0003052.1_g000011 Rmu_sc0006159.1_g000013 Rmu_sc0008336.1_g000014 Rmu_sc0010676.1_g000001 Rmu_sc0018406.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00116070 Rroxscaffold_7G00190900 |
| rosa_rugosa | Rorug02G0507600 |
| rosa_samantha | Rh2DG203900 Rh3DG272000 Rh4AG220600 Rh4CG002500 Rh4CG169000 Rh5AG255100 Rh5BG250800 Rh6BG140300 Rh6DG123700 Rh7AG342200 Rh7CG359800 Rh7CG474900 |
| rosa_wichuraiana | Rw2G004640 Rw4G016300 Rw7G002500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 249 |
| AclWI | GGATC | 1 cut(s) | 346 |
| AcuI | CTGAAG | 1 cut(s) | 213 |
| AgsI | TTSAA | 2 cut(s) | 28, 166 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 315, 347 |
| AluBI | AGCT | 2 cut(s) | 224, 301 |
| AluI | AGCT | 2 cut(s) | 224, 301 |
| Alw21I | GWGCWC | 1 cut(s) | 58 |
| Alw26I | GTCTC | 1 cut(s) | 277 |
| AlwI | GGATC | 1 cut(s) | 346 |
| ApeKI | GCWGC | 2 cut(s) | 221, 224 |
| AspLEI | GCGC | 1 cut(s) | 77 |
| Bbv12I | GWGCWC | 1 cut(s) | 58 |
| BbvI | GCAGC | 2 cut(s) | 211, 233 |
| BccI | CCATC | 1 cut(s) | 311 |
| BcoDI | GTCTC | 1 cut(s) | 277 |
| BfaI | CTAG | 1 cut(s) | 72 |
| BfmI | CTRYAG | 1 cut(s) | 225 |
| BglII | AGATCT | 1 cut(s) | 206 |
| BisI | GCNGC | 2 cut(s) | 222, 225 |
| BlsI | GCNGC | 2 cut(s) | 223, 226 |
| BmsI | GCATC | 1 cut(s) | 118 |
| BpuEI | CTTGAG | 1 cut(s) | 228 |
| BsaI | GGTCTC | 1 cut(s) | 277 |
| BsaJI | CCNNGG | 1 cut(s) | 334 |
| BseDI | CCNNGG | 1 cut(s) | 334 |
| BseXI | GCAGC | 2 cut(s) | 211, 233 |
| BsiHKAI | GWGCWC | 1 cut(s) | 58 |
| BslFI | GGGAC | 1 cut(s) | 295 |
| BsmAI | GTCTC | 1 cut(s) | 277 |
| BsmFI | GGGAC | 1 cut(s) | 295 |
| Bso31I | GGTCTC | 1 cut(s) | 277 |
| Bsp1286I | GDGCHC | 1 cut(s) | 58 |
| Bsp143I | GATC | 2 cut(s) | 206, 338 |
| BspMAI | CTGCAG | 1 cut(s) | 229 |
| BspPI | GGATC | 1 cut(s) | 346 |
| BspTNI | GGTCTC | 1 cut(s) | 277 |
| BssECI | CCNNGG | 1 cut(s) | 334 |
| BssMI | GATC | 2 cut(s) | 206, 338 |
| BssNAI | GTATAC | 1 cut(s) | 250 |
| BssT1I | CCWWGG | 1 cut(s) | 334 |
| Bst1107I | GTATAC | 1 cut(s) | 250 |
| BstC8I | GCNNGC | 1 cut(s) | 240 |
| BstHHI | GCGC | 1 cut(s) | 77 |
| BstKTI | GATC | 2 cut(s) | 209, 341 |
| BstMAI | GTCTC | 1 cut(s) | 277 |
| BstMBI | GATC | 2 cut(s) | 206, 338 |
| BstSFI | CTRYAG | 1 cut(s) | 225 |
| BstV1I | GCAGC | 2 cut(s) | 211, 233 |
| BstX2I | RGATCY | 1 cut(s) | 206 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 98 |
| BstYI | RGATCY | 1 cut(s) | 206 |
| BstZ17I | GTATAC | 1 cut(s) | 250 |
| Cac8I | GCNNGC | 1 cut(s) | 240 |
| CfoI | GCGC | 1 cut(s) | 77 |
| CviJI | RGCY | 4 cut(s) | 88, 152, 224, 301 |
| CviKI_1 | RGCY | 4 cut(s) | 88, 152, 224, 301 |
| DpnI | GATC | 2 cut(s) | 208, 340 |
| DpnII | GATC | 2 cut(s) | 206, 338 |
| Eco130I | CCWWGG | 1 cut(s) | 334 |
| Eco31I | GGTCTC | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 1 cut(s) | 213 |
| EcoT14I | CCWWGG | 1 cut(s) | 334 |
| ErhI | CCWWGG | 1 cut(s) | 334 |
| FaiI | YATR | 5 cut(s) | 21, 250, 279, 281, 290 |
| FaqI | GGGAC | 1 cut(s) | 295 |
| FauNDI | CATATG | 1 cut(s) | 279 |
| FblI | GTMKAC | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 2 cut(s) | 222, 225 |
| Fsp4HI | GCNGC | 2 cut(s) | 222, 225 |
| FspBI | CTAG | 1 cut(s) | 72 |
| GlaI | GCGC | 1 cut(s) | 76 |
| GluI | GCNGC | 2 cut(s) | 222, 225 |
| HhaI | GCGC | 1 cut(s) | 77 |
| Hin6I | GCGC | 1 cut(s) | 75 |
| HinP1I | GCGC | 1 cut(s) | 75 |
| HinfI | GANTC | 1 cut(s) | 308 |
| Hpy166II | GTNNAC | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 3 cut(s) | 138, 215, 259 |
| Hpy8I | GTNNAC | 1 cut(s) | 250 |
| HpyAV | CCTTC | 2 cut(s) | 9, 169 |
| HpyCH4V | TGCA | 2 cut(s) | 172, 227 |
| HspAI | GCGC | 1 cut(s) | 75 |
| Kzo9I | GATC | 2 cut(s) | 206, 338 |
| LmnI | GCTCC | 1 cut(s) | 106 |
| LpnPI | CCDG | 5 cut(s) | 44, 204, 217, 248, 360 |
| Lsp1109I | GCAGC | 2 cut(s) | 211, 233 |
| LweI | GCATC | 1 cut(s) | 118 |
| MaeI | CTAG | 1 cut(s) | 72 |
| MalI | GATC | 2 cut(s) | 208, 340 |
| MboI | GATC | 2 cut(s) | 206, 338 |
| MboII | GAAGA | 3 cut(s) | 131, 206, 355 |
| MflI | RGATCY | 1 cut(s) | 206 |
| MhlI | GDGCHC | 1 cut(s) | 58 |
| MluCI | AATT | 2 cut(s) | 167, 267 |
| MlyI | GAGTC | 1 cut(s) | 317 |
| MmeI | TCCRAC | 1 cut(s) | 79 |
| MnlI | CCTC | 3 cut(s) | 30, 60, 118 |
| MseI | TTAA | 2 cut(s) | 8, 379 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| NdeI | CATATG | 1 cut(s) | 279 |
| NdeII | GATC | 2 cut(s) | 206, 338 |
| PkrI | GCNGC | 2 cut(s) | 223, 226 |
| PleI | GAGTC | 1 cut(s) | 316 |
| PpsI | GAGTC | 1 cut(s) | 316 |
| PstI | CTGCAG | 1 cut(s) | 229 |
| PsuI | RGATCY | 1 cut(s) | 206 |
| PvuII | CAGCTG | 1 cut(s) | 224 |
| SaqAI | TTAA | 2 cut(s) | 8, 379 |
| SatI | GCNGC | 2 cut(s) | 222, 225 |
| Sau3AI | GATC | 2 cut(s) | 206, 338 |
| SchI | GAGTC | 1 cut(s) | 317 |
| SduI | GDGCHC | 1 cut(s) | 58 |
| SetI | ASST | 5 cut(s) | 20, 71, 226, 303, 379 |
| SfaNI | GCATC | 1 cut(s) | 118 |
| SfcI | CTRYAG | 1 cut(s) | 225 |
| SmlI | CTYRAG | 1 cut(s) | 243 |
| SmoI | CTYRAG | 1 cut(s) | 243 |
| Sse9I | AATT | 2 cut(s) | 167, 267 |
| SspMI | CTAG | 1 cut(s) | 72 |
| StyI | CCWWGG | 1 cut(s) | 334 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TasI | AATT | 2 cut(s) | 167, 267 |
| Tru1I | TTAA | 2 cut(s) | 8, 379 |
| Tru9I | TTAA | 2 cut(s) | 8, 379 |
| TseI | GCWGC | 2 cut(s) | 221, 224 |
| XmiI | GTMKAC | 1 cut(s) | 249 |
| XspI | CTAG | 1 cut(s) | 72 |