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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097901 RchiOBHm_Chr3g0492001 |
| rosa_laevigata | RLG00000026535 RLG00000032203 |
| rosa_multiflora | Rmu_co8080046.1_g000001 Rmu_sc0001501.1_g000097 Rmu_sc0005017.1_g000007 Rmu_sc0033460.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00035940 Rroxscaffold_3G00254760 Rroxscaffold_6G00392650 |
| rosa_rugosa | Rorug07G0277500 Rorug07G0277700 |
| rosa_samantha | Rh3AG301300 Rh3AG301400 Rh3BG337300 Rh3CG334500 Rh3CG334600 Rh3CG334700 Rh3DG336800 Rh5AG121500 Rh5BG119900 Rh5DG119100 Rh5DG242800 Rh7AG432700 Rh7BG405500 Rh7BG405600 Rh7CG452000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 418 |
| Acc36I | ACCTGC | 1 cut(s) | 418 |
| AciI | CCGC | 1 cut(s) | 189 |
| AcsI | RAATTY | 1 cut(s) | 441 |
| AflIII | ACRYGT | 1 cut(s) | 335 |
| AgsI | TTSAA | 3 cut(s) | 421, 455, 473 |
| AjiI | CACGTC | 1 cut(s) | 336 |
| AluBI | AGCT | 2 cut(s) | 12, 57 |
| AluI | AGCT | 2 cut(s) | 12, 57 |
| Alw26I | GTCTC | 1 cut(s) | 155 |
| ApeKI | GCWGC | 1 cut(s) | 255 |
| ApoI | RAATTY | 1 cut(s) | 441 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 154, 186 |
| AspLEI | GCGC | 1 cut(s) | 429 |
| AsuHPI | GGTGA | 1 cut(s) | 178 |
| BauI | CACGAG | 1 cut(s) | 210 |
| BbsI | GAAGAC | 2 cut(s) | 136, 381 |
| BbvI | GCAGC | 1 cut(s) | 242 |
| BccI | CCATC | 1 cut(s) | 65 |
| BceAI | ACGGC | 1 cut(s) | 214 |
| BcoDI | GTCTC | 1 cut(s) | 155 |
| BfmI | CTRYAG | 1 cut(s) | 63 |
| BfuAI | ACCTGC | 1 cut(s) | 418 |
| BisI | GCNGC | 2 cut(s) | 190, 256 |
| BlsI | GCNGC | 2 cut(s) | 191, 257 |
| BmgBI | CACGTC | 1 cut(s) | 336 |
| BmsI | GCATC | 2 cut(s) | 10, 364 |
| BpiI | GAAGAC | 2 cut(s) | 136, 381 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 41, 73 |
| BpuEI | CTTGAG | 1 cut(s) | 34 |
| BsaWI | WCCGGW | 1 cut(s) | 147 |
| Bse3DI | GCAATG | 3 cut(s) | 355, 394, 436 |
| BseGI | GGATG | 4 cut(s) | 25, 52, 76, 106 |
| BseMI | GCAATG | 3 cut(s) | 355, 394, 436 |
| BseMII | CTCAG | 1 cut(s) | 290 |
| BseXI | GCAGC | 1 cut(s) | 242 |
| BseYI | CCCAGC | 1 cut(s) | 116 |
| BsiSI | CCGG | 2 cut(s) | 148, 246 |
| BsmAI | GTCTC | 1 cut(s) | 155 |
| BsmBI | CGTCTC | 1 cut(s) | 155 |
| Bsp143I | GATC | 2 cut(s) | 361, 433 |
| BspACI | CCGC | 1 cut(s) | 189 |
| BspCNI | CTCAG | 1 cut(s) | 291 |
| BspMAI | CTGCAG | 1 cut(s) | 67 |
| BspMI | ACCTGC | 1 cut(s) | 418 |
| BsrDI | GCAATG | 3 cut(s) | 355, 394, 436 |
| BssMI | GATC | 2 cut(s) | 361, 433 |
| BssSI | CACGAG | 1 cut(s) | 210 |
| Bst2BI | CACGAG | 1 cut(s) | 210 |
| Bst4CI | ACNGT | 1 cut(s) | 166 |
| BstDEI | CTNAG | 1 cut(s) | 299 |
| BstF5I | GGATG | 4 cut(s) | 25, 52, 76, 106 |
| BstHHI | GCGC | 1 cut(s) | 429 |
| BstKTI | GATC | 2 cut(s) | 364, 436 |
| BstMAI | GTCTC | 1 cut(s) | 155 |
| BstMBI | GATC | 2 cut(s) | 361, 433 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 198 |
| BstSFI | CTRYAG | 1 cut(s) | 63 |
| BstV1I | GCAGC | 1 cut(s) | 242 |
| BstV2I | GAAGAC | 2 cut(s) | 136, 381 |
| BtrI | CACGTC | 1 cut(s) | 336 |
| BtsCI | GGATG | 4 cut(s) | 25, 52, 76, 106 |
| BtsIMutI | CAGTG | 1 cut(s) | 190 |
| BveI | ACCTGC | 1 cut(s) | 418 |
| CfoI | GCGC | 1 cut(s) | 429 |
| CviAII | CATG | 2 cut(s) | 343, 403 |
| CviJI | RGCY | 7 cut(s) | 12, 57, 75, 116, 192, 209, 296 |
| CviKI_1 | RGCY | 7 cut(s) | 12, 57, 75, 116, 192, 209, 296 |
| DdeI | CTNAG | 1 cut(s) | 299 |
| DpnI | GATC | 2 cut(s) | 363, 435 |
| DpnII | GATC | 2 cut(s) | 361, 433 |
| Eco32I | GATATC | 1 cut(s) | 181 |
| EcoRV | GATATC | 1 cut(s) | 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 379 |
| Esp3I | CGTCTC | 1 cut(s) | 155 |
| FaeI | CATG | 2 cut(s) | 346, 406 |
| FaiI | YATR | 7 cut(s) | 91, 253, 306, 344, 379, 404, 464 |
| FatI | CATG | 2 cut(s) | 342, 402 |
| Fnu4HI | GCNGC | 2 cut(s) | 190, 256 |
| FokI | GGATG | 4 cut(s) | 32, 59, 83, 113 |
| Fsp4HI | GCNGC | 2 cut(s) | 190, 256 |
| GlaI | GCGC | 1 cut(s) | 428 |
| GluI | GCNGC | 2 cut(s) | 190, 256 |
| GsaI | CCCAGC | 1 cut(s) | 120 |
| HapII | CCGG | 2 cut(s) | 148, 246 |
| HhaI | GCGC | 1 cut(s) | 429 |
| Hin1II | CATG | 2 cut(s) | 346, 406 |
| Hin6I | GCGC | 1 cut(s) | 427 |
| HinP1I | GCGC | 1 cut(s) | 427 |
| HindIII | AAGCTT | 1 cut(s) | 10 |
| HinfI | GANTC | 2 cut(s) | 386, 469 |
| HpaII | CCGG | 2 cut(s) | 148, 246 |
| HphI | GGTGA | 1 cut(s) | 178 |
| Hpy188I | TCNGA | 2 cut(s) | 220, 300 |
| Hpy188III | TCNNGA | 3 cut(s) | 123, 311, 359 |
| Hpy99I | CGWCG | 1 cut(s) | 337 |
| HpyCH4III | ACNGT | 1 cut(s) | 166 |
| HpyCH4IV | ACGT | 1 cut(s) | 335 |
| HpyCH4V | TGCA | 8 cut(s) | 23, 65, 258, 348, 377, 399, 413, 448 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 198 |
| HpyF3I | CTNAG | 1 cut(s) | 299 |
| HpySE526I | ACGT | 1 cut(s) | 335 |
| Hsp92II | CATG | 2 cut(s) | 346, 406 |
| HspAI | GCGC | 1 cut(s) | 427 |
| Kzo9I | GATC | 2 cut(s) | 361, 433 |
| LpnPI | CCDG | 8 cut(s) | 13, 93, 102, 117, 161, 259, 296, 423 |
| Lsp1109I | GCAGC | 1 cut(s) | 242 |
| LweI | GCATC | 2 cut(s) | 10, 364 |
| MaeII | ACGT | 1 cut(s) | 335 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MalI | GATC | 2 cut(s) | 363, 435 |
| MboI | GATC | 2 cut(s) | 361, 433 |
| MboII | GAAGA | 2 cut(s) | 136, 381 |
| MluCI | AATT | 3 cut(s) | 259, 273, 441 |
| MlyI | GAGTC | 1 cut(s) | 395 |
| MnlI | CCTC | 5 cut(s) | 9, 43, 61, 286, 316 |
| Mph1103I | ATGCAT | 1 cut(s) | 379 |
| MseI | TTAA | 1 cut(s) | 368 |
| MspI | CCGG | 2 cut(s) | 148, 246 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 198 |
| NdeII | GATC | 2 cut(s) | 361, 433 |
| NlaIII | CATG | 2 cut(s) | 346, 406 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| NsiI | ATGCAT | 1 cut(s) | 379 |
| PaqCI | CACCTGC | 1 cut(s) | 418 |
| PfeI | GAWTC | 1 cut(s) | 469 |
| PkrI | GCNGC | 2 cut(s) | 191, 257 |
| PleI | GAGTC | 1 cut(s) | 394 |
| PpsI | GAGTC | 1 cut(s) | 394 |
| PspFI | CCCAGC | 1 cut(s) | 116 |
| PstI | CTGCAG | 1 cut(s) | 67 |
| SaqAI | TTAA | 1 cut(s) | 368 |
| SatI | GCNGC | 2 cut(s) | 190, 256 |
| Sau3AI | GATC | 2 cut(s) | 361, 433 |
| SchI | GAGTC | 1 cut(s) | 395 |
| SetI | ASST | 4 cut(s) | 14, 59, 338, 412 |
| SfaNI | GCATC | 2 cut(s) | 10, 364 |
| SfcI | CTRYAG | 1 cut(s) | 63 |
| SmlI | CTYRAG | 1 cut(s) | 13 |
| SmoI | CTYRAG | 1 cut(s) | 13 |
| Sse9I | AATT | 3 cut(s) | 259, 273, 441 |
| SsiI | CCGC | 1 cut(s) | 189 |
| TaaI | ACNGT | 1 cut(s) | 166 |
| TaiI | ACGT | 1 cut(s) | 338 |
| TaqI | TCGA | 1 cut(s) | 332 |
| TasI | AATT | 3 cut(s) | 259, 273, 441 |
| TauI | GCSGC | 1 cut(s) | 192 |
| TfiI | GAWTC | 1 cut(s) | 469 |
| Tru1I | TTAA | 1 cut(s) | 368 |
| Tru9I | TTAA | 1 cut(s) | 368 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 255 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspGWI | ACGGA | 1 cut(s) | 173 |
| TspRI | CASTG | 1 cut(s) | 190 |
| XapI | RAATTY | 1 cut(s) | 441 |
| Zsp2I | ATGCAT | 1 cut(s) | 379 |