RchiOBHm_Chr1g0364821

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0003326
Physical Location & Seq
Forward (+)
55910640 .. 55914829
4190 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58950

Sequence Viewer

Length: 2169 bp
ATGTTACATTATTTGCAAATTTCCAGAATTTCACTTGGTAACCAAGTCTTAGTTATGGATAATTCCCAAGTAGATGTAGTTGTGGAGAACGGGAAAGAGAAAGCGGCAAGAAATACAGATTCGAGTAAGAGATGGCCGACGATGAAGGAGATTACAGATCCTAAGGGGCCGTTCTTTCCCAAGTGGAGAATGATATTTATAGTGTCATGTCTGTTTGCTGTACTATTGGATCCTTTGTTCCTCTACATTCCTATGATCAATGATGATGCCAAGTGCATGAGTTTGGATAGAAACTTGAAGATAGCAGCTCCTGTCTTCCGAATGGTCACAGATGTCTTTTACATACTGAATATTATTCTTCAAGTTTATAAATCCAAGAAATGGTTAGCTTTCATCAATGCATTTCGGTCAGGAAGTTGCTCATCTGTATTATCGAACTTGAGGAGTATCTCACCAAGCATAGCTAAGACGATGTGGAAGTCATACATACTAATCGATGTTTTCGCTGTTCTTCCCCTTCCACAGGTAGTAATTCTCATCTTCTTTTCAAAAATGAGGGGCGTGAGATCTTTGAATACAAGGAAGCTTCTGAGCTTTCTTGTTCTGGTGCAATATGTTCCACGGGTCCTTCGCATCTACCTATCGTGCAAGGAACCTAAAAAGTCTTCCAAAGAAGAGATTGCAACATGGGTCAAAGGTGTACTCAACTTCTTTATGTACATCCTTGCCAGTCATGTACTTGGAGCCTGTTGGTACTTTTTTGCTGTTGAAAGACTCACAAATTGTTGGCAACATGCCTGTCAAAATGAAAATAGATGTGTTCCTAGTACTTTTGACTGTCACGATCACAATTCATTGAGAAATACTACATCACTGAATGACTTATGCCCAGTAGATCCACCAAATGCAAAGCTGTTTGATTTTGGTATCTTTCTTGATATCCTTCAGTCTGGCATACTGGGTTCAACAGATTATCCAAAAAAGTTGTCGAACTGTTTCTGGTGGGGCCTGCGAAATCTTAGTTCTCTTGGTTCAAATCTCCAGACCAGTACCAATACATGGGAAAACCTCTTTGCGACTCTAATTTCTATTATCGGCTTGCTACTTTTTCTATATCTTATTGGAAATTTGCAGATGTATATGCAGACGGATGCTGCAATATTAGAGTCGAACAGACACAAGAGGAAAGTCAAAAGGGCTGTGGAAAAGAAAGGTCGAGAGTTAGACTTGTGGTTATTGAAAAATGGCATCCCTAGTAGAAGAAAAAATGAGATGATGGAAAGGGTACAGCAAGAGCTTGCCGAAAGGAGAAATGTTGATGTGGAAAACATTCTCTCTATTCTTCCCGAGGAACTTCAGAGCTATATCAAAAATTTGTTGCCATTGGCTCGGCTAAAGAAAGTACCACTGCTTCAAACTATGGATGAAGAAGTATTGAAAGAAATCAGTGAGTATCTTGAACCCAAAAAATTTGAGATTACTGGGCGGGAATATCTTTCTAGAGATGGGGAACCACTAGAAAAGATGATATTCATAGTTGAGGGAGATCTTGGCGTTGAAAGAAGAAATGTTGCCGGTCGTGACCTTTTATACCCGGGAGACTTCTATGGAGCAGAACTTCTGGAGTGGGTATCAGTATCAAATACCTCTTTTCCCGCCACATTACCCCTATCCATAGATTCTTCTTATGTCACCAACAATGATAGTGTTCTTTTTCTCAAGGCTGACGACTTGAAGAGTGTAGTATCTAAATTCAGGTCGCGTTTTAGCAAGGAGATCACACTTCCATCCAATTTTCAACCGGAAGTTCTGACTTCTTTCCAGCTGACTAGGCTCAAGACAGTGCCAATGTTTCAAGCTACGGACGAAGCCCTGTTAAAAGCAATCACTGAGCGTCTGAAGCCAGTGACCTACACTGATGGGATGTATATAATCAAAAAGGATGAACCACTTCAGTTGATGTTCTTCGTCCTAGCCGGATATGTAGTCACCGAAAGTTATCCTCATTTTGTTGTTCGTATAGGAGAATTTTGTGGACAAGAACTTCTAGATTGGCCATCCACTACCTCATTTCCTATGGAATTTCCCACAGCACTCGAGTCTGCTAGGGCCAATGGTGATGTTAGAGTCCTTGCTCTGATGTTGGGACTGGGTGAGTGTAGTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans Pkinase Pkinase_Tyr cNMP_binding

Protein Analysis

722

Amino Acids

82.65

Weight (kDa)

8.66

Isoelectric Point (pI)

47.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 64 - 383 1.8e-10 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 369
AccB7I CCANNNNNTGG 2 cut(s) 381, 1059
AccII CGCG 1 cut(s) 1762
AciI CCGC 3 cut(s) 104, 1486, 1656
AclWI GGATC 4 cut(s) 152, 224, 237, 890
AcoI YGGCCR 2 cut(s) 134, 2054
AcsI RAATTY 8 cut(s) 18, 27, 1126, 1372, 1469, 1751, 2027, 2081
AcuI CTGAAG 4 cut(s) 929, 1340, 1919, 1937
AfaI GTAC 9 cut(s) 222, 702, 719, 738, 755, 829, 1051, 1287, 1404
AfiI CCNNNNNNNGG 3 cut(s) 381, 523, 1059
AloI GAACNNNNNNTCC 2 cut(s) 221, 253
Alw26I GTCTC 1 cut(s) 1593
AlwI GGATC 4 cut(s) 152, 224, 237, 890
AlwNI CAGNNNCTG 1 cut(s) 311
Ama87I CYCGRG 3 cut(s) 1346, 1594, 2096
AoxI GGCC 5 cut(s) 134, 167, 1006, 2054, 2109
ApeKI GCWGC 2 cut(s) 305, 1154
ApoI RAATTY 8 cut(s) 18, 27, 1126, 1372, 1469, 1751, 2027, 2081
ArsI GACNNNNNNTTYG 2 cut(s) 971, 1003
Asp700I GAANNNNTTC 3 cut(s) 995, 1329, 1950
AspS9I GGNCC 4 cut(s) 167, 625, 1006, 2109
AsuC2I CCSGG 2 cut(s) 1595, 1596
AsuHPI GGTGA 5 cut(s) 444, 1684, 1981, 2129, 2165
AvaI CYCGRG 3 cut(s) 1346, 1594, 2096
AvaII GGWCC 1 cut(s) 625
AxyI CCTNAGG 1 cut(s) 162
BalI TGGCCA 1 cut(s) 2056
BamHI GGATCC 1 cut(s) 229
BarI GAAGNNNNNNTAC 2 cut(s) 1395, 1427
BbsI GAAGAC 2 cut(s) 307, 657
BbvI GCAGC 2 cut(s) 317, 1141
BccI CCATC 6 cut(s) 126, 1270, 1499, 1795, 1913, 2065
BceAI ACGGC 1 cut(s) 154
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 2 cut(s) 1595, 1596
BcoDI GTCTC 1 cut(s) 1593
BfaI CTAG 8 cut(s) 825, 1254, 1500, 1517, 1830, 1973, 2048, 2106
BglII AGATCT 2 cut(s) 566, 1546
BisI GCNGC 3 cut(s) 105, 306, 1155
BlsI GCNGC 3 cut(s) 106, 307, 1156
BmcAI AGTACT 1 cut(s) 829
Bme1390I CCNGG 2 cut(s) 1595, 1596
Bme18I GGWCC 1 cut(s) 625
BmeT110I CYCGRG 3 cut(s) 1346, 1594, 2096
BmgT120I GGNCC 4 cut(s) 167, 625, 1006, 2109
BmiI GGNNCC 7 cut(s) 168, 231, 626, 654, 745, 1007, 1512
BmrFI CCNGG 2 cut(s) 1595, 1596
BmrI ACTGGG 4 cut(s) 884, 968, 1491, 2159
BmsI GCATC 4 cut(s) 256, 642, 1141, 1257
BmuI ACTGGG 4 cut(s) 884, 968, 1491, 2159
BpiI GAAGAC 2 cut(s) 307, 657
BpmI CTGGAG 2 cut(s) 1025, 1643
BpuEI CTTGAG 3 cut(s) 460, 1703, 1820
BpuMI CCSGG 2 cut(s) 1595, 1596
Bsa29I ATCGAT 1 cut(s) 495
BsaJI CCNNGG 3 cut(s) 620, 1347, 1594
BsaWI WCCGGW 1 cut(s) 1801
Bsc4I CCNNNNNNNGG 3 cut(s) 381, 523, 1059
Bse118I RCCGGY 1 cut(s) 1574
Bse1I ACTGG 7 cut(s) 729, 890, 963, 1047, 1486, 1904, 2154
Bse21I CCTNAGG 1 cut(s) 162
BseCI ATCGAT 1 cut(s) 495
BseDI CCNNGG 3 cut(s) 620, 1347, 1594
BseGI GGATG 8 cut(s) 720, 1156, 1248, 1429, 1787, 1929, 1948, 2057
BseLI CCNNNNNNNGG 3 cut(s) 381, 523, 1059
BseMII CTCAG 2 cut(s) 581, 1881
BseNI ACTGG 7 cut(s) 729, 890, 963, 1047, 1486, 1904, 2154
BseRI GAGGAG 1 cut(s) 457
BseXI GCAGC 2 cut(s) 317, 1141
Bsh1236I CGCG 1 cut(s) 1762
Bsh1285I CGRYCG 1 cut(s) 1579
BshFI GGCC 5 cut(s) 136, 169, 1008, 2056, 2111
BshVI ATCGAT 1 cut(s) 495
BsiEI CGRYCG 1 cut(s) 1579
BsiHKCI CYCGRG 3 cut(s) 1346, 1594, 2096
BsiSI CCGG 4 cut(s) 1575, 1595, 1802, 1977
BslFI GGGAC 1 cut(s) 2160
BslI CCNNNNNNNGG 3 cut(s) 381, 523, 1059
BsmAI GTCTC 1 cut(s) 1593
BsmFI GGGAC 1 cut(s) 2160
BsnI GGCC 5 cut(s) 136, 169, 1008, 2056, 2111
BsoBI CYCGRG 3 cut(s) 1346, 1594, 2096
Bsp1407I TGTACA 1 cut(s) 717
Bsp143I GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
BspACI CCGC 3 cut(s) 104, 1486, 1656
BspANI GGCC 5 cut(s) 136, 169, 1008, 2056, 2111
BspCNI CTCAG 2 cut(s) 582, 1882
BspDI ATCGAT 1 cut(s) 495
BspFNI CGCG 1 cut(s) 1762
BspLI GGNNCC 7 cut(s) 168, 231, 626, 654, 745, 1007, 1512
BspPI GGATC 4 cut(s) 152, 224, 237, 890
BsrFI RCCGGY 1 cut(s) 1574
BsrGI TGTACA 1 cut(s) 717
BsrI ACTGG 7 cut(s) 729, 890, 963, 1047, 1486, 1904, 2154
BssAI RCCGGY 1 cut(s) 1574
BssECI CCNNGG 3 cut(s) 620, 1347, 1594
BssMI GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
Bst4CI ACNGT 3 cut(s) 839, 995, 1843
Bst6I CTCTTC 2 cut(s) 669, 1730
BstAUI TGTACA 1 cut(s) 717
BstC8I GCNNGC 3 cut(s) 1010, 1100, 1299
BstDEI CTNAG 6 cut(s) 49, 162, 465, 590, 1019, 1890
BstDSI CCRYGG 1 cut(s) 620
BstEII GGTNACC 1 cut(s) 38
BstENI CCTNNNNNAGG 1 cut(s) 521
BstF5I GGATG 8 cut(s) 720, 1156, 1248, 1429, 1787, 1929, 1948, 2057
BstFNI CGCG 1 cut(s) 1762
BstKTI GATC 8 cut(s) 160, 232, 258, 569, 847, 898, 1549, 1779
BstMAI GTCTC 1 cut(s) 1593
BstMBI GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
BstMCI CGRYCG 1 cut(s) 1579
BstMWI GCNNNNNNNGC 2 cut(s) 1831, 1900
BstNSI RCATGY 1 cut(s) 797
BstPI GGTNACC 1 cut(s) 38
BstSCI CCNGG 2 cut(s) 1593, 1594
BstUI CGCG 1 cut(s) 1762
BstV1I GCAGC 2 cut(s) 317, 1141
BstV2I GAAGAC 2 cut(s) 307, 657
BstX2I RGATCY 5 cut(s) 157, 229, 566, 895, 1546
BstYI RGATCY 5 cut(s) 157, 229, 566, 895, 1546
Bsu15I ATCGAT 1 cut(s) 495
Bsu36I CCTNAGG 1 cut(s) 162
BsuRI GGCC 5 cut(s) 136, 169, 1008, 2056, 2111
BsuTUI ATCGAT 1 cut(s) 495
BtgI CCRYGG 1 cut(s) 620
BtsCI GGATG 8 cut(s) 720, 1156, 1248, 1429, 1787, 1929, 1948, 2057
BtsI GCAGTG 1 cut(s) 1406
BtsIMutI CAGTG 7 cut(s) 872, 1406, 1453, 1848, 1887, 1911, 1914
Cac8I GCNNGC 3 cut(s) 1010, 1100, 1299
CaiI CAGNNNCTG 1 cut(s) 311
Cfr10I RCCGGY 1 cut(s) 1574
Cfr13I GGNCC 4 cut(s) 167, 625, 1006, 2109
Cfr9I CCCGGG 1 cut(s) 1594
ClaI ATCGAT 1 cut(s) 495
CseI GACGC 1 cut(s) 1883
Csp6I GTAC 9 cut(s) 221, 701, 718, 737, 754, 828, 1050, 1286, 1403
CspCI CAANNNNNGTGG 2 cut(s) 1938, 1973
CviAII CATG 6 cut(s) 207, 277, 687, 734, 794, 1059
CviQI GTAC 9 cut(s) 221, 701, 718, 737, 754, 828, 1050, 1286, 1403
DdeI CTNAG 6 cut(s) 49, 162, 465, 590, 1019, 1890
DpnI GATC 8 cut(s) 159, 231, 257, 568, 846, 897, 1548, 1778
DpnII GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
EaeI YGGCCR 2 cut(s) 134, 2054
Eam1104I CTCTTC 2 cut(s) 669, 1730
EarI CTCTTC 2 cut(s) 669, 1730
Eco32I GATATC 1 cut(s) 940
Eco47I GGWCC 1 cut(s) 625
Eco57I CTGAAG 4 cut(s) 929, 1340, 1919, 1937
Eco81I CCTNAGG 1 cut(s) 162
Eco88I CYCGRG 3 cut(s) 1346, 1594, 2096
Eco91I GGTNACC 1 cut(s) 38
EcoNI CCTNNNNNAGG 1 cut(s) 521
EcoO109I RGGNCCY 2 cut(s) 625, 1006
EcoO65I GGTNACC 1 cut(s) 38
EcoRV GATATC 1 cut(s) 940
EcoT22I ATGCAT 1 cut(s) 403
FaeI CATG 6 cut(s) 210, 280, 690, 737, 797, 1062
FaqI GGGAC 1 cut(s) 2160
FatI CATG 6 cut(s) 206, 276, 686, 733, 793, 1058
FauI CCCGC 2 cut(s) 1479, 1663
FbaI TGATCA 1 cut(s) 255
Fnu4HI GCNGC 3 cut(s) 105, 306, 1155
FokI GGATG 8 cut(s) 707, 1163, 1235, 1436, 1774, 1936, 1955, 2044
Fsp4HI GCNGC 3 cut(s) 105, 306, 1155
FspBI CTAG 8 cut(s) 825, 1254, 1500, 1517, 1830, 1973, 2048, 2106
GluI GCNGC 3 cut(s) 105, 306, 1155
GsuI CTGGAG 2 cut(s) 1025, 1643
HaeIII GGCC 5 cut(s) 136, 169, 1008, 2056, 2111
HapII CCGG 4 cut(s) 1575, 1595, 1802, 1977
HgaI GACGC 1 cut(s) 1883
Hin1II CATG 6 cut(s) 210, 280, 690, 737, 797, 1062
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 7 cut(s) 119, 774, 1078, 1166, 1679, 2099, 2127
HpaII CCGG 4 cut(s) 1575, 1595, 1802, 1977
HphI GGTGA 5 cut(s) 444, 1684, 1981, 2129, 2165
Hpy166II GTNNAC 2 cut(s) 701, 2036
Hpy188I TCNGA 6 cut(s) 320, 591, 1359, 1812, 1899, 2139
Hpy8I GTNNAC 2 cut(s) 701, 2036
Hpy99I CGWCG 1 cut(s) 142
HpyAV CCTTC 4 cut(s) 139, 527, 638, 953
HpyCH4III ACNGT 3 cut(s) 839, 995, 1843
HpyF10VI GCNNNNNNNGC 2 cut(s) 1831, 1900
HpyF3I CTNAG 6 cut(s) 49, 162, 465, 590, 1019, 1890
Hsp92II CATG 6 cut(s) 210, 280, 690, 737, 797, 1062
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
LmnI GCTCC 3 cut(s) 313, 743, 1610
Lsp1109I GCAGC 2 cut(s) 317, 1141
LweI GCATC 4 cut(s) 256, 642, 1141, 1257
MaeI CTAG 8 cut(s) 825, 1254, 1500, 1517, 1830, 1973, 2048, 2106
MaeIII GTNAC 8 cut(s) 3, 38, 325, 839, 1580, 1690, 1906, 1987
MalI GATC 8 cut(s) 159, 231, 257, 568, 846, 897, 1548, 1778
MboI GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
MflI RGATCY 5 cut(s) 157, 229, 566, 895, 1546
MlsI TGGCCA 1 cut(s) 2056
MluNI TGGCCA 1 cut(s) 2056
MlyI GAGTC 5 cut(s) 768, 1072, 1175, 2108, 2136
Mox20I TGGCCA 1 cut(s) 2056
Mph1103I ATGCAT 1 cut(s) 403
MroXI GAANNNNTTC 3 cut(s) 995, 1329, 1950
MscI TGGCCA 1 cut(s) 2056
MseI TTAA 1 cut(s) 1877
MslI CAYNNNNRTG 1 cut(s) 251
Msp20I TGGCCA 1 cut(s) 2056
MspA1I CMGCKG 1 cut(s) 1825
MspI CCGG 4 cut(s) 1575, 1595, 1802, 1977
MspR9I CCNGG 2 cut(s) 1595, 1596
MvnI CGCG 1 cut(s) 1762
MwoI GCNNNNNNNGC 2 cut(s) 1831, 1900
NciI CCSGG 2 cut(s) 1595, 1596
NdeII GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
NlaIII CATG 6 cut(s) 210, 280, 690, 737, 797, 1062
NlaIV GGNNCC 7 cut(s) 168, 231, 626, 654, 745, 1007, 1512
NmeAIII GCCGAG 1 cut(s) 1369
NmuCI GTSAC 6 cut(s) 325, 839, 1580, 1690, 1906, 1987
NsiI ATGCAT 1 cut(s) 403
NspI RCATGY 1 cut(s) 797
PaeR7I CTCGAG 1 cut(s) 2096
PdmI GAANNNNTTC 3 cut(s) 995, 1329, 1950
PfeI GAWTC 2 cut(s) 119, 1679
PflMI CCANNNNNTGG 2 cut(s) 381, 1059
PkrI GCNGC 3 cut(s) 106, 307, 1156
PleI GAGTC 5 cut(s) 768, 1072, 1174, 2107, 2135
PpsI GAGTC 5 cut(s) 768, 1072, 1174, 2107, 2135
PpuMI RGGWCCY 1 cut(s) 625
PsiI TTATAA 1 cut(s) 369
Psp5II RGGWCCY 1 cut(s) 625
PspEI GGTNACC 1 cut(s) 38
PspN4I GGNNCC 7 cut(s) 168, 231, 626, 654, 745, 1007, 1512
PspPI GGNCC 4 cut(s) 167, 625, 1006, 2109
PspPPI RGGWCCY 1 cut(s) 625
PspXI VCTCGAGB 1 cut(s) 2096
PstNI CAGNNNCTG 1 cut(s) 311
PsuI RGATCY 5 cut(s) 157, 229, 566, 895, 1546
PvuII CAGCTG 1 cut(s) 1825
RsaI GTAC 9 cut(s) 222, 702, 719, 738, 755, 829, 1051, 1287, 1404
RsaNI GTAC 9 cut(s) 221, 701, 718, 737, 754, 828, 1050, 1286, 1403
RseI CAYNNNNRTG 1 cut(s) 251
SaqAI TTAA 1 cut(s) 1877
SatI GCNGC 3 cut(s) 105, 306, 1155
Sau3AI GATC 8 cut(s) 157, 229, 255, 566, 844, 895, 1546, 1776
Sau96I GGNCC 4 cut(s) 167, 625, 1006, 2109
ScaI AGTACT 1 cut(s) 829
SchI GAGTC 5 cut(s) 768, 1072, 1175, 2108, 2136
ScrFI CCNGG 2 cut(s) 1595, 1596
SfaNI GCATC 4 cut(s) 256, 642, 1141, 1257
Sfr274I CTCGAG 1 cut(s) 2096
SinI GGWCC 1 cut(s) 625
SlaI CTCGAG 1 cut(s) 2096
SmaI CCCGGG 1 cut(s) 1596
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 4 cut(s) 439, 1718, 1835, 2096
SmoI CTYRAG 4 cut(s) 439, 1718, 1835, 2096
SsiI CCGC 3 cut(s) 104, 1486, 1656
SspI AATATT 2 cut(s) 352, 1161
SspMI CTAG 8 cut(s) 825, 1254, 1500, 1517, 1830, 1973, 2048, 2106
StyD4I CCNGG 2 cut(s) 1593, 1594
TaaI ACNGT 3 cut(s) 839, 995, 1843
TaqI TCGA 7 cut(s) 122, 434, 495, 989, 1169, 1216, 2097
TaqII GACCGA 1 cut(s) 396
TatI WGTACW 5 cut(s) 220, 700, 717, 736, 827
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 2 cut(s) 119, 1679
Tru1I TTAA 1 cut(s) 1877
Tru9I TTAA 1 cut(s) 1877
TscAI CASTG 7 cut(s) 879, 1413, 1453, 1848, 1894, 1911, 1921
TseFI GTSAC 6 cut(s) 325, 839, 1580, 1690, 1906, 1987
TseI GCWGC 2 cut(s) 305, 1154
Tsp45I GTSAC 6 cut(s) 325, 839, 1580, 1690, 1906, 1987
TspDTI ATGAA 7 cut(s) 158, 382, 822, 843, 1440, 1522, 1959
TspGWI ACGGA 2 cut(s) 1163, 1877
TspMI CCCGGG 1 cut(s) 1594
TspRI CASTG 7 cut(s) 879, 1413, 1453, 1848, 1894, 1911, 1921
Van91I CCANNNNNTGG 2 cut(s) 381, 1059
VpaK11BI GGWCC 1 cut(s) 625
XagI CCTNNNNNAGG 1 cut(s) 521
XapI RAATTY 8 cut(s) 18, 27, 1126, 1372, 1469, 1751, 2027, 2081
XbaI TCTAGA 2 cut(s) 1499, 2047
XceI RCATGY 1 cut(s) 797
XhoI CTCGAG 1 cut(s) 2096
XmaI CCCGGG 1 cut(s) 1594
XmnI GAANNNNTTC 3 cut(s) 995, 1329, 1950
XspI CTAG 8 cut(s) 825, 1254, 1500, 1517, 1830, 1973, 2048, 2106
ZrmI AGTACT 1 cut(s) 829
Zsp2I ATGCAT 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.