Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55070 AT3G55070 |
| fragaria_vesca | FvH4_7g20680 FvH4_7g20680 FvH4_7g20680 |
| malus_domestica | MD01G1115200.v1.1 MD01G1115600.v1.1 MD07G1183500.v1.1 |
| prunus_persica | Prupe.2G222200_v2.0.a1 Prupe.2G222200_v2.0.a1 Prupe.2G222200_v2.0.a1 |
| pyrus_communis | pycom01g14420 pycom07g17610 |
| rosa_chinensis | RchiOBHm_Chr1g0364711 RchiOBHm_Chr1g0364821 RchiOBHm_Chr1g0364831 |
| rosa_laevigata | RLG00000027464 |
| rosa_multiflora | Rmu_co8292327.1_g000001 Rmu_sc0028465.1_g000001 Rmu_sc0028466.1_g000001 Rmu_ssc0000112.1_g000032 |
| rosa_roxburghii | Rroxscaffold_4G00291710 Rroxscaffold_4G00291720 Rroxscaffold_4G00292120 Rroxscaffold_4G00292130 Rroxscaffold_4G00292150 |
| rosa_rugosa | Rorug01G0318300 Rorug01G0318500 |
| rosa_samantha | Rh1AG327100 Rh1BG288200 Rh1BG288300 Rh1CG304900 Rh1CG305000 Rh1DG319900 |
| rosa_wichuraiana | Rw1G028970 Rw1G028980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 228 |
| Acc16I | TGCGCA | 1 cut(s) | 2328 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 240 |
| AccI | GTMKAC | 1 cut(s) | 1904 |
| AccII | CGCG | 2 cut(s) | 1183, 1938 |
| AciI | CCGC | 3 cut(s) | 907, 1077, 1482 |
| AclWI | GGATC | 4 cut(s) | 11, 83, 96, 1989 |
| AcoI | YGGCCR | 2 cut(s) | 1475, 1629 |
| AcsI | RAATTY | 7 cut(s) | 793, 890, 1172, 1448, 1502, 2462, 2606 |
| AcuI | CTGAAG | 4 cut(s) | 761, 1340, 1358, 2354 |
| AfaI | GTAC | 5 cut(s) | 81, 708, 825, 1719, 2058 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 240, 382, 1780 |
| AflII | CTTAAG | 1 cut(s) | 1256 |
| AjiI | CACGTC | 1 cut(s) | 2577 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 80, 112 |
| Alw26I | GTCTC | 2 cut(s) | 1014, 2028 |
| AlwI | GGATC | 4 cut(s) | 11, 83, 96, 1989 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 170 |
| Ama87I | CYCGRG | 5 cut(s) | 767, 1015, 1517, 2013, 2531 |
| AoxI | GGCC | 4 cut(s) | 1475, 1530, 1629, 2544 |
| ApeKI | GCWGC | 2 cut(s) | 164, 576 |
| ApoI | RAATTY | 7 cut(s) | 793, 890, 1172, 1448, 1502, 2462, 2606 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 750, 1371 |
| AspLEI | GCGC | 1 cut(s) | 2329 |
| AspS9I | GGNCC | 5 cut(s) | 26, 484, 1530, 2017, 2544 |
| AsuC2I | CCSGG | 2 cut(s) | 1016, 1017 |
| AsuHPI | GGTGA | 8 cut(s) | 303, 1105, 1402, 1550, 1588, 2119, 2416, 2564 |
| AvaI | CYCGRG | 5 cut(s) | 767, 1015, 1517, 2013, 2531 |
| AvaII | GGWCC | 3 cut(s) | 26, 484, 2017 |
| AxyI | CCTNAGG | 1 cut(s) | 21 |
| BalI | TGGCCA | 1 cut(s) | 1477 |
| BamHI | GGATCC | 1 cut(s) | 88 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 816, 848 |
| BbsI | GAAGAC | 3 cut(s) | 166, 516, 1575 |
| BbvI | GCAGC | 2 cut(s) | 176, 563 |
| BccI | CCATC | 9 cut(s) | 691, 920, 1216, 1334, 1486, 1904, 1915, 1934, 2348 |
| BceAI | ACGGC | 2 cut(s) | 1616, 1736 |
| BclI | TGATCA | 1 cut(s) | 114 |
| BcnI | CCSGG | 2 cut(s) | 1016, 1017 |
| BcoDI | GTCTC | 2 cut(s) | 1014, 2028 |
| BfrI | CTTAAG | 1 cut(s) | 1256 |
| BglII | AGATCT | 4 cut(s) | 425, 967, 1462, 2249 |
| BisI | GCNGC | 2 cut(s) | 165, 577 |
| BlsI | GCNGC | 2 cut(s) | 166, 578 |
| Bme1390I | CCNGG | 2 cut(s) | 1016, 1017 |
| Bme18I | GGWCC | 3 cut(s) | 26, 484, 2017 |
| BmeT110I | CYCGRG | 5 cut(s) | 767, 1015, 1517, 2013, 2531 |
| BmgBI | CACGTC | 1 cut(s) | 2577 |
| BmgT120I | GGNCC | 5 cut(s) | 26, 484, 1530, 2017, 2544 |
| BmiI | GGNNCC | 7 cut(s) | 27, 90, 485, 513, 933, 1947, 2018 |
| BmrFI | CCNGG | 2 cut(s) | 1016, 1017 |
| BmrI | ACTGGG | 2 cut(s) | 912, 1582 |
| BmsI | GCATC | 7 cut(s) | 115, 501, 563, 679, 2151, 2338, 2501 |
| BmuI | ACTGGG | 2 cut(s) | 912, 1582 |
| BpiI | GAAGAC | 3 cut(s) | 166, 516, 1575 |
| BpmI | CTGGAG | 1 cut(s) | 1064 |
| BpuEI | CTTGAG | 3 cut(s) | 319, 1124, 1681 |
| BpuMI | CCSGG | 2 cut(s) | 1016, 1017 |
| Bsa29I | ATCGAT | 1 cut(s) | 354 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2363 |
| BsaJI | CCNNGG | 5 cut(s) | 479, 768, 1015, 1632, 2282 |
| BsaWI | WCCGGW | 1 cut(s) | 1222 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 240, 382, 1780 |
| Bse118I | RCCGGY | 1 cut(s) | 995 |
| Bse1I | ACTGG | 3 cut(s) | 907, 1325, 1577 |
| Bse21I | CCTNAGG | 1 cut(s) | 21 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2363 |
| BseCI | ATCGAT | 1 cut(s) | 354 |
| BseDI | CCNNGG | 5 cut(s) | 479, 768, 1015, 1632, 2282 |
| BseJI | GATNNNNATC | 1 cut(s) | 2363 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 240, 382, 1780 |
| BseMII | CTCAG | 4 cut(s) | 440, 1302, 2237, 2246 |
| BseNI | ACTGG | 3 cut(s) | 907, 1325, 1577 |
| BseRI | GAGGAG | 2 cut(s) | 316, 1630 |
| BseXI | GCAGC | 2 cut(s) | 176, 563 |
| Bsh1236I | CGCG | 2 cut(s) | 1183, 1938 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1000 |
| BshFI | GGCC | 4 cut(s) | 1477, 1532, 1631, 2546 |
| BshVI | ATCGAT | 1 cut(s) | 354 |
| BsiEI | CGRYCG | 1 cut(s) | 1000 |
| BsiHKCI | CYCGRG | 5 cut(s) | 767, 1015, 1517, 2013, 2531 |
| BsiSI | CCGG | 5 cut(s) | 996, 1016, 1223, 1398, 2412 |
| BslFI | GGGAC | 1 cut(s) | 2030 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 240, 382, 1780 |
| BsmAI | GTCTC | 2 cut(s) | 1014, 2028 |
| BsmFI | GGGAC | 1 cut(s) | 2030 |
| BsnI | GGCC | 4 cut(s) | 1477, 1532, 1631, 2546 |
| BsoBI | CYCGRG | 5 cut(s) | 767, 1015, 1517, 2013, 2531 |
| Bsp1407I | TGTACA | 1 cut(s) | 2056 |
| Bsp143I | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| Bsp68I | TCGCGA | 1 cut(s) | 1938 |
| BspACI | CCGC | 3 cut(s) | 907, 1077, 1482 |
| BspANI | GGCC | 4 cut(s) | 1477, 1532, 1631, 2546 |
| BspCNI | CTCAG | 4 cut(s) | 441, 1303, 2238, 2245 |
| BspDI | ATCGAT | 1 cut(s) | 354 |
| BspFNI | CGCG | 2 cut(s) | 1183, 1938 |
| BspLI | GGNNCC | 7 cut(s) | 27, 90, 485, 513, 933, 1947, 2018 |
| BspPI | GGATC | 4 cut(s) | 11, 83, 96, 1989 |
| BspTI | CTTAAG | 1 cut(s) | 1256 |
| BsrFI | RCCGGY | 1 cut(s) | 995 |
| BsrGI | TGTACA | 1 cut(s) | 2056 |
| BsrI | ACTGG | 3 cut(s) | 907, 1325, 1577 |
| BssAI | RCCGGY | 1 cut(s) | 995 |
| BssECI | CCNNGG | 5 cut(s) | 479, 768, 1015, 1632, 2282 |
| BssMI | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| BssNAI | GTATAC | 1 cut(s) | 1905 |
| Bst1107I | GTATAC | 1 cut(s) | 1905 |
| Bst4CI | ACNGT | 1 cut(s) | 1264 |
| Bst6I | CTCTTC | 4 cut(s) | 528, 1151, 1637, 2165 |
| BstAFI | CTTAAG | 1 cut(s) | 1256 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2324 |
| BstAUI | TGTACA | 1 cut(s) | 2056 |
| BstC8I | GCNNGC | 2 cut(s) | 720, 1629 |
| BstDEI | CTNAG | 9 cut(s) | 21, 324, 449, 516, 1311, 1844, 2184, 2232, 2246 |
| BstDSI | CCRYGG | 2 cut(s) | 479, 1632 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 380 |
| BstFNI | CGCG | 2 cut(s) | 1183, 1938 |
| BstHHI | GCGC | 1 cut(s) | 2329 |
| BstKTI | GATC | 9 cut(s) | 19, 91, 117, 428, 970, 1200, 1465, 1984, 2252 |
| BstMAI | GTCTC | 2 cut(s) | 1014, 2028 |
| BstMBI | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| BstMCI | CGRYCG | 1 cut(s) | 1000 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1252, 1321, 2324, 2335 |
| BstSCI | CCNGG | 2 cut(s) | 1014, 1015 |
| BstUI | CGCG | 2 cut(s) | 1183, 1938 |
| BstV1I | GCAGC | 2 cut(s) | 176, 563 |
| BstV2I | GAAGAC | 3 cut(s) | 166, 516, 1575 |
| BstX2I | RGATCY | 7 cut(s) | 16, 88, 425, 967, 1462, 1981, 2249 |
| BstYI | RGATCY | 7 cut(s) | 16, 88, 425, 967, 1462, 1981, 2249 |
| BstZ17I | GTATAC | 1 cut(s) | 1905 |
| Bsu15I | ATCGAT | 1 cut(s) | 354 |
| Bsu36I | CCTNAGG | 1 cut(s) | 21 |
| BsuRI | GGCC | 4 cut(s) | 1477, 1532, 1631, 2546 |
| BsuTUI | ATCGAT | 1 cut(s) | 354 |
| BtgI | CCRYGG | 2 cut(s) | 479, 1632 |
| BtgZI | GCGATG | 1 cut(s) | 1953 |
| BtrI | CACGTC | 1 cut(s) | 2577 |
| BtsI | GCAGTG | 1 cut(s) | 827 |
| BtsIMutI | CAGTG | 5 cut(s) | 827, 874, 1269, 1332, 1335 |
| BtuMI | TCGCGA | 1 cut(s) | 1938 |
| Cac8I | GCNNGC | 2 cut(s) | 720, 1629 |
| CaiI | CAGNNNCTG | 1 cut(s) | 170 |
| CfoI | GCGC | 1 cut(s) | 2329 |
| Cfr10I | RCCGGY | 1 cut(s) | 995 |
| Cfr13I | GGNCC | 5 cut(s) | 26, 484, 1530, 2017, 2544 |
| Cfr9I | CCCGGG | 1 cut(s) | 1015 |
| ClaI | ATCGAT | 1 cut(s) | 354 |
| CseI | GACGC | 1 cut(s) | 1304 |
| Csp6I | GTAC | 5 cut(s) | 80, 707, 824, 1718, 2057 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1359, 1394 |
| CviAII | CATG | 4 cut(s) | 66, 136, 546, 2155 |
| CviQI | GTAC | 5 cut(s) | 80, 707, 824, 1718, 2057 |
| DdeI | CTNAG | 9 cut(s) | 21, 324, 449, 516, 1311, 1844, 2184, 2232, 2246 |
| DpnI | GATC | 9 cut(s) | 18, 90, 116, 427, 969, 1199, 1464, 1983, 2251 |
| DpnII | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| DraI | TTTAAA | 1 cut(s) | 1672 |
| EaeI | YGGCCR | 2 cut(s) | 1475, 1629 |
| Eam1104I | CTCTTC | 4 cut(s) | 528, 1151, 1637, 2165 |
| EarI | CTCTTC | 4 cut(s) | 528, 1151, 1637, 2165 |
| Eco32I | GATATC | 1 cut(s) | 1681 |
| Eco47I | GGWCC | 3 cut(s) | 26, 484, 2017 |
| Eco57I | CTGAAG | 4 cut(s) | 761, 1340, 1358, 2354 |
| Eco81I | CCTNAGG | 1 cut(s) | 21 |
| Eco88I | CYCGRG | 5 cut(s) | 767, 1015, 1517, 2013, 2531 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 380 |
| EcoO109I | RGGNCCY | 3 cut(s) | 26, 484, 2017 |
| EcoRI | GAATTC | 1 cut(s) | 2462 |
| EcoRV | GATATC | 1 cut(s) | 1681 |
| EcoT22I | ATGCAT | 1 cut(s) | 262 |
| FaeI | CATG | 4 cut(s) | 69, 139, 549, 2158 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2466, 2498 |
| FaqI | GGGAC | 1 cut(s) | 2030 |
| FatI | CATG | 4 cut(s) | 65, 135, 545, 2154 |
| FauI | CCCGC | 2 cut(s) | 900, 1084 |
| FauNDI | CATATG | 1 cut(s) | 1887 |
| FbaI | TGATCA | 1 cut(s) | 114 |
| FblI | GTMKAC | 1 cut(s) | 1904 |
| Fnu4HI | GCNGC | 2 cut(s) | 165, 577 |
| Fsp4HI | GCNGC | 2 cut(s) | 165, 577 |
| FspAI | RTGCGCAY | 1 cut(s) | 2328 |
| FspI | TGCGCA | 1 cut(s) | 2328 |
| GlaI | GCGC | 1 cut(s) | 2328 |
| GluI | GCNGC | 2 cut(s) | 165, 577 |
| GsuI | CTGGAG | 1 cut(s) | 1064 |
| HaeIII | GGCC | 4 cut(s) | 1477, 1532, 1631, 2546 |
| HapII | CCGG | 5 cut(s) | 996, 1016, 1223, 1398, 2412 |
| HgaI | GACGC | 1 cut(s) | 1304 |
| HhaI | GCGC | 1 cut(s) | 2329 |
| Hin1II | CATG | 4 cut(s) | 69, 139, 549, 2158 |
| Hin6I | GCGC | 1 cut(s) | 2327 |
| HinP1I | GCGC | 1 cut(s) | 2327 |
| HincII | GTYRAC | 1 cut(s) | 2262 |
| HindII | GTYRAC | 1 cut(s) | 2262 |
| HindIII | AAGCTT | 1 cut(s) | 443 |
| HinfI | GANTC | 7 cut(s) | 588, 1100, 1520, 1548, 2114, 2534, 2562 |
| HpaII | CCGG | 5 cut(s) | 996, 1016, 1223, 1398, 2412 |
| HphI | GGTGA | 8 cut(s) | 303, 1105, 1402, 1550, 1588, 2119, 2416, 2564 |
| Hpy166II | GTNNAC | 5 cut(s) | 1457, 1883, 1905, 2262, 2471 |
| Hpy8I | GTNNAC | 5 cut(s) | 1457, 1883, 1905, 2262, 2471 |
| HpyAV | CCTTC | 6 cut(s) | 386, 497, 1784, 2024, 2030, 2228 |
| HpyCH4III | ACNGT | 1 cut(s) | 1264 |
| HpyCH4IV | ACGT | 1 cut(s) | 2576 |
| HpyCH4V | TGCA | 8 cut(s) | 135, 260, 469, 507, 542, 566, 579, 2197 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1252, 1321, 2324, 2335 |
| HpyF3I | CTNAG | 9 cut(s) | 21, 324, 449, 516, 1311, 1844, 2184, 2232, 2246 |
| HpySE526I | ACGT | 1 cut(s) | 2576 |
| Hsp92II | CATG | 4 cut(s) | 69, 139, 549, 2158 |
| HspAI | GCGC | 1 cut(s) | 2327 |
| Ksp22I | TGATCA | 1 cut(s) | 114 |
| Kzo9I | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| LmnI | GCTCC | 2 cut(s) | 172, 1031 |
| Lsp1109I | GCAGC | 2 cut(s) | 176, 563 |
| LweI | GCATC | 7 cut(s) | 115, 501, 563, 679, 2151, 2338, 2501 |
| MaeII | ACGT | 1 cut(s) | 2576 |
| MaeIII | GTNAC | 7 cut(s) | 184, 1001, 1111, 1327, 1408, 2125, 2422 |
| MalI | GATC | 9 cut(s) | 18, 90, 116, 427, 969, 1199, 1464, 1983, 2251 |
| MboI | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| MflI | RGATCY | 7 cut(s) | 16, 88, 425, 967, 1462, 1981, 2249 |
| MlsI | TGGCCA | 1 cut(s) | 1477 |
| MluNI | TGGCCA | 1 cut(s) | 1477 |
| MlyI | GAGTC | 5 cut(s) | 597, 1529, 1557, 2543, 2571 |
| MmeI | TCCRAC | 2 cut(s) | 1545, 2413 |
| Mox20I | TGGCCA | 1 cut(s) | 1477 |
| Mph1103I | ATGCAT | 1 cut(s) | 262 |
| MroXI | GAANNNNTTC | 2 cut(s) | 750, 1371 |
| MscI | TGGCCA | 1 cut(s) | 1477 |
| MseI | TTAA | 6 cut(s) | 1257, 1298, 1623, 1671, 1826, 2623 |
| MslI | CAYNNNNRTG | 1 cut(s) | 110 |
| Msp20I | TGGCCA | 1 cut(s) | 1477 |
| MspA1I | CMGCKG | 1 cut(s) | 1246 |
| MspCI | CTTAAG | 1 cut(s) | 1256 |
| MspI | CCGG | 5 cut(s) | 996, 1016, 1223, 1398, 2412 |
| MspR9I | CCNGG | 2 cut(s) | 1016, 1017 |
| MvnI | CGCG | 2 cut(s) | 1183, 1938 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1252, 1321, 2324, 2335 |
| NciI | CCSGG | 2 cut(s) | 1016, 1017 |
| NdeI | CATATG | 1 cut(s) | 1887 |
| NdeII | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| NlaIII | CATG | 4 cut(s) | 69, 139, 549, 2158 |
| NlaIV | GGNNCC | 7 cut(s) | 27, 90, 485, 513, 933, 1947, 2018 |
| NmeAIII | GCCGAG | 1 cut(s) | 790 |
| NmuCI | GTSAC | 7 cut(s) | 184, 1001, 1111, 1327, 1408, 2125, 2422 |
| NruI | TCGCGA | 1 cut(s) | 1938 |
| NsbI | TGCGCA | 1 cut(s) | 2328 |
| NsiI | ATGCAT | 1 cut(s) | 262 |
| PaeR7I | CTCGAG | 2 cut(s) | 1517, 2531 |
| PdmI | GAANNNNTTC | 2 cut(s) | 750, 1371 |
| PfeI | GAWTC | 2 cut(s) | 1100, 2114 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 240 |
| PkrI | GCNGC | 2 cut(s) | 166, 578 |
| PleI | GAGTC | 5 cut(s) | 596, 1528, 1556, 2542, 2570 |
| PpsI | GAGTC | 5 cut(s) | 596, 1528, 1556, 2542, 2570 |
| PpuMI | RGGWCCY | 3 cut(s) | 26, 484, 2017 |
| PsiI | TTATAA | 1 cut(s) | 228 |
| Psp5II | RGGWCCY | 3 cut(s) | 26, 484, 2017 |
| PspN4I | GGNNCC | 7 cut(s) | 27, 90, 485, 513, 933, 1947, 2018 |
| PspPI | GGNCC | 5 cut(s) | 26, 484, 1530, 2017, 2544 |
| PspPPI | RGGWCCY | 3 cut(s) | 26, 484, 2017 |
| PspXI | VCTCGAGB | 2 cut(s) | 1517, 2531 |
| PstNI | CAGNNNCTG | 1 cut(s) | 170 |
| PsuI | RGATCY | 7 cut(s) | 16, 88, 425, 967, 1462, 1981, 2249 |
| PvuII | CAGCTG | 1 cut(s) | 1246 |
| RruI | TCGCGA | 1 cut(s) | 1938 |
| RsaI | GTAC | 5 cut(s) | 81, 708, 825, 1719, 2058 |
| RsaNI | GTAC | 5 cut(s) | 80, 707, 824, 1718, 2057 |
| RseI | CAYNNNNRTG | 1 cut(s) | 110 |
| SaqAI | TTAA | 6 cut(s) | 1257, 1298, 1623, 1671, 1826, 2623 |
| SatI | GCNGC | 2 cut(s) | 165, 577 |
| Sau3AI | GATC | 9 cut(s) | 16, 88, 114, 425, 967, 1197, 1462, 1981, 2249 |
| Sau96I | GGNCC | 5 cut(s) | 26, 484, 1530, 2017, 2544 |
| SchI | GAGTC | 5 cut(s) | 597, 1529, 1557, 2543, 2571 |
| ScrFI | CCNGG | 2 cut(s) | 1016, 1017 |
| SfaNI | GCATC | 7 cut(s) | 115, 501, 563, 679, 2151, 2338, 2501 |
| Sfr274I | CTCGAG | 2 cut(s) | 1517, 2531 |
| SinI | GGWCC | 3 cut(s) | 26, 484, 2017 |
| SlaI | CTCGAG | 2 cut(s) | 1517, 2531 |
| SmaI | CCCGGG | 1 cut(s) | 1017 |
| SmiI | ATTTAAAT | 1 cut(s) | 1672 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 110 |
| SmlI | CTYRAG | 6 cut(s) | 298, 1139, 1256, 1517, 1660, 2531 |
| SmoI | CTYRAG | 6 cut(s) | 298, 1139, 1256, 1517, 1660, 2531 |
| SsiI | CCGC | 3 cut(s) | 907, 1077, 1482 |
| SspI | AATATT | 3 cut(s) | 211, 583, 1912 |
| StyD4I | CCNGG | 2 cut(s) | 1014, 1015 |
| SwaI | ATTTAAAT | 1 cut(s) | 1672 |
| TaaI | ACNGT | 1 cut(s) | 1264 |
| TaiI | ACGT | 1 cut(s) | 2579 |
| TaqI | TCGA | 8 cut(s) | 354, 591, 638, 1518, 1755, 1854, 2112, 2532 |
| TaqII | GACCGA | 1 cut(s) | 255 |
| TatI | WGTACW | 2 cut(s) | 79, 2056 |
| TfiI | GAWTC | 2 cut(s) | 1100, 2114 |
| Tru1I | TTAA | 6 cut(s) | 1257, 1298, 1623, 1671, 1826, 2623 |
| Tru9I | TTAA | 6 cut(s) | 1257, 1298, 1623, 1671, 1826, 2623 |
| TscAI | CASTG | 5 cut(s) | 834, 874, 1269, 1332, 1342 |
| TseFI | GTSAC | 7 cut(s) | 184, 1001, 1111, 1327, 1408, 2125, 2422 |
| TseI | GCWGC | 2 cut(s) | 164, 576 |
| Tsp45I | GTSAC | 7 cut(s) | 184, 1001, 1111, 1327, 1408, 2125, 2422 |
| TspGWI | ACGGA | 2 cut(s) | 585, 1298 |
| TspMI | CCCGGG | 1 cut(s) | 1015 |
| TspRI | CASTG | 5 cut(s) | 834, 874, 1269, 1332, 1342 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 240 |
| Vha464I | CTTAAG | 1 cut(s) | 1256 |
| VpaK11BI | GGWCC | 3 cut(s) | 26, 484, 2017 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 380 |
| XapI | RAATTY | 7 cut(s) | 793, 890, 1172, 1448, 1502, 2462, 2606 |
| XbaI | TCTAGA | 2 cut(s) | 920, 1468 |
| XhoI | CTCGAG | 2 cut(s) | 1517, 2531 |
| XmaI | CCCGGG | 1 cut(s) | 1015 |
| XmiI | GTMKAC | 1 cut(s) | 1904 |
| XmnI | GAANNNNTTC | 2 cut(s) | 750, 1371 |
| Zsp2I | ATGCAT | 1 cut(s) | 262 |