Rh3AG301300

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
37122731 .. 37129273
6543 bp
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UTR
Exon/CDS
Intron
Rh3AG301300.1

Sequence Viewer

Length: 309 bp
ATGGTCGTTCTATCCTGTGTAGGAACTGTGCGTTTCAATCTTGATCCTTTCAGCGAGCATAATGACGCTGACCTTTGGGAAGCCCTAGAAAGGGCACATCTAAAGGATGTCATTAGGAGGAATTCCTTAATTTTAAAATTAATTATAGTCTTATTATGCTTAGGGAACTGCAACTCCCGGTGCATATTGTTGCTGGACGCTCATGATGAATTTCTAAAGTCTCAAGCATTATCAAATGCTACAATAAAACAATTTGATTTGGGGGAAGAGGAAGTTGCCGAATTGAGGTCATTGAGGCATGAATCTTAG

Protein Analysis

102

Amino Acids

11.59

Weight (kDa)

5.25

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 38
AcsI RAATTY 2 cut(s) 121, 209
AfiI CCNNNNNNNGG 3 cut(s) 90, 91, 285
AgsI TTSAA 1 cut(s) 37
AloI GAACNNNNNNTCC 2 cut(s) 158, 190
Alw26I GTCTC 1 cut(s) 225
AlwI GGATC 1 cut(s) 38
ApoI RAATTY 2 cut(s) 121, 209
AseI ATTAAT 1 cut(s) 140
AsuC2I CCSGG 1 cut(s) 178
BaeGI GKGCMC 1 cut(s) 97
BcnI CCSGG 1 cut(s) 178
BcoDI GTCTC 1 cut(s) 225
BfaI CTAG 1 cut(s) 86
Bme1390I CCNGG 1 cut(s) 178
BmrFI CCNGG 1 cut(s) 178
Bpu10I CCTNAGC 1 cut(s) 160
BpuEI CTTGAG 1 cut(s) 207
BpuMI CCSGG 1 cut(s) 178
BsaXI ACNNNNNCTCC 2 cut(s) 158, 188
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 91, 285
BseGI GGATG 1 cut(s) 112
BseLI CCNNNNNNNGG 3 cut(s) 90, 91, 285
BseSI GKGCMC 1 cut(s) 97
BsiSI CCGG 1 cut(s) 178
BslI CCNNNNNNNGG 3 cut(s) 90, 91, 285
BsmAI GTCTC 1 cut(s) 225
Bsp1286I GDGCHC 1 cut(s) 97
Bsp143I GATC 1 cut(s) 43
BspHI TCATGA 1 cut(s) 202
BspPI GGATC 1 cut(s) 38
BssMI GATC 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 28
Bst6I CTCTTC 1 cut(s) 261
BstC8I GCNNGC 1 cut(s) 56
BstDEI CTNAG 2 cut(s) 160, 306
BstF5I GGATG 1 cut(s) 112
BstKTI GATC 1 cut(s) 46
BstMAI GTCTC 1 cut(s) 225
BstMBI GATC 1 cut(s) 43
BstSCI CCNGG 1 cut(s) 176
BstSLI GKGCMC 1 cut(s) 97
BtsCI GGATG 1 cut(s) 112
Cac8I GCNNGC 1 cut(s) 56
CciI TCATGA 1 cut(s) 202
CseI GACGC 2 cut(s) 74, 206
CviAII CATG 2 cut(s) 203, 299
CviJI RGCY 1 cut(s) 83
CviKI_1 RGCY 1 cut(s) 83
DdeI CTNAG 2 cut(s) 160, 306
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
DraI TTTAAA 1 cut(s) 135
Eam1104I CTCTTC 1 cut(s) 261
EarI CTCTTC 1 cut(s) 261
EcoRI GAATTC 1 cut(s) 121
FaeI CATG 2 cut(s) 206, 302
FaiI YATR 6 cut(s) 60, 146, 157, 185, 204, 300
FatI CATG 2 cut(s) 202, 298
FokI GGATG 1 cut(s) 119
FspBI CTAG 1 cut(s) 86
HapII CCGG 1 cut(s) 178
HgaI GACGC 2 cut(s) 74, 206
Hin1II CATG 2 cut(s) 206, 302
HinfI GANTC 1 cut(s) 302
HpaII CCGG 1 cut(s) 178
Hpy188III TCNNGA 2 cut(s) 41, 203
HpyCH4III ACNGT 1 cut(s) 28
HpyCH4V TGCA 2 cut(s) 171, 183
HpyF3I CTNAG 2 cut(s) 160, 306
Hsp92II CATG 2 cut(s) 206, 302
Kzo9I GATC 1 cut(s) 43
LpnPI CCDG 3 cut(s) 28, 179, 191
MaeI CTAG 1 cut(s) 86
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MboII GAAGA 1 cut(s) 278
MhlI GDGCHC 1 cut(s) 97
MluCI AATT 7 cut(s) 121, 129, 137, 141, 209, 251, 281
MnlI CCTC 4 cut(s) 111, 262, 279, 288
MseI TTAA 3 cut(s) 128, 134, 140
MspI CCGG 1 cut(s) 178
MspR9I CCNGG 1 cut(s) 178
NciI CCSGG 1 cut(s) 178
NdeII GATC 1 cut(s) 43
NlaIII CATG 2 cut(s) 206, 302
PagI TCATGA 1 cut(s) 202
PfeI GAWTC 1 cut(s) 302
PshBI ATTAAT 1 cut(s) 140
SaqAI TTAA 3 cut(s) 128, 134, 140
Sau3AI GATC 1 cut(s) 43
ScrFI CCNGG 1 cut(s) 178
SduI GDGCHC 1 cut(s) 97
SetI ASST 2 cut(s) 75, 290
SgeI CNNG 9 cut(s) 27, 53, 67, 98, 189, 190, 206, 215, 236
SmlI CTYRAG 1 cut(s) 222
SmoI CTYRAG 1 cut(s) 222
Sse9I AATT 7 cut(s) 121, 129, 137, 141, 209, 251, 281
SspMI CTAG 1 cut(s) 86
StyD4I CCNGG 1 cut(s) 176
TaaI ACNGT 1 cut(s) 28
TasI AATT 7 cut(s) 121, 129, 137, 141, 209, 251, 281
TfiI GAWTC 1 cut(s) 302
Tru1I TTAA 3 cut(s) 128, 134, 140
Tru9I TTAA 3 cut(s) 128, 134, 140
TspDTI ATGAA 1 cut(s) 222
VspI ATTAAT 1 cut(s) 140
XapI RAATTY 2 cut(s) 121, 209
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.