No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097901 RchiOBHm_Chr3g0492001 |
| rosa_laevigata | RLG00000026535 RLG00000032203 |
| rosa_multiflora | Rmu_co8080046.1_g000001 Rmu_sc0001501.1_g000097 Rmu_sc0005017.1_g000007 Rmu_sc0033460.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00035940 Rroxscaffold_3G00254760 Rroxscaffold_6G00392650 |
| rosa_rugosa | Rorug07G0277500 Rorug07G0277700 |
| rosa_samantha | Rh3AG301300 Rh3AG301400 Rh3BG337300 Rh3CG334500 Rh3CG334600 Rh3CG334700 Rh3DG336800 Rh5AG121500 Rh5BG119900 Rh5DG119100 Rh5DG242800 Rh7AG432700 Rh7BG405500 Rh7BG405600 Rh7CG452000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3 |
| Acc36I | ACCTGC | 1 cut(s) | 3 |
| AciI | CCGC | 1 cut(s) | 138 |
| AdeI | CACNNNGTG | 1 cut(s) | 99 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 168 |
| AjnI | CCWGG | 1 cut(s) | 161 |
| Alw26I | GTCTC | 2 cut(s) | 104, 235 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 103, 135, 137, 169 |
| AspLEI | GCGC | 1 cut(s) | 80 |
| AsuC2I | CCSGG | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 1 cut(s) | 85 |
| BccI | CCATC | 1 cut(s) | 118 |
| BciT130I | CCWGG | 1 cut(s) | 163 |
| BcnI | CCSGG | 1 cut(s) | 97 |
| BcoDI | GTCTC | 2 cut(s) | 104, 235 |
| BfuAI | ACCTGC | 1 cut(s) | 3 |
| BisI | GCNGC | 1 cut(s) | 139 |
| BlsI | GCNGC | 1 cut(s) | 140 |
| Bme1390I | CCNGG | 2 cut(s) | 97, 163 |
| BmiI | GGNNCC | 2 cut(s) | 142, 160 |
| BmrFI | CCNGG | 2 cut(s) | 97, 163 |
| BpuMI | CCSGG | 1 cut(s) | 97 |
| BsaJI | CCNNGG | 1 cut(s) | 187 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 168 |
| Bse1I | ACTGG | 1 cut(s) | 132 |
| Bse3DI | GCAATG | 1 cut(s) | 111 |
| BseBI | CCWGG | 1 cut(s) | 163 |
| BseDI | CCNNGG | 1 cut(s) | 187 |
| BseGI | GGATG | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseMI | GCAATG | 1 cut(s) | 111 |
| BseNI | ACTGG | 1 cut(s) | 132 |
| BseYI | CCCAGC | 1 cut(s) | 65 |
| BsiSI | CCGG | 1 cut(s) | 97 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 2 cut(s) | 104, 235 |
| BspACI | CCGC | 1 cut(s) | 138 |
| BspLI | GGNNCC | 2 cut(s) | 142, 160 |
| BspMI | ACCTGC | 1 cut(s) | 3 |
| BsrDI | GCAATG | 1 cut(s) | 111 |
| BsrI | ACTGG | 1 cut(s) | 132 |
| BssECI | CCNNGG | 1 cut(s) | 187 |
| BssT1I | CCWWGG | 1 cut(s) | 187 |
| Bst2UI | CCWGG | 1 cut(s) | 163 |
| Bst4CI | ACNGT | 1 cut(s) | 115 |
| BstEII | GGTNACC | 1 cut(s) | 91 |
| BstF5I | GGATG | 1 cut(s) | 55 |
| BstHHI | GCGC | 1 cut(s) | 80 |
| BstMAI | GTCTC | 2 cut(s) | 104, 235 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 165, 218 |
| BstNI | CCWGG | 1 cut(s) | 163 |
| BstPI | GGTNACC | 1 cut(s) | 91 |
| BstSCI | CCNGG | 2 cut(s) | 95, 161 |
| BtsCI | GGATG | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 2 cut(s) | 120, 139 |
| BveI | ACCTGC | 1 cut(s) | 3 |
| CfoI | GCGC | 1 cut(s) | 80 |
| CviJI | RGCY | 7 cut(s) | 24, 43, 65, 128, 141, 159, 261 |
| CviKI_1 | RGCY | 7 cut(s) | 24, 43, 65, 128, 141, 159, 261 |
| DraIII | CACNNNGTG | 1 cut(s) | 99 |
| Eco130I | CCWWGG | 1 cut(s) | 187 |
| Eco91I | GGTNACC | 1 cut(s) | 91 |
| EcoO65I | GGTNACC | 1 cut(s) | 91 |
| EcoRII | CCWGG | 1 cut(s) | 161 |
| EcoT14I | CCWWGG | 1 cut(s) | 187 |
| ErhI | CCWWGG | 1 cut(s) | 187 |
| FaiI | YATR | 5 cut(s) | 40, 202, 249, 251, 264 |
| FauNDI | CATATG | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 1 cut(s) | 139 |
| FokI | GGATG | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 1 cut(s) | 139 |
| GlaI | GCGC | 1 cut(s) | 79 |
| GluI | GCNGC | 1 cut(s) | 139 |
| GsaI | CCCAGC | 1 cut(s) | 69 |
| HapII | CCGG | 1 cut(s) | 97 |
| HhaI | GCGC | 1 cut(s) | 80 |
| Hin6I | GCGC | 1 cut(s) | 78 |
| HinP1I | GCGC | 1 cut(s) | 78 |
| HinfI | GANTC | 1 cut(s) | 53 |
| HpaII | CCGG | 1 cut(s) | 97 |
| HphI | GGTGA | 1 cut(s) | 85 |
| Hpy188I | TCNGA | 1 cut(s) | 145 |
| Hpy99I | CGWCG | 2 cut(s) | 149, 152 |
| HpyCH4III | ACNGT | 1 cut(s) | 115 |
| HpyCH4IV | ACGT | 1 cut(s) | 150 |
| HpyCH4V | TGCA | 1 cut(s) | 104 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 165, 218 |
| HpySE526I | ACGT | 1 cut(s) | 150 |
| HspAI | GCGC | 1 cut(s) | 78 |
| LmnI | GCTCC | 2 cut(s) | 146, 164 |
| MaeII | ACGT | 1 cut(s) | 150 |
| MaeIII | GTNAC | 2 cut(s) | 91, 115 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MmeI | TCCRAC | 1 cut(s) | 168 |
| MspI | CCGG | 1 cut(s) | 97 |
| MspR9I | CCNGG | 2 cut(s) | 97, 163 |
| MvaI | CCWGG | 1 cut(s) | 163 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 165, 218 |
| NciI | CCSGG | 1 cut(s) | 97 |
| NdeI | CATATG | 1 cut(s) | 249 |
| NlaIV | GGNNCC | 2 cut(s) | 142, 160 |
| NmuCI | GTSAC | 2 cut(s) | 91, 115 |
| PaqCI | CACCTGC | 1 cut(s) | 3 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 68 |
| PkrI | GCNGC | 1 cut(s) | 140 |
| PleI | GAGTC | 1 cut(s) | 61 |
| PpsI | GAGTC | 1 cut(s) | 61 |
| Psp6I | CCWGG | 1 cut(s) | 161 |
| PspEI | GGTNACC | 1 cut(s) | 91 |
| PspFI | CCCAGC | 1 cut(s) | 65 |
| PspGI | CCWGG | 1 cut(s) | 161 |
| PspN4I | GGNNCC | 2 cut(s) | 142, 160 |
| SatI | GCNGC | 1 cut(s) | 139 |
| SchI | GAGTC | 1 cut(s) | 62 |
| ScrFI | CCNGG | 2 cut(s) | 97, 163 |
| SetI | ASST | 3 cut(s) | 17, 153, 193 |
| SsiI | CCGC | 1 cut(s) | 138 |
| StyD4I | CCNGG | 2 cut(s) | 95, 161 |
| StyI | CCWWGG | 1 cut(s) | 187 |
| TaaI | ACNGT | 1 cut(s) | 115 |
| TaiI | ACGT | 1 cut(s) | 153 |
| TaqI | TCGA | 1 cut(s) | 71 |
| TauI | GCSGC | 1 cut(s) | 141 |
| TscAI | CASTG | 2 cut(s) | 120, 139 |
| TseFI | GTSAC | 2 cut(s) | 91, 115 |
| Tsp45I | GTSAC | 2 cut(s) | 91, 115 |
| TspRI | CASTG | 2 cut(s) | 120, 139 |